RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 RPL3P39023 403 aaKnown RBP15.74■□□□□ 0.11
SMC4-204ENST00000462787 FAM92BQ6ZTR7 304 aa15.74■□□□□ 0.11
SMC4-204ENST00000462787 PEX5LQ8IYB4 626 aa15.74■□□□□ 0.11
SMC4-204ENST00000462787 TRPV1Q8NER1 839 aa15.74■□□□□ 0.11
SMC4-204ENST00000462787 SHISA4Q96DD7 197 aa15.74■□□□□ 0.11
SMC4-204ENST00000462787 OSMRQ99650 979 aa15.74■□□□□ 0.11
SMC4-204ENST00000462787 OSBPL10Q9BXB5 764 aa15.74■□□□□ 0.11
SMC4-204ENST00000462787 MED28Q9H204 178 aa15.74■□□□□ 0.11
SMC4-204ENST00000462787 ATP13A1Q9HD20 1204 aa15.74■□□□□ 0.11
SMC4-204ENST00000462787 VPS4AQ9UN37 437 aa15.74■□□□□ 0.11
SMC4-204ENST00000462787 SH3BP1Q9Y3L3 701 aa15.74■□□□□ 0.11
SMC4-204ENST00000462787 TCAF1Q9Y4C2 921 aa15.74■□□□□ 0.11
SMC4-204ENST00000462787 MON2Q7Z3U7 1717 aa15.74■□□□□ 0.11
SMC4-204ENST00000462787 H3BRB1 525 aa15.74■□□□□ 0.11
SMC4-204ENST00000462787 CCRL2O00421 344 aa15.74■□□□□ 0.11
SMC4-204ENST00000462787 CASKO14936 926 aa15.74■□□□□ 0.11
SMC4-204ENST00000462787 PIP5K1BO14986 540 aa15.74■□□□□ 0.11
SMC4-204ENST00000462787 UBA1P22314 1058 aaKnown RBP15.74■□□□□ 0.11
SMC4-204ENST00000462787 GNPDA1P46926 289 aa15.74■□□□□ 0.11
SMC4-204ENST00000462787 GTF2A2P52657 109 aa15.74■□□□□ 0.11
SMC4-204ENST00000462787 IRF8Q02556 426 aa15.74■□□□□ 0.11
SMC4-204ENST00000462787 KLF1Q13351 362 aaPredicted RBP15.74■□□□□ 0.11
SMC4-204ENST00000462787 PMF1Q6P1K2 205 aa15.74■□□□□ 0.11
SMC4-204ENST00000462787 ZUFSPQ96AP4 578 aa15.74■□□□□ 0.11
SMC4-204ENST00000462787 CDK5RAP1Q96SZ6 601 aaKnown RBP15.74■□□□□ 0.11
SMC4-204ENST00000462787 MLPHQ9BV36 600 aaPredicted RBP15.74■□□□□ 0.11
SMC4-204ENST00000462787 RNF38Q9H0F5 515 aa15.74■□□□□ 0.11
SMC4-204ENST00000462787 TUT1Q9H6E5 874 aaKnown RBP15.74■□□□□ 0.11
SMC4-204ENST00000462787 SPATA31A6Q5VVP1 1343 aa15.74■□□□□ 0.11
SMC4-204ENST00000462787 GUCY1B2O75343 617 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 NPM3O75607 178 aaKnown RBP15.73■□□□□ 0.11
SMC4-204ENST00000462787 DNAJB5O75953 348 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 GRK4P32298 578 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 GPR158Q5T848 1215 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 SH3BP5LQ7L8J4 393 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 COLGALT2Q8IYK4 626 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 COPS4Q9BT78 406 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 SLC22A4Q9H015 551 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 IRF2BPLQ9H1B7 796 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 ZNF358Q9NW07 568 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 TRPM5Q9NZQ8 1165 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 CFL2Q9Y281 166 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 ZBTB14O43829 449 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 PSMA3P25788 255 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 PCLAFQ15004 111 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 AZIN2Q96A70 460 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 LINGO1Q96FE5 620 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 TEFMQ96QE5 360 aaKnown RBP15.73■□□□□ 0.11
SMC4-204ENST00000462787 DCSTAMPQ9H295 470 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 ZDHHC7Q9NXF8 308 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 XRN1Q8IZH2 1706 aaKnown RBP15.73■□□□□ 0.11
SMC4-204ENST00000462787 TFPTP0C1Z6 253 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 TCF4P15884 667 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 ZNF182P17025 639 aaPredicted RBP15.73■□□□□ 0.11
SMC4-204ENST00000462787 TYMPP19971 482 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 NPTX1Q15818 432 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 GRIK4Q16099 956 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 DENND6AQ8IWF6 608 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 LRRC15Q8TF66 581 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 TPK1Q9H3S4 243 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 CCDC177Q9NQR7 707 aaPredicted RBP15.73■□□□□ 0.11
SMC4-204ENST00000462787 TIMM13Q9Y5L4 95 aaPredicted RBP15.73■□□□□ 0.11
SMC4-204ENST00000462787 BUD23O43709 281 aaKnown RBP15.73■□□□□ 0.11
SMC4-204ENST00000462787 CYP11A1P05108 521 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 STT3AP46977 705 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 ST8SIA6P61647 398 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 ANXA8L1Q5VT79 327 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 TATDN1Q6P1N9 297 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 MPP5Q8N3R9 675 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 NETO2Q8NC67 525 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 MROH8Q9H579 483 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 SPATA31A5Q5VU36 1347 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 SPATA31A7Q8IWB4 1347 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 IFT172Q9UG01 1749 aa15.73■□□□□ 0.11
SMC4-204ENST00000462787 GPR182O15218 404 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 NKRFO15226 690 aaKnown RBP eCLIP15.72■□□□□ 0.11
SMC4-204ENST00000462787 RAB39AQ14964 217 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 GPRC5AQ8NFJ5 357 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 LRRC58Q96CX6 371 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 C1GALT1C1Q96EU7 318 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 MED8Q96G25 268 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 NTPCRQ9BSD7 190 aaKnown RBP15.72■□□□□ 0.11
SMC4-204ENST00000462787 PRDM8Q9NQV8 689 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 BAIAP2Q9UQB8 552 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 FAM234BA2RU67 622 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 SPATA31C2B4DYI2 1134 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 BTBD19C9JJ37 291 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 K7EPI3 171 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 CXCR6O00574 342 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 PROZP22891 400 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 MYL9P24844 172 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 AZGP1P25311 298 aaKnown RBP15.72■□□□□ 0.11
SMC4-204ENST00000462787 NMBRP28336 390 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 CPT1AP50416 773 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 IL18Q14116 193 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 STON2Q8WXE9 905 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 SLC4A9Q96Q91 983 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 DUSP16Q9BY84 665 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 MKLN1Q9UL63 735 aa15.72■□□□□ 0.11
SMC4-204ENST00000462787 MRPS7Q9Y2R9 242 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms