RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 AIG1Q9NVV5 245 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 POLG2Q9UHN1 485 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 NEU3Q9UQ49 428 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 SNX10Q9Y5X0 201 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 DICER1Q9UPY3 1922 aaKnown RBP7.26□□□□□ -1.25
USP48-206ENST00000464577 ASPDHA6ND91 283 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 DFFAO00273 331 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 SLC7A4O43246 635 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 MGEA5O60502 916 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 CNMDO75829 334 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 ENO2P09104 434 aaPredicted RBP7.26□□□□□ -1.25
USP48-206ENST00000464577 GSTT2P0CG29 244 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 GSTT2BP0CG30 244 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 NCAM1P13591 858 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 HGFP14210 728 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 CD1DP15813 335 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 NCK1P16333 377 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 FDXRP22570 491 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 HOXC13P31276 330 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 CHRNA4P43681 627 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 ZFP36L2P47974 494 aaKnown RBP7.26□□□□□ -1.25
USP48-206ENST00000464577 MAPK10P53779 464 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 EMX2Q04743 252 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 SPCS2Q15005 226 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 PCBP1Q15365 356 aaKnown RBP eCLIP7.26□□□□□ -1.25
USP48-206ENST00000464577 EML3Q32P44 896 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 XKR4Q5GH76 650 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 RABL3Q5HYI8 236 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 GPR158Q5T848 1215 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 DEPDC1Q5TB30 811 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 TIGD7Q6NT04 549 aaPredicted RBP7.26□□□□□ -1.25
USP48-206ENST00000464577 NOTUMQ6P988 496 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 CRTC3Q6UUV7 619 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 KDELC1Q6UW63 502 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 TMEM207Q6UWW9 146 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 R3HCC1LQ7Z5L2 792 aaKnown RBP7.26□□□□□ -1.25
USP48-206ENST00000464577 CILP2Q8IUL8 1156 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 TMEM199Q8N511 208 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 PTGR2Q8N8N7 351 aaPredicted RBP7.26□□□□□ -1.25
USP48-206ENST00000464577 PJA1Q8NG27 643 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 STARD8Q92502 1023 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 PTERQ96BW5 349 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 TUBGCP3Q96CW5 907 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 ZNF419Q96HQ0 510 aaPredicted RBP7.26□□□□□ -1.25
USP48-206ENST00000464577 MRGPRX2Q96LB1 330 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 NSMCE2Q96MF7 247 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 MED10Q9BTT4 135 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 FUNDC2Q9BWH2 189 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 NUSAP1Q9BXS6 441 aaKnown RBP7.26□□□□□ -1.25
USP48-206ENST00000464577 BRINP2Q9C0B6 783 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 TKTL2Q9H0I9 626 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 MFSD1Q9H3U5 465 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 TUBB1Q9H4B7 451 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 QTRT2Q9H974 415 aaKnown RBP7.26□□□□□ -1.25
USP48-206ENST00000464577 POPDC3Q9HBV1 291 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 ATP13A1Q9HD20 1204 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 POLR3BQ9NW08 1133 aaPredicted RBP7.26□□□□□ -1.25
USP48-206ENST00000464577 USE1Q9NZ43 259 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 GPRC5DQ9NZD1 345 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 DSEQ9UL01 958 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 PCDHB3Q9Y5E6 796 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 SHROOM3Q8TF72 1996 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 SMIM28A0A1B0GU29 152 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 GABRDO14764 452 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 FGF10O15520 208 aaPredicted RBP7.26□□□□□ -1.25
USP48-206ENST00000464577 B4GAT1O43505 415 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 KDM1AO60341 852 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 MAFKO60675 156 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 UGT2B11O75310 529 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 KATNA1O75449 491 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 RSL1D1O76021 490 aaKnown RBP7.26□□□□□ -1.25
USP48-206ENST00000464577 GABARAPO95166 117 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 KCNH1O95259 989 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 HLA-DQB2P05538 268 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 PGK2P07205 417 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 HTR1AP08908 422 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 RAP2AP10114 183 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 TSPAN8P19075 237 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 TGM1P22735 817 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 KCNC1P48547 511 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 GMPSP49915 693 aaPredicted RBP7.26□□□□□ -1.25
USP48-206ENST00000464577 SUOXP51687 545 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 HNRNPFP52597 415 aaKnown RBP7.26□□□□□ -1.25
USP48-206ENST00000464577 CDKN2DP55273 166 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 MAP3K7CLP57077 242 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 YBX1P67809 324 aaKnown RBP7.26□□□□□ -1.25
USP48-206ENST00000464577 PYCR3Q53H96 274 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 C6orf141Q5SZD1 244 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 KIAA0319Q5VV43 1072 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 ARHGAP36Q6ZRI8 547 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 BHLHA9Q7RTU4 235 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 CATSPER4Q7RTX7 472 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 CYP2U1Q7Z449 544 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 ITIH5Q86UX2 942 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 IFNEQ86WN2 208 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 KIAA2013Q8IYS2 634 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 MFSD4AQ8N468 514 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 DPP10Q8N608 796 aa7.26□□□□□ -1.25
USP48-206ENST00000464577 SMG8Q8ND04 991 aaKnown RBP7.26□□□□□ -1.25
USP48-206ENST00000464577 CHDHQ8NE62 594 aaPredicted RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms