RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 DDX47Q9H0S4 455 aaKnown RBP20.17■□□□□ 0.82
SKA3-205ENST00000465471 PIH1D1Q9NWS0 290 aaKnown RBP20.17■□□□□ 0.82
SKA3-205ENST00000465471 NLGN3Q9NZ94 848 aa20.17■□□□□ 0.82
SKA3-205ENST00000465471 VPS18Q9P253 973 aa20.17■□□□□ 0.82
SKA3-205ENST00000465471 NEMP2A6NFY4 417 aa20.16■□□□□ 0.82
SKA3-205ENST00000465471 MROH6A6NGR9 719 aa20.16■□□□□ 0.82
SKA3-205ENST00000465471 LMO7DNF2Z398 122 aa20.16■□□□□ 0.82
SKA3-205ENST00000465471 TRIM38O00635 465 aa20.16■□□□□ 0.82
SKA3-205ENST00000465471 TNFP01375 233 aa20.16■□□□□ 0.82
SKA3-205ENST00000465471 POLD2P49005 469 aa20.16■□□□□ 0.82
SKA3-205ENST00000465471 LMAN1P49257 510 aa20.16■□□□□ 0.82
SKA3-205ENST00000465471 XIAPP98170 497 aa20.16■□□□□ 0.82
SKA3-205ENST00000465471 CDK16Q00536 496 aa20.16■□□□□ 0.82
SKA3-205ENST00000465471 GPS1Q13098 491 aa20.16■□□□□ 0.82
SKA3-205ENST00000465471 POU6F1Q14863 301 aa20.16■□□□□ 0.82
SKA3-205ENST00000465471 ATP13A5Q4VNC0 1218 aa20.16■□□□□ 0.82
SKA3-205ENST00000465471 PSAPL1Q6NUJ1 521 aa20.16■□□□□ 0.82
SKA3-205ENST00000465471 ZNF534Q76KX8 674 aa20.16■□□□□ 0.82
SKA3-205ENST00000465471 EID2Q8N6I1 236 aa20.16■□□□□ 0.82
SKA3-205ENST00000465471 OR13C4Q8NGS5 318 aa20.16■□□□□ 0.82
SKA3-205ENST00000465471 LMX1AQ8TE12 382 aa20.16■□□□□ 0.82
SKA3-205ENST00000465471 GLYATL1Q969I3 302 aa20.16■□□□□ 0.82
SKA3-205ENST00000465471 RANBP9Q96S59 729 aa20.16■□□□□ 0.82
SKA3-205ENST00000465471 CDC6Q99741 560 aa20.16■□□□□ 0.82
SKA3-205ENST00000465471 CYP4F12Q9HCS2 524 aa20.16■□□□□ 0.82
SKA3-205ENST00000465471 SMOXQ9NWM0 555 aa20.16■□□□□ 0.82
SKA3-205ENST00000465471 GLYATL1P3A0A0U1RQE8 302 aa20.15■□□□□ 0.82
SKA3-205ENST00000465471 H7C0S8 307 aa20.15■□□□□ 0.82
SKA3-205ENST00000465471 CCDC188H7C350 402 aa20.15■□□□□ 0.82
SKA3-205ENST00000465471 TPP1O14773 563 aa20.15■□□□□ 0.82
SKA3-205ENST00000465471 ECEL1O95672 775 aa20.15■□□□□ 0.82
SKA3-205ENST00000465471 GAS8O95995 478 aa20.15■□□□□ 0.82
SKA3-205ENST00000465471 CELA2BP08218 269 aaPredicted RBP20.15■□□□□ 0.82
SKA3-205ENST00000465471 PAFAH1B1P43034 410 aa20.15■□□□□ 0.82
SKA3-205ENST00000465471 PTGIRP43119 386 aa20.15■□□□□ 0.82
SKA3-205ENST00000465471 TRIP6Q15654 476 aaKnown RBP20.15■□□□□ 0.82
SKA3-205ENST00000465471 CHRNA6Q15825 494 aa20.15■□□□□ 0.82
SKA3-205ENST00000465471 PROX2Q3B8N5 592 aa20.15■□□□□ 0.82
SKA3-205ENST00000465471 PPM1JQ5JR12 505 aa20.15■□□□□ 0.82
SKA3-205ENST00000465471 FAM151BQ6UXP7 276 aa20.15■□□□□ 0.82
SKA3-205ENST00000465471 PPP1R21Q6ZMI0 780 aa20.15■□□□□ 0.82
SKA3-205ENST00000465471 DGLUCYQ7Z3D6 616 aa20.15■□□□□ 0.82
SKA3-205ENST00000465471 RD3Q7Z3Z2 195 aa20.15■□□□□ 0.82
SKA3-205ENST00000465471 SDR16C5Q8N3Y7 309 aa20.15■□□□□ 0.82
SKA3-205ENST00000465471 DNAAF3Q8N9W5 541 aa20.15■□□□□ 0.82
SKA3-205ENST00000465471 CPT1BQ92523 772 aa20.15■□□□□ 0.82
SKA3-205ENST00000465471 C16orf45Q96MC5 204 aaPredicted RBP20.15■□□□□ 0.82
SKA3-205ENST00000465471 CARS2Q9HA77 564 aaKnown RBP20.15■□□□□ 0.82
SKA3-205ENST00000465471 FKBPLQ9UIM3 349 aa20.15■□□□□ 0.82
SKA3-205ENST00000465471 SUFUQ9UMX1 484 aa20.15■□□□□ 0.82
SKA3-205ENST00000465471 TMEM98Q9Y2Y6 226 aa20.15■□□□□ 0.82
SKA3-205ENST00000465471 TCRBV7S3A2A0A539 114 aa20.14■□□□□ 0.81
SKA3-205ENST00000465471 AGAP14A8MT82 685 aa20.14■□□□□ 0.81
SKA3-205ENST00000465471 DNAJC6O75061 913 aa20.14■□□□□ 0.81
SKA3-205ENST00000465471 CA5AP35218 305 aa20.14■□□□□ 0.81
SKA3-205ENST00000465471 VPS41P49754 854 aa20.14■□□□□ 0.81
SKA3-205ENST00000465471 C1orf61Q13536 156 aa20.14■□□□□ 0.81
SKA3-205ENST00000465471 PTK6Q13882 451 aa20.14■□□□□ 0.81
SKA3-205ENST00000465471 ELOCQ15369 112 aa20.14■□□□□ 0.81
SKA3-205ENST00000465471 CERCAMQ5T4B2 595 aa20.14■□□□□ 0.81
SKA3-205ENST00000465471 DOK6Q6PKX4 331 aa20.14■□□□□ 0.81
SKA3-205ENST00000465471 PHYKPLQ8IUZ5 450 aa20.14■□□□□ 0.81
SKA3-205ENST00000465471 FAM181AQ8N9Y4 354 aa20.14■□□□□ 0.81
SKA3-205ENST00000465471 DNAJC1Q96KC8 554 aaKnown RBP20.14■□□□□ 0.81
SKA3-205ENST00000465471 DUSP23Q9BVJ7 150 aa20.14■□□□□ 0.81
SKA3-205ENST00000465471 TMEM168Q9H0V1 697 aa20.14■□□□□ 0.81
SKA3-205ENST00000465471 NLE1Q9NVX2 485 aaPredicted RBP20.14■□□□□ 0.81
SKA3-205ENST00000465471 TRNAU1APQ9NX07 287 aaKnown RBP20.14■□□□□ 0.81
SKA3-205ENST00000465471 TOR4AQ9NXH8 423 aa20.14■□□□□ 0.81
SKA3-205ENST00000465471 FTSJ1Q9UET6 329 aa20.14■□□□□ 0.81
SKA3-205ENST00000465471 APPL1Q9UKG1 709 aa20.14■□□□□ 0.81
SKA3-205ENST00000465471 RIMKLBQ9ULI2 386 aa20.14■□□□□ 0.81
SKA3-205ENST00000465471 LY6G6EA0A0G2JKS1 128 aa20.13■□□□□ 0.81
SKA3-205ENST00000465471 FFAR2O15552 330 aa20.13■□□□□ 0.81
SKA3-205ENST00000465471 GPR39O43194 453 aa20.13■□□□□ 0.81
SKA3-205ENST00000465471 TNFSF14O43557 240 aa20.13■□□□□ 0.81
SKA3-205ENST00000465471 SIGLEC6O43699 453 aa20.13■□□□□ 0.81
SKA3-205ENST00000465471 DKK1O94907 266 aa20.13■□□□□ 0.81
SKA3-205ENST00000465471 SLC25A14O95258 325 aaPredicted RBP20.13■□□□□ 0.81
SKA3-205ENST00000465471 PRAMEF1O95521 474 aa20.13■□□□□ 0.81
SKA3-205ENST00000465471 ALPPL2P10696 532 aa20.13■□□□□ 0.81
SKA3-205ENST00000465471 HADHAP40939 763 aa20.13■□□□□ 0.81
SKA3-205ENST00000465471 PEX6Q13608 980 aa20.13■□□□□ 0.81
SKA3-205ENST00000465471 ITGA9Q13797 1035 aa20.13■□□□□ 0.81
SKA3-205ENST00000465471 KHDC1Q4VXA5 237 aaKnown RBP20.13■□□□□ 0.81
SKA3-205ENST00000465471 PYCR3Q53H96 274 aa20.13■□□□□ 0.81
SKA3-205ENST00000465471 ANKRD22Q5VYY1 191 aa20.13■□□□□ 0.81
SKA3-205ENST00000465471 LVRNQ6Q4G3 990 aa20.13■□□□□ 0.81
SKA3-205ENST00000465471 DDHD1Q8NEL9 900 aa20.13■□□□□ 0.81
SKA3-205ENST00000465471 GPBAR1Q8TDU6 330 aa20.13■□□□□ 0.81
SKA3-205ENST00000465471 STYXQ8WUJ0 223 aa20.13■□□□□ 0.81
SKA3-205ENST00000465471 TRIM44Q96DX7 344 aaPredicted RBP20.13■□□□□ 0.81
SKA3-205ENST00000465471 CNDP2Q96KP4 475 aaKnown RBP20.13■□□□□ 0.81
SKA3-205ENST00000465471 RUNDC3BQ96NL0 473 aa20.13■□□□□ 0.81
SKA3-205ENST00000465471 RMI1Q9H9A7 625 aa20.13■□□□□ 0.81
SKA3-205ENST00000465471 TRIM39Q9HCM9 518 aa20.13■□□□□ 0.81
SKA3-205ENST00000465471 PCYT1BQ9Y5K3 369 aaPredicted RBP20.13■□□□□ 0.81
SKA3-205ENST00000465471 ST14Q9Y5Y6 855 aa20.13■□□□□ 0.81
SKA3-205ENST00000465471 U3KQA8 63 aa20.13■□□□□ 0.81
SKA3-205ENST00000465471 SPTBN2O15020 2390 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms