RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 LSMEM1Q8N8F7 131 aa4.13□□□□□ -1.75
CLK1-208ENST00000464454 NEXN-AS1Q8NBZ9 246 aa4.13□□□□□ -1.75
CLK1-208ENST00000464454 OR8K5Q8NH50 307 aa4.13□□□□□ -1.75
CLK1-208ENST00000464454 WASF1Q92558 559 aa4.13□□□□□ -1.75
CLK1-208ENST00000464454 FAM84BQ96KN1 310 aaPredicted RBP4.13□□□□□ -1.75
CLK1-208ENST00000464454 OR1F2PQ96R84 312 aa4.13□□□□□ -1.75
CLK1-208ENST00000464454 KXD1Q9BQD3 176 aa4.13□□□□□ -1.75
CLK1-208ENST00000464454 SRSF8Q9BRL6 282 aaKnown RBP4.13□□□□□ -1.75
CLK1-208ENST00000464454 KCNN2Q9H2S1 579 aa4.13□□□□□ -1.75
CLK1-208ENST00000464454 PPP1R3EQ9H7J1 279 aa4.13□□□□□ -1.75
CLK1-208ENST00000464454 COPG2Q9UBF2 871 aa4.13□□□□□ -1.75
CLK1-208ENST00000464454 UBA2Q9UBT2 640 aaPredicted RBP4.13□□□□□ -1.75
CLK1-208ENST00000464454 CMAHPQ9Y471 501 aa4.13□□□□□ -1.75
CLK1-208ENST00000464454 NFS1Q9Y697 457 aa4.13□□□□□ -1.75
CLK1-208ENST00000464454 ARHGEF40Q8TER5 1519 aa4.12□□□□□ -1.75
CLK1-208ENST00000464454 IGLV5-37A0A075B6J1 123 aa4.12□□□□□ -1.75
CLK1-208ENST00000464454 CTDSP2O14595 271 aa4.12□□□□□ -1.75
CLK1-208ENST00000464454 OGG1O15527 345 aa4.12□□□□□ -1.75
CLK1-208ENST00000464454 PGM3O95394 542 aa4.12□□□□□ -1.75
CLK1-208ENST00000464454 IGHV4-30-4P0DP06 118 aa4.12□□□□□ -1.75
CLK1-208ENST00000464454 NR2F1P10589 423 aa4.12□□□□□ -1.75
CLK1-208ENST00000464454 SELLP14151 372 aa4.12□□□□□ -1.75
CLK1-208ENST00000464454 PLA2G2AP14555 144 aa4.12□□□□□ -1.75
CLK1-208ENST00000464454 UBA1P22314 1058 aaKnown RBP4.12□□□□□ -1.75
CLK1-208ENST00000464454 ITGB8P26012 769 aa4.12□□□□□ -1.75
CLK1-208ENST00000464454 KRT20P35900 424 aa4.12□□□□□ -1.75
CLK1-208ENST00000464454 SLC15A1P46059 708 aa4.12□□□□□ -1.75
CLK1-208ENST00000464454 MRPS5P82675 430 aaKnown RBP4.12□□□□□ -1.75
CLK1-208ENST00000464454 BNC1Q01954 994 aa4.12□□□□□ -1.75
CLK1-208ENST00000464454 TRAF3Q13114 568 aa4.12□□□□□ -1.75
CLK1-208ENST00000464454 BECN1Q14457 450 aa4.12□□□□□ -1.75
CLK1-208ENST00000464454 NFATC4Q14934 902 aa4.12□□□□□ -1.75
CLK1-208ENST00000464454 CALCRLQ16602 461 aa4.12□□□□□ -1.75
CLK1-208ENST00000464454 NTRK2Q16620 822 aa4.12□□□□□ -1.75
CLK1-208ENST00000464454 PNLIPRP3Q17RR3 467 aa4.12□□□□□ -1.75
CLK1-208ENST00000464454 IZUMO4Q1ZYL8 232 aa4.12□□□□□ -1.75
CLK1-208ENST00000464454 EIF2S3LQ2VIR3 472 aaKnown RBP4.12□□□□□ -1.75
CLK1-208ENST00000464454 XKR9Q5GH70 373 aa4.12□□□□□ -1.75
CLK1-208ENST00000464454 FAM122CQ6P4D5 195 aa4.12□□□□□ -1.75
CLK1-208ENST00000464454 RBM23Q86U06 439 aaKnown RBP4.12□□□□□ -1.75
CLK1-208ENST00000464454 TSPAN33Q86UF1 283 aa4.12□□□□□ -1.75
CLK1-208ENST00000464454 SERINC2Q96SA4 455 aa4.12□□□□□ -1.75
CLK1-208ENST00000464454 HAUS8Q9BT25 410 aa4.12□□□□□ -1.75
CLK1-208ENST00000464454 SLCO5A1Q9H2Y9 848 aa4.12□□□□□ -1.75
CLK1-208ENST00000464454 PDE7BQ9NP56 450 aa4.12□□□□□ -1.75
CLK1-208ENST00000464454 CNGB3Q9NQW8 809 aa4.12□□□□□ -1.75
CLK1-208ENST00000464454 ACSS1Q9NUB1 689 aaPredicted RBP4.12□□□□□ -1.75
CLK1-208ENST00000464454 GIMAP4Q9NUV9 329 aa4.12□□□□□ -1.75
CLK1-208ENST00000464454 OCIAD1Q9NX40 245 aa4.12□□□□□ -1.75
CLK1-208ENST00000464454 MTMR10Q9NXD2 777 aa4.12□□□□□ -1.75
CLK1-208ENST00000464454 MRPL15Q9P015 296 aaKnown RBP4.12□□□□□ -1.75
CLK1-208ENST00000464454 OR14J1Q9UGF5 321 aa4.12□□□□□ -1.75
CLK1-208ENST00000464454 SEC63Q9UGP8 760 aaKnown RBP4.12□□□□□ -1.75
CLK1-208ENST00000464454 CHORDC1Q9UHD1 332 aaPredicted RBP4.12□□□□□ -1.75
CLK1-208ENST00000464454 FBXW11Q9UKB1 542 aa4.12□□□□□ -1.75
CLK1-208ENST00000464454 EXO1Q9UQ84 846 aaKnown RBP4.12□□□□□ -1.75
CLK1-208ENST00000464454 TRIP12Q14669 1992 aaPredicted RBP4.11□□□□□ -1.75
CLK1-208ENST00000464454 KANSL1LA0AUZ9 987 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 DENND3A2RUS2 1198 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 CPED1A4D0V7 1026 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 OR2A25A4D2G3 310 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 LRRC72A6NJI9 287 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 ATP2A1O14983 1001 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 PLOD3O60568 738 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 MITFO75030 526 aaPredicted RBP4.11□□□□□ -1.75
CLK1-208ENST00000464454 ENTPD3O75355 529 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 ERAL1O75616 437 aaKnown RBP4.11□□□□□ -1.75
CLK1-208ENST00000464454 ZNF12P17014 697 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 ANXA7P20073 488 aaKnown RBP4.11□□□□□ -1.75
CLK1-208ENST00000464454 RRM1P23921 792 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 ACADLP28330 430 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 NRIP1P48552 1158 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 RRP1P56182 461 aaKnown RBP4.11□□□□□ -1.75
CLK1-208ENST00000464454 CSNK2A1P68400 391 aaPredicted RBP4.11□□□□□ -1.75
CLK1-208ENST00000464454 CALD1Q05682 793 aaKnown RBP4.11□□□□□ -1.75
CLK1-208ENST00000464454 SLC39A14Q15043 492 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 EFNB3Q15768 340 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 KIF19Q2TAC6 998 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 AMZ1Q400G9 498 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 FAM69BQ5VUD6 431 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 GPR139Q6DWJ6 353 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 KCTD18Q6PI47 426 aaPredicted RBP4.11□□□□□ -1.75
CLK1-208ENST00000464454 CLEC17AQ6ZS10 378 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 BHLHA9Q7RTU4 235 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 PRPF39Q86UA1 669 aaKnown RBP4.11□□□□□ -1.75
CLK1-208ENST00000464454 EPHX4Q8IUS5 362 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 CSNK2A3Q8NEV1 391 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 LRRC59Q96AG4 307 aaKnown RBP4.11□□□□□ -1.75
CLK1-208ENST00000464454 DUX5Q96PT3 197 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 NUDCD1Q96RS6 583 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 GAD1Q99259 594 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 SLF1Q9BQI6 1058 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 CENPOQ9BU64 300 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 HRH4Q9H3N8 390 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 OSGEPL1Q9H4B0 414 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 MAGIXQ9H6Y5 334 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 C17orf75Q9HAS0 396 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 MMP25Q9NPA2 562 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 ARHGEF38Q9NXL2 777 aa4.11□□□□□ -1.75
CLK1-208ENST00000464454 MORF4L1Q9UBU8 362 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms