RNA–Protein interactions for RNA: ENST00000465352.1

ABCA4-203, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 1,048 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-203ENST00000465352 CDK18Q07002 472 aa14.2□□□□□ -0.14
ABCA4-203ENST00000465352 TRA2AQ13595 282 aaKnown RBP eCLIP14.2□□□□□ -0.14
ABCA4-203ENST00000465352 SLC14A2Q15849 920 aa14.2□□□□□ -0.14
ABCA4-203ENST00000465352 HENMT1Q5T8I9 393 aaKnown RBP14.2□□□□□ -0.14
ABCA4-203ENST00000465352 NPNTQ6UXI9 565 aa14.2□□□□□ -0.14
ABCA4-203ENST00000465352 USP53Q70EK8 1073 aa14.2□□□□□ -0.14
ABCA4-203ENST00000465352 PTCD2Q8WV60 388 aaKnown RBP14.2□□□□□ -0.14
ABCA4-203ENST00000465352 IMP4Q96G21 291 aaKnown RBP14.2□□□□□ -0.14
ABCA4-203ENST00000465352 WBP1Q96G27 269 aa14.2□□□□□ -0.14
ABCA4-203ENST00000465352 CCNL2Q96S94 520 aaPredicted RBP14.2□□□□□ -0.14
ABCA4-203ENST00000465352 B3GNT4Q9C0J1 378 aa14.2□□□□□ -0.14
ABCA4-203ENST00000465352 ZMYND15Q9H091 742 aa14.2□□□□□ -0.14
ABCA4-203ENST00000465352 RDH14Q9HBH5 336 aa14.2□□□□□ -0.14
ABCA4-203ENST00000465352 MAGEE1Q9HCI5 957 aa14.2□□□□□ -0.14
ABCA4-203ENST00000465352 KCNK4Q9NYG8 393 aa14.2□□□□□ -0.14
ABCA4-203ENST00000465352 SSUH2Q9Y2M2 353 aa14.2□□□□□ -0.14
ABCA4-203ENST00000465352 K7ENP7 123 aa14.19□□□□□ -0.14
ABCA4-203ENST00000465352 MTSS1O43312 755 aa14.19□□□□□ -0.14
ABCA4-203ENST00000465352 PSTPIP1O43586 416 aa14.19□□□□□ -0.14
ABCA4-203ENST00000465352 HGFP14210 728 aa14.19□□□□□ -0.14
ABCA4-203ENST00000465352 COMTP21964 271 aa14.19□□□□□ -0.14
ABCA4-203ENST00000465352 CD82P27701 267 aa14.19□□□□□ -0.14
ABCA4-203ENST00000465352 MAPK10P53779 464 aa14.19□□□□□ -0.14
ABCA4-203ENST00000465352 HADHBP55084 474 aaKnown RBP14.19□□□□□ -0.14
ABCA4-203ENST00000465352 GPLD1P80108 840 aa14.19□□□□□ -0.14
ABCA4-203ENST00000465352 TBX2Q13207 712 aaPredicted RBP14.19□□□□□ -0.14
ABCA4-203ENST00000465352 CLN3Q13286 438 aa14.19□□□□□ -0.14
ABCA4-203ENST00000465352 GALNT3Q14435 633 aa14.19□□□□□ -0.14
ABCA4-203ENST00000465352 TEX44Q53QW1 395 aa14.19□□□□□ -0.14
ABCA4-203ENST00000465352 ZNF569Q5MCW4 686 aa14.19□□□□□ -0.14
ABCA4-203ENST00000465352 INO80CQ6PI98 192 aaPredicted RBP14.19□□□□□ -0.14
ABCA4-203ENST00000465352 MFSD7Q6UXD7 560 aa14.19□□□□□ -0.14
ABCA4-203ENST00000465352 CHST15Q7LFX5 561 aaPredicted RBP14.19□□□□□ -0.14
ABCA4-203ENST00000465352 LYSMD3Q7Z3D4 306 aa14.19□□□□□ -0.14
ABCA4-203ENST00000465352 KDELC2Q7Z4H8 507 aa14.19□□□□□ -0.14
ABCA4-203ENST00000465352 AVL9Q8NBF6 648 aa14.19□□□□□ -0.14
ABCA4-203ENST00000465352 CCDC112Q8NEF3 446 aa14.19□□□□□ -0.14
ABCA4-203ENST00000465352 SNRNP27Q8WVK2 155 aaKnown RBP14.19□□□□□ -0.14
ABCA4-203ENST00000465352 PATE1Q8WXA2 126 aa14.19□□□□□ -0.14
ABCA4-203ENST00000465352 SH3KBP1Q96B97 665 aa14.19□□□□□ -0.14
ABCA4-203ENST00000465352 AHCYL2Q96HN2 611 aaKnown RBP14.19□□□□□ -0.14
ABCA4-203ENST00000465352 OLFM3Q96PB7 478 aa14.19□□□□□ -0.14
ABCA4-203ENST00000465352 ZSCAN5AQ9BUG6 496 aa14.19□□□□□ -0.14
ABCA4-203ENST00000465352 SPATA16Q9BXB7 569 aa14.19□□□□□ -0.14
ABCA4-203ENST00000465352 CEP41Q9BYV8 373 aa14.19□□□□□ -0.14
ABCA4-203ENST00000465352 GPR63Q9BZJ6 419 aa14.19□□□□□ -0.14
ABCA4-203ENST00000465352 CARD9Q9H257 536 aa14.19□□□□□ -0.14
ABCA4-203ENST00000465352 SEMA6CQ9H3T2 930 aa14.19□□□□□ -0.14
ABCA4-203ENST00000465352 GLOD4Q9HC38 313 aa14.19□□□□□ -0.14
ABCA4-203ENST00000465352 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.19□□□□□ -0.14
ABCA4-203ENST00000465352 PLEKHM1Q9Y4G2 1056 aa14.19□□□□□ -0.14
ABCA4-203ENST00000465352 PCDHB11Q9Y5F2 797 aa14.19□□□□□ -0.14
ABCA4-203ENST00000465352 SCN8AQ9UQD0 1980 aa14.18□□□□□ -0.14
ABCA4-203ENST00000465352 IGHV1OR21-1A0A087WYE8 117 aa14.18□□□□□ -0.14
ABCA4-203ENST00000465352 A0A0A6YYK5 440 aaPredicted RBP14.18□□□□□ -0.14
ABCA4-203ENST00000465352 OR5K4A6NMS3 321 aa14.18□□□□□ -0.14
ABCA4-203ENST00000465352 PPM1DO15297 605 aa14.18□□□□□ -0.14
ABCA4-203ENST00000465352 SLC25A14O95258 325 aaPredicted RBP14.18□□□□□ -0.14
ABCA4-203ENST00000465352 NDST3O95803 873 aa14.18□□□□□ -0.14
ABCA4-203ENST00000465352 ATP1A1P05023 1023 aaKnown RBP14.18□□□□□ -0.14
ABCA4-203ENST00000465352 LIPCP11150 499 aa14.18□□□□□ -0.14
ABCA4-203ENST00000465352 ITIH1P19827 911 aa14.18□□□□□ -0.14
ABCA4-203ENST00000465352 CD1CP29017 333 aa14.18□□□□□ -0.14
ABCA4-203ENST00000465352 CSTF2P33240 577 aaKnown RBP eCLIP14.18□□□□□ -0.14
ABCA4-203ENST00000465352 CYLC1P35663 651 aaPredicted RBP14.18□□□□□ -0.14
ABCA4-203ENST00000465352 FASLGP48023 281 aa14.18□□□□□ -0.14
ABCA4-203ENST00000465352 LIMK2P53671 638 aa14.18□□□□□ -0.14
ABCA4-203ENST00000465352 DCDC1P59894 354 aa14.18□□□□□ -0.14
ABCA4-203ENST00000465352 SQSTM1Q13501 440 aa14.18□□□□□ -0.14
ABCA4-203ENST00000465352 SPA17Q15506 151 aa14.18□□□□□ -0.14
ABCA4-203ENST00000465352 PCSK7Q16549 785 aa14.18□□□□□ -0.14
ABCA4-203ENST00000465352 PDPK2PQ6A1A2 396 aa14.18□□□□□ -0.14
ABCA4-203ENST00000465352 SARM1Q6SZW1 724 aa14.18□□□□□ -0.14
ABCA4-203ENST00000465352 CCDC170Q8IYT3 715 aa14.18□□□□□ -0.14
ABCA4-203ENST00000465352 SFRP1Q8N474 314 aa14.18□□□□□ -0.14
ABCA4-203ENST00000465352 OR4D9Q8NGE8 314 aa14.18□□□□□ -0.14
ABCA4-203ENST00000465352 OR10G6Q8NH81 332 aa14.18□□□□□ -0.14
ABCA4-203ENST00000465352 TFB1MQ8WVM0 346 aaKnown RBP14.18□□□□□ -0.14
ABCA4-203ENST00000465352 TRIB3Q96RU7 358 aa14.18□□□□□ -0.14
ABCA4-203ENST00000465352 WDR24Q96S15 920 aa14.18□□□□□ -0.14
ABCA4-203ENST00000465352 SLC38A3Q99624 504 aa14.18□□□□□ -0.14
ABCA4-203ENST00000465352 HERPUD2Q9BSE4 406 aa14.18□□□□□ -0.14
ABCA4-203ENST00000465352 CNOT6Q9ULM6 557 aaKnown RBP14.18□□□□□ -0.14
ABCA4-203ENST00000465352 SHOC2Q9UQ13 582 aa14.18□□□□□ -0.14
ABCA4-203ENST00000465352 HYOU1Q9Y4L1 999 aa14.18□□□□□ -0.14
ABCA4-203ENST00000465352 ST14Q9Y5Y6 855 aa14.18□□□□□ -0.14
ABCA4-203ENST00000465352 ALG6Q9Y672 507 aa14.18□□□□□ -0.14
ABCA4-203ENST00000465352 OAS3Q9Y6K5 1087 aaKnown RBP14.18□□□□□ -0.14
ABCA4-203ENST00000465352 LOC400499M0QZD8 3231 aa14.18□□□□□ -0.14
ABCA4-203ENST00000465352 KALRNO60229 2985 aa14.18□□□□□ -0.14
ABCA4-203ENST00000465352 PIEZO2Q9H5I5 2752 aa14.17□□□□□ -0.14
ABCA4-203ENST00000465352 HELZ2Q9BYK8 2649 aaKnown RBP14.17□□□□□ -0.14
ABCA4-203ENST00000465352 TRBV23OR9-2A0A075B6M9 112 aa14.17□□□□□ -0.14
ABCA4-203ENST00000465352 FADS2P1A8MWK0 482 aa14.17□□□□□ -0.14
ABCA4-203ENST00000465352 GPR89AB7ZAQ6 455 aa14.17□□□□□ -0.14
ABCA4-203ENST00000465352 AGRPO00253 132 aa14.17□□□□□ -0.14
ABCA4-203ENST00000465352 GRID2O43424 1007 aa14.17□□□□□ -0.14
ABCA4-203ENST00000465352 DUX1O43812 170 aa14.17□□□□□ -0.14
ABCA4-203ENST00000465352 CST8O60676 142 aa14.17□□□□□ -0.14
ABCA4-203ENST00000465352 DNAJC6O75061 913 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms