RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 C3AR1Q16581 482 aa12.43□□□□□ -0.42
UBR4-210ENST00000466969 AGAP7PQ5VUJ5 663 aa12.43□□□□□ -0.42
UBR4-210ENST00000466969 IRAK1BP1Q5VVH5 260 aa12.43□□□□□ -0.42
UBR4-210ENST00000466969 LCN10Q6JVE6 187 aa12.43□□□□□ -0.42
UBR4-210ENST00000466969 BRAT1Q6PJG6 821 aa12.43□□□□□ -0.42
UBR4-210ENST00000466969 IGFL2Q6UWQ7 119 aa12.43□□□□□ -0.42
UBR4-210ENST00000466969 FAM92BQ6ZTR7 304 aa12.43□□□□□ -0.42
UBR4-210ENST00000466969 INTS8Q75QN2 995 aaKnown RBP12.43□□□□□ -0.42
UBR4-210ENST00000466969 CAMKMTQ7Z624 323 aa12.43□□□□□ -0.42
UBR4-210ENST00000466969 DRC7Q8IY82 874 aa12.43□□□□□ -0.42
UBR4-210ENST00000466969 ZNF683Q8IZ20 524 aa12.43□□□□□ -0.42
UBR4-210ENST00000466969 DEFB106AQ8N104 65 aa12.43□□□□□ -0.42
UBR4-210ENST00000466969 DNAAF3Q8N9W5 541 aa12.43□□□□□ -0.42
UBR4-210ENST00000466969 FBXL13Q8NEE6 735 aa12.43□□□□□ -0.42
UBR4-210ENST00000466969 TMEM174Q8WUU8 243 aa12.43□□□□□ -0.42
UBR4-210ENST00000466969 RMND5BQ96G75 393 aaPredicted RBP12.43□□□□□ -0.42
UBR4-210ENST00000466969 ZNF514Q96K75 400 aaPredicted RBP12.43□□□□□ -0.42
UBR4-210ENST00000466969 LRFN5Q96NI6 719 aa12.43□□□□□ -0.42
UBR4-210ENST00000466969 AGAP4Q96P64 663 aa12.43□□□□□ -0.42
UBR4-210ENST00000466969 HERPUD2Q9BSE4 406 aa12.43□□□□□ -0.42
UBR4-210ENST00000466969 TKTL2Q9H0I9 626 aa12.43□□□□□ -0.42
UBR4-210ENST00000466969 LIME1Q9H400 295 aa12.43□□□□□ -0.42
UBR4-210ENST00000466969 SUV39H2Q9H5I1 410 aa12.43□□□□□ -0.42
UBR4-210ENST00000466969 STMN3Q9NZ72 180 aa12.43□□□□□ -0.42
UBR4-210ENST00000466969 CPNE7Q9UBL6 633 aa12.43□□□□□ -0.42
UBR4-210ENST00000466969 TINAGQ9UJW2 476 aa12.43□□□□□ -0.42
UBR4-210ENST00000466969 SNX10Q9Y5X0 201 aa12.43□□□□□ -0.42
UBR4-210ENST00000466969 KIR2DS5A0A0G2JLQ3 304 aa12.42□□□□□ -0.42
UBR4-210ENST00000466969 A0A0G2JNG1 304 aa12.42□□□□□ -0.42
UBR4-210ENST00000466969 TSPAN11A1L157 253 aa12.42□□□□□ -0.42
UBR4-210ENST00000466969 CCDC78A2IDD5 438 aa12.42□□□□□ -0.42
UBR4-210ENST00000466969 GOLGA6CA6NDK9 693 aa12.42□□□□□ -0.42
UBR4-210ENST00000466969 GOLGA6BA6NDN3 693 aa12.42□□□□□ -0.42
UBR4-210ENST00000466969 KIR2DS3K7RE56 304 aa12.42□□□□□ -0.42
UBR4-210ENST00000466969 SRGAP2O75044 1071 aa12.42□□□□□ -0.42
UBR4-210ENST00000466969 PAEPP09466 180 aa12.42□□□□□ -0.42
UBR4-210ENST00000466969 GOLGA6DP0CG33 693 aa12.42□□□□□ -0.42
UBR4-210ENST00000466969 SPAM1P38567 509 aa12.42□□□□□ -0.42
UBR4-210ENST00000466969 ARL4DP49703 201 aa12.42□□□□□ -0.42
UBR4-210ENST00000466969 RHOAP61586 193 aa12.42□□□□□ -0.42
UBR4-210ENST00000466969 KCNAB1Q14722 419 aa12.42□□□□□ -0.42
UBR4-210ENST00000466969 KIR2DS5Q14953 304 aa12.42□□□□□ -0.42
UBR4-210ENST00000466969 GALNT13Q8IUC8 556 aa12.42□□□□□ -0.42
UBR4-210ENST00000466969 DSELQ8IZU8 1212 aa12.42□□□□□ -0.42
UBR4-210ENST00000466969 PDILTQ8N807 584 aa12.42□□□□□ -0.42
UBR4-210ENST00000466969 OR1N1Q8NGS0 311 aa12.42□□□□□ -0.42
UBR4-210ENST00000466969 NUS1Q96E22 293 aa12.42□□□□□ -0.42
UBR4-210ENST00000466969 CLIC6Q96NY7 704 aa12.42□□□□□ -0.42
UBR4-210ENST00000466969 WDCPQ9H6R7 721 aa12.42□□□□□ -0.42
UBR4-210ENST00000466969 GOLGA6AQ9NYA3 693 aa12.42□□□□□ -0.42
UBR4-210ENST00000466969 ANK2Q01484 3957 aa12.42□□□□□ -0.42
UBR4-210ENST00000466969 TLN2Q9Y4G6 2542 aa12.41□□□□□ -0.42
UBR4-210ENST00000466969 IGLV3-10A0A075B6K4 115 aa12.41□□□□□ -0.42
UBR4-210ENST00000466969 INSIG1O15503 277 aa12.41□□□□□ -0.42
UBR4-210ENST00000466969 LDB2O43679 373 aa12.41□□□□□ -0.42
UBR4-210ENST00000466969 TMCC1O94876 653 aa12.41□□□□□ -0.42
UBR4-210ENST00000466969 SIX3O95343 332 aaPredicted RBP12.41□□□□□ -0.42
UBR4-210ENST00000466969 IGFBP2P18065 325 aa12.41□□□□□ -0.42
UBR4-210ENST00000466969 BRD2P25440 801 aaKnown RBP12.41□□□□□ -0.42
UBR4-210ENST00000466969 RPL34P49207 117 aaKnown RBP12.41□□□□□ -0.42
UBR4-210ENST00000466969 DMPKQ09013 629 aa12.41□□□□□ -0.42
UBR4-210ENST00000466969 RALGDSQ12967 914 aa12.41□□□□□ -0.42
UBR4-210ENST00000466969 SSPNQ14714 243 aa12.41□□□□□ -0.42
UBR4-210ENST00000466969 GRM3Q14832 879 aa12.41□□□□□ -0.42
UBR4-210ENST00000466969 INAQ16352 499 aa12.41□□□□□ -0.42
UBR4-210ENST00000466969 PYCR3Q53H96 274 aa12.41□□□□□ -0.42
UBR4-210ENST00000466969 PLEKHS1Q5SXH7 462 aa12.41□□□□□ -0.42
UBR4-210ENST00000466969 ACBD5Q5T8D3 534 aaPredicted RBP12.41□□□□□ -0.42
UBR4-210ENST00000466969 IRGCQ6NXR0 463 aa12.41□□□□□ -0.42
UBR4-210ENST00000466969 UNC13DQ70J99 1090 aa12.41□□□□□ -0.42
UBR4-210ENST00000466969 MARK2Q7KZI7 788 aaKnown RBP12.41□□□□□ -0.42
UBR4-210ENST00000466969 PAF1Q8N7H5 531 aa12.41□□□□□ -0.42
UBR4-210ENST00000466969 SLC38A9Q8NBW4 561 aa12.41□□□□□ -0.42
UBR4-210ENST00000466969 EPS8L1Q8TE68 723 aa12.41□□□□□ -0.42
UBR4-210ENST00000466969 CPT1BQ92523 772 aa12.41□□□□□ -0.42
UBR4-210ENST00000466969 UBXN4Q92575 508 aa12.41□□□□□ -0.42
UBR4-210ENST00000466969 MBD6Q96DN6 1003 aa12.41□□□□□ -0.42
UBR4-210ENST00000466969 CLIP3Q96DZ5 547 aa12.41□□□□□ -0.42
UBR4-210ENST00000466969 SCARF2Q96GP6 870 aaPredicted RBP12.41□□□□□ -0.42
UBR4-210ENST00000466969 NDC1Q9BTX1 674 aa12.41□□□□□ -0.42
UBR4-210ENST00000466969 POLDIP3Q9BY77 421 aaKnown RBP12.41□□□□□ -0.42
UBR4-210ENST00000466969 UCK1Q9HA47 277 aa12.41□□□□□ -0.42
UBR4-210ENST00000466969 KCND1Q9NSA2 647 aa12.41□□□□□ -0.42
UBR4-210ENST00000466969 P4HTMQ9NXG6 502 aa12.41□□□□□ -0.42
UBR4-210ENST00000466969 TBC1D29Q9UFV1 150 aa12.41□□□□□ -0.42
UBR4-210ENST00000466969 MEMO1Q9Y316 297 aa12.41□□□□□ -0.42
UBR4-210ENST00000466969 INTS1Q8N201 2190 aaKnown RBP12.4□□□□□ -0.42
UBR4-210ENST00000466969 OR5K4A6NMS3 321 aa12.4□□□□□ -0.42
UBR4-210ENST00000466969 C9J4A7 227 aa12.4□□□□□ -0.42
UBR4-210ENST00000466969 MAPK13O15264 365 aa12.4□□□□□ -0.42
UBR4-210ENST00000466969 SNX2O60749 519 aa12.4□□□□□ -0.42
UBR4-210ENST00000466969 GADD45BO75293 160 aaPredicted RBP12.4□□□□□ -0.42
UBR4-210ENST00000466969 EBLN1P0CF75 366 aa12.4□□□□□ -0.42
UBR4-210ENST00000466969 GTF2H1P32780 548 aa12.4□□□□□ -0.42
UBR4-210ENST00000466969 HADHAP40939 763 aa12.4□□□□□ -0.42
UBR4-210ENST00000466969 MXI1P50539 228 aa12.4□□□□□ -0.42
UBR4-210ENST00000466969 MARSP56192 900 aaKnown RBP12.4□□□□□ -0.42
UBR4-210ENST00000466969 AIMP2Q13155 320 aaKnown RBP12.4□□□□□ -0.42
UBR4-210ENST00000466969 NCF4Q15080 339 aa12.4□□□□□ -0.42
UBR4-210ENST00000466969 TAF5Q15542 800 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms