RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 DUSP4Q13115 394 aa18.22■□□□□ 0.51
SYNE4-204ENST00000465425 GPR17Q13304 367 aa18.22■□□□□ 0.51
SYNE4-204ENST00000465425 APOFQ13790 326 aa18.22■□□□□ 0.51
SYNE4-204ENST00000465425 TAF1AQ15573 450 aaPredicted RBP18.22■□□□□ 0.51
SYNE4-204ENST00000465425 RNF180Q86T96 592 aa18.22■□□□□ 0.51
SYNE4-204ENST00000465425 ZUFSPQ96AP4 578 aa18.22■□□□□ 0.51
SYNE4-204ENST00000465425 MPP4Q96JB8 637 aa18.22■□□□□ 0.51
SYNE4-204ENST00000465425 TCF12Q99081 682 aa18.22■□□□□ 0.51
SYNE4-204ENST00000465425 GPR21Q99679 349 aa18.22■□□□□ 0.51
SYNE4-204ENST00000465425 SLC29A1Q99808 456 aa18.22■□□□□ 0.51
SYNE4-204ENST00000465425 HAUS8Q9BT25 410 aa18.22■□□□□ 0.51
SYNE4-204ENST00000465425 GMPR2Q9P2T1 348 aaKnown RBP18.22■□□□□ 0.51
SYNE4-204ENST00000465425 EGFL7Q9UHF1 273 aa18.22■□□□□ 0.51
SYNE4-204ENST00000465425 DMTF1Q9Y222 760 aa18.22■□□□□ 0.51
SYNE4-204ENST00000465425 SPO11Q9Y5K1 396 aa18.22■□□□□ 0.51
SYNE4-204ENST00000465425 ZFP37Q9Y6Q3 630 aaPredicted RBP18.22■□□□□ 0.51
SYNE4-204ENST00000465425 BTN3A1O00481 513 aa18.22■□□□□ 0.51
SYNE4-204ENST00000465425 VILLO15195 856 aa18.22■□□□□ 0.51
SYNE4-204ENST00000465425 PFDN6O15212 129 aa18.22■□□□□ 0.51
SYNE4-204ENST00000465425 INSIG1O15503 277 aa18.22■□□□□ 0.51
SYNE4-204ENST00000465425 ACSL4O60488 711 aa18.22■□□□□ 0.51
SYNE4-204ENST00000465425 PSMA4P25789 261 aaKnown RBP18.22■□□□□ 0.51
SYNE4-204ENST00000465425 SLC11A2P49281 568 aa18.22■□□□□ 0.51
SYNE4-204ENST00000465425 CAPRIN1Q14444 709 aaKnown RBP18.22■□□□□ 0.51
SYNE4-204ENST00000465425 MBTPS1Q14703 1052 aa18.22■□□□□ 0.51
SYNE4-204ENST00000465425 TBCELQ5QJ74 424 aa18.22■□□□□ 0.51
SYNE4-204ENST00000465425 KLHDC10Q6PID8 442 aa18.22■□□□□ 0.51
SYNE4-204ENST00000465425 ERMP1Q7Z2K6 904 aa18.22■□□□□ 0.51
SYNE4-204ENST00000465425 SLC15A3Q8IY34 581 aa18.22■□□□□ 0.51
SYNE4-204ENST00000465425 NKAPQ8N5F7 415 aaKnown RBP18.22■□□□□ 0.51
SYNE4-204ENST00000465425 SCUBE2Q9NQ36 999 aa18.22■□□□□ 0.51
SYNE4-204ENST00000465425 VPS9D1Q9Y2B5 631 aa18.22■□□□□ 0.51
SYNE4-204ENST00000465425 ARIH1Q9Y4X5 557 aaPredicted RBP18.22■□□□□ 0.51
SYNE4-204ENST00000465425 TIMM22Q9Y584 194 aa18.22■□□□□ 0.51
SYNE4-204ENST00000465425 DHRS12A0PJE2 317 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 ARHGAP10A1A4S6 786 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 AQP12BA6NM10 295 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 SLC10A3P09131 477 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 CKMT2P17540 419 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 IL10P22301 178 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 SLC6A4P31645 630 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 CREB5Q02930 508 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 PTPRNQ16849 979 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 MYLK3Q32MK0 819 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 B3GNT6Q6ZMB0 384 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 SPPL2CQ8IUH8 684 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 AQP12AQ8IXF9 295 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 ANKFN1Q8N957 763 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 TSPAN14Q8NG11 270 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 LRRC58Q96CX6 371 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 CCM2LQ9NUG4 571 aaPredicted RBP18.21■□□□□ 0.51
SYNE4-204ENST00000465425 COMMD8Q9NX08 183 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 DNMT3LQ9UJW3 386 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 A0A1B0GTL3 188 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 NPEPPSL1A6NEC2 478 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 CDC7O00311 574 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 HNRNPRO43390 633 aaKnown RBP18.21■□□□□ 0.51
SYNE4-204ENST00000465425 CA12O43570 354 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 VPS26AO75436 327 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 BMP2P12643 396 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 HSD17B1P14061 328 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 ATP5C1P36542 298 aaKnown RBP18.21■□□□□ 0.51
SYNE4-204ENST00000465425 RGRP47804 291 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 ACLYP53396 1101 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 CDH4P55283 916 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 KCNK10P57789 538 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 NAA20P61599 178 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 ECT2LQ008S8 904 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 COQ5Q5HYK3 327 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 EFL1Q7Z2Z2 1120 aaKnown RBP18.21■□□□□ 0.51
SYNE4-204ENST00000465425 CARM1Q86X55 608 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 TRIML2Q8N7C3 387 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 MDGA1Q8NFP4 955 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 ZFP28Q8NHY6 868 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 FUBP1Q96AE4 644 aaKnown RBP18.21■□□□□ 0.51
SYNE4-204ENST00000465425 CDK5RAP1Q96SZ6 601 aaKnown RBP18.21■□□□□ 0.51
SYNE4-204ENST00000465425 TMEM161AQ9NX61 479 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 MED16Q9Y2X0 877 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 RNF11Q9Y3C5 154 aa18.21■□□□□ 0.51
SYNE4-204ENST00000465425 HTRA2O43464 458 aaPredicted RBP18.2■□□□□ 0.5
SYNE4-204ENST00000465425 MLYCDO95822 493 aa18.2■□□□□ 0.5
SYNE4-204ENST00000465425 CYBBP04839 570 aa18.2■□□□□ 0.5
SYNE4-204ENST00000465425 ALDH2P05091 517 aa18.2■□□□□ 0.5
SYNE4-204ENST00000465425 RPS17P08708 135 aaKnown RBP18.2■□□□□ 0.5
SYNE4-204ENST00000465425 ZDHHC11BP0C7U3 371 aa18.2■□□□□ 0.5
SYNE4-204ENST00000465425 ELNP15502 786 aa18.2■□□□□ 0.5
SYNE4-204ENST00000465425 SLC6A2P23975 617 aa18.2■□□□□ 0.5
SYNE4-204ENST00000465425 DIO3P55073 304 aa18.2■□□□□ 0.5
SYNE4-204ENST00000465425 SMARCB1Q12824 385 aa18.2■□□□□ 0.5
SYNE4-204ENST00000465425 SETMARQ53H47 684 aaPredicted RBP18.2■□□□□ 0.5
SYNE4-204ENST00000465425 BLOC1S3Q6QNY0 202 aa18.2■□□□□ 0.5
SYNE4-204ENST00000465425 SPATA19Q7Z5L4 167 aa18.2■□□□□ 0.5
SYNE4-204ENST00000465425 LPCAT1Q8NF37 534 aa18.2■□□□□ 0.5
SYNE4-204ENST00000465425 GLT1D1Q96MS3 346 aa18.2■□□□□ 0.5
SYNE4-204ENST00000465425 CCT7Q99832 543 aa18.2■□□□□ 0.5
SYNE4-204ENST00000465425 CAAP1Q9H8G2 361 aa18.2■□□□□ 0.5
SYNE4-204ENST00000465425 PNPLA3Q9NST1 481 aa18.2■□□□□ 0.5
SYNE4-204ENST00000465425 THEGQ9P2T0 379 aa18.2■□□□□ 0.5
SYNE4-204ENST00000465425 FNDC3AQ9Y2H6 1198 aaKnown RBP18.2■□□□□ 0.5
SYNE4-204ENST00000465425 SNX2O60749 519 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms