RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 TRBV23OR9-2A0A075B6M9 112 aa8.68□□□□□ -1.02
HPS4-209ENST00000466781 BTN3A3O00478 584 aa8.68□□□□□ -1.02
HPS4-209ENST00000466781 TREHO43280 583 aa8.68□□□□□ -1.02
HPS4-209ENST00000466781 RSL1D1O76021 490 aaKnown RBP8.68□□□□□ -1.02
HPS4-209ENST00000466781 CYB5AP00167 134 aa8.68□□□□□ -1.02
HPS4-209ENST00000466781 TSPAN8P19075 237 aa8.68□□□□□ -1.02
HPS4-209ENST00000466781 OGNP20774 298 aaKnown RBP8.68□□□□□ -1.02
HPS4-209ENST00000466781 ADSSP30520 456 aa8.68□□□□□ -1.02
HPS4-209ENST00000466781 USP4Q13107 963 aa8.68□□□□□ -1.02
HPS4-209ENST00000466781 ECM1Q16610 540 aa8.68□□□□□ -1.02
HPS4-209ENST00000466781 CPTPQ5TA50 214 aa8.68□□□□□ -1.02
HPS4-209ENST00000466781 SPESP1Q6UW49 350 aa8.68□□□□□ -1.02
HPS4-209ENST00000466781 TSHZ1Q6ZSZ6 1077 aa8.68□□□□□ -1.02
HPS4-209ENST00000466781 SLC24A5Q71RS6 500 aa8.68□□□□□ -1.02
HPS4-209ENST00000466781 NPAS4Q8IUM7 802 aa8.68□□□□□ -1.02
HPS4-209ENST00000466781 CADM2Q8N3J6 435 aa8.68□□□□□ -1.02
HPS4-209ENST00000466781 HDDC3Q8N4P3 179 aa8.68□□□□□ -1.02
HPS4-209ENST00000466781 ZBTB2Q8N680 514 aa8.68□□□□□ -1.02
HPS4-209ENST00000466781 OR2L5Q8NG80 312 aa8.68□□□□□ -1.02
HPS4-209ENST00000466781 OR7A2PQ8NGA2 310 aa8.68□□□□□ -1.02
HPS4-209ENST00000466781 HIST1H2AAQ96QV6 131 aa8.68□□□□□ -1.02
HPS4-209ENST00000466781 DUSP16Q9BY84 665 aa8.68□□□□□ -1.02
HPS4-209ENST00000466781 GGA2Q9UJY4 613 aa8.68□□□□□ -1.02
HPS4-209ENST00000466781 DERAQ9Y315 318 aa8.68□□□□□ -1.02
HPS4-209ENST00000466781 PCDHA2Q9Y5H9 948 aa8.68□□□□□ -1.02
HPS4-209ENST00000466781 A0A0X1KG70 313 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 A0A1W2PQ72 361 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 SIN3BO75182 1162 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 CLDN11O75508 207 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 ADRB2P07550 413 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 ZSCAN5DPP0CG00 497 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 PRKAR1AP10644 381 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 CORO1AP31146 461 aaKnown RBP8.67□□□□□ -1.02
HPS4-209ENST00000466781 MNDAP41218 407 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 FOXM1Q08050 763 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 ZIK1Q3SY52 487 aaPredicted RBP8.67□□□□□ -1.02
HPS4-209ENST00000466781 LIPMQ5VYY2 423 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 DUPD1Q68J44 220 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 MSANTD2Q6P1R3 559 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 PGBD2Q6P3X8 592 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 C1orf186Q6ZWK4 172 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 LRP10Q7Z4F1 713 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 UNC5BQ8IZJ1 945 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 CFAP52Q8N1V2 620 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 SPPL2BQ8TCT7 592 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 LRRN4Q8WUT4 740 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 ZBTB10Q96DT7 871 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 ERVK-11Q9UQG0 969 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 DLG5Q8TDM6 1919 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 GATBO75879 557 aaKnown RBP8.67□□□□□ -1.02
HPS4-209ENST00000466781 FSBPO95073 299 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 DUSP4Q13115 394 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 MINDY4Q4G0A6 757 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 CERCAMQ5T4B2 595 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 MON1AQ86VX9 555 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 SLC43A3Q8NBI5 491 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 HAS1Q92839 578 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 COX4I2Q96KJ9 171 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 ANKRD27Q96NW4 1050 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 RNF157Q96PX1 679 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 RNF121Q9H920 327 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 PCDHGA3Q9Y5H0 932 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 A0A1W2PQ67 120 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 WRBO00258 174 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 TRIM38O00635 465 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 TP73O15350 636 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 PLIN3O60664 434 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 TRBC1P01850 177 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 CYP1A2P05177 515 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 IDO1P14902 403 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 ERCC2P18074 760 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 ITPKAP23677 461 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 SPAM1P38567 509 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 LBX1P52954 281 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 UBXN2BQ14CS0 331 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 ZMYND11Q15326 602 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 RFX4Q33E94 735 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 RFTN2Q52LD8 501 aaPredicted RBP8.67□□□□□ -1.02
HPS4-209ENST00000466781 IRGCQ6NXR0 463 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 ABRAXAS1Q6UWZ7 409 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 ABHD15Q6UXT9 468 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 SAPCD2Q86UD0 394 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 HERVK_113Q902F9 699 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 PMEPA1Q969W9 287 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 MCRS1Q96EZ8 462 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 IL12RB2Q99665 862 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 FAM192AQ9GZU8 254 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 CHST7Q9NS84 486 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 PCDHB1Q9Y5F3 818 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 SOWAHBA6NEL2 793 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 TRIM64A6NGJ6 449 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 HAT1O14929 419 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 PGRMC2O15173 223 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 LIASO43766 372 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 PSIP1O75475 530 aaKnown RBP8.67□□□□□ -1.02
HPS4-209ENST00000466781 SAGP10523 405 aaPredicted RBP8.67□□□□□ -1.02
HPS4-209ENST00000466781 COX4I1P13073 169 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 SYN1P17600 705 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 TCEA1P23193 301 aaKnown RBP8.67□□□□□ -1.02
HPS4-209ENST00000466781 PDHA2P29803 388 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms