RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 RMI1Q9H9A7 625 aa15.27■□□□□ 0.04
SKA3-204ENST00000462482 SARS2Q9NP81 518 aaKnown RBP15.27■□□□□ 0.04
SKA3-204ENST00000462482 GEMIN8Q9NWZ8 242 aaKnown RBP15.27■□□□□ 0.04
SKA3-204ENST00000462482 CTTNBP2NLQ9P2B4 639 aa15.27■□□□□ 0.04
SKA3-204ENST00000462482 ST14Q9Y5Y6 855 aa15.27■□□□□ 0.04
SKA3-204ENST00000462482 B3GALT1Q9Y5Z6 326 aa15.27■□□□□ 0.04
SKA3-204ENST00000462482 RGSL1A5PLK6 1076 aa15.26■□□□□ 0.03
SKA3-204ENST00000462482 OR5K4A6NMS3 321 aa15.26■□□□□ 0.03
SKA3-204ENST00000462482 ZNF891A8MT65 544 aaPredicted RBP15.26■□□□□ 0.03
SKA3-204ENST00000462482 A8MU76 341 aa15.26■□□□□ 0.03
SKA3-204ENST00000462482 SNX2O60749 519 aa15.26■□□□□ 0.03
SKA3-204ENST00000462482 KRT7P08729 469 aa15.26■□□□□ 0.03
SKA3-204ENST00000462482 CD48P09326 243 aa15.26■□□□□ 0.03
SKA3-204ENST00000462482 IL4RP24394 825 aa15.26■□□□□ 0.03
SKA3-204ENST00000462482 CSF2RBP32927 897 aa15.26■□□□□ 0.03
SKA3-204ENST00000462482 MAPK9P45984 424 aa15.26■□□□□ 0.03
SKA3-204ENST00000462482 NFATC2Q13469 925 aa15.26■□□□□ 0.03
SKA3-204ENST00000462482 DPYSL3Q14195 570 aa15.26■□□□□ 0.03
SKA3-204ENST00000462482 HGSNATQ68CP4 663 aa15.26■□□□□ 0.03
SKA3-204ENST00000462482 NCBP2-AS2Q69YL0 99 aa15.26■□□□□ 0.03
SKA3-204ENST00000462482 ALG1LQ6GMV1 187 aa15.26■□□□□ 0.03
SKA3-204ENST00000462482 CAVIN1Q6NZI2 390 aaKnown RBP15.26■□□□□ 0.03
SKA3-204ENST00000462482 WDR74Q6RFH5 385 aaPredicted RBP15.26■□□□□ 0.03
SKA3-204ENST00000462482 CEACAM20Q6UY09 585 aa15.26■□□□□ 0.03
SKA3-204ENST00000462482 LYSMD3Q7Z3D4 306 aa15.26■□□□□ 0.03
SKA3-204ENST00000462482 ZNF761Q86XN6 746 aaPredicted RBP15.26■□□□□ 0.03
SKA3-204ENST00000462482 PHYKPLQ8IUZ5 450 aa15.26■□□□□ 0.03
SKA3-204ENST00000462482 FAM71BQ8TC56 605 aa15.26■□□□□ 0.03
SKA3-204ENST00000462482 HTR3CQ8WXA8 447 aa15.26■□□□□ 0.03
SKA3-204ENST00000462482 COL26A1Q96A83 441 aa15.26■□□□□ 0.03
SKA3-204ENST00000462482 AGAP2Q99490 1192 aa15.26■□□□□ 0.03
SKA3-204ENST00000462482 MLPHQ9BV36 600 aaPredicted RBP15.26■□□□□ 0.03
SKA3-204ENST00000462482 TRIM4Q9C037 500 aa15.26■□□□□ 0.03
SKA3-204ENST00000462482 EPB41L1Q9H4G0 881 aa15.26■□□□□ 0.03
SKA3-204ENST00000462482 OCIAD1Q9NX40 245 aa15.26■□□□□ 0.03
SKA3-204ENST00000462482 LUC7L2Q9Y383 392 aaKnown RBP15.26■□□□□ 0.03
SKA3-204ENST00000462482 SETXQ7Z333 2677 aaKnown RBP15.26■□□□□ 0.03
SKA3-204ENST00000462482 KIR2DS5A0A0G2JLQ3 304 aa15.25■□□□□ 0.03
SKA3-204ENST00000462482 A0A0G2JNG1 304 aa15.25■□□□□ 0.03
SKA3-204ENST00000462482 KIR2DS3K7RE56 304 aa15.25■□□□□ 0.03
SKA3-204ENST00000462482 ARHGAP6O43182 974 aa15.25■□□□□ 0.03
SKA3-204ENST00000462482 SUV39H1O43463 412 aa15.25■□□□□ 0.03
SKA3-204ENST00000462482 ATP1A1P05023 1023 aaKnown RBP15.25■□□□□ 0.03
SKA3-204ENST00000462482 ACP5P13686 325 aa15.25■□□□□ 0.03
SKA3-204ENST00000462482 LIFP15018 202 aa15.25■□□□□ 0.03
SKA3-204ENST00000462482 WT1P19544 449 aaPredicted RBP15.25■□□□□ 0.03
SKA3-204ENST00000462482 MAP4P27816 1152 aaKnown RBP15.25■□□□□ 0.03
SKA3-204ENST00000462482 CCR10P46092 362 aa15.25■□□□□ 0.03
SKA3-204ENST00000462482 UBASH3AP57075 661 aa15.25■□□□□ 0.03
SKA3-204ENST00000462482 NFKB2Q00653 900 aa15.25■□□□□ 0.03
SKA3-204ENST00000462482 KIR2DS5Q14953 304 aa15.25■□□□□ 0.03
SKA3-204ENST00000462482 ANKS6Q68DC2 871 aa15.25■□□□□ 0.03
SKA3-204ENST00000462482 KDELC2Q7Z4H8 507 aa15.25■□□□□ 0.03
SKA3-204ENST00000462482 CCDC13Q8IYE1 715 aa15.25■□□□□ 0.03
SKA3-204ENST00000462482 NLGN4XQ8N0W4 816 aa15.25■□□□□ 0.03
SKA3-204ENST00000462482 NLGN4YQ8NFZ3 816 aaPredicted RBP15.25■□□□□ 0.03
SKA3-204ENST00000462482 SMIM14Q96QK8 99 aa15.25■□□□□ 0.03
SKA3-204ENST00000462482 LYSMD1Q96S90 227 aa15.25■□□□□ 0.03
SKA3-204ENST00000462482 ANP32EQ9BTT0 268 aa15.25■□□□□ 0.03
SKA3-204ENST00000462482 FUCA2Q9BTY2 467 aa15.25■□□□□ 0.03
SKA3-204ENST00000462482 SLC12A9Q9BXP2 914 aa15.25■□□□□ 0.03
SKA3-204ENST00000462482 TRIT1Q9H3H1 467 aaKnown RBP15.25■□□□□ 0.03
SKA3-204ENST00000462482 GPN2Q9H9Y4 310 aaPredicted RBP15.25■□□□□ 0.03
SKA3-204ENST00000462482 RAD18Q9NS91 495 aa15.25■□□□□ 0.03
SKA3-204ENST00000462482 TMEM9Q9P0T7 183 aa15.25■□□□□ 0.03
SKA3-204ENST00000462482 PDP2Q9P2J9 529 aa15.25■□□□□ 0.03
SKA3-204ENST00000462482 KCNK6Q9Y257 313 aa15.25■□□□□ 0.03
SKA3-204ENST00000462482 PRKAB1Q9Y478 270 aa15.25■□□□□ 0.03
SKA3-204ENST00000462482 ASH1LQ9NR48 2969 aaKnown RBP15.24■□□□□ 0.03
SKA3-204ENST00000462482 A0A087X0T9 212 aa15.24■□□□□ 0.03
SKA3-204ENST00000462482 GOLGA6L19H0YKK7 550 aa15.24■□□□□ 0.03
SKA3-204ENST00000462482 DNAJC6O75061 913 aa15.24■□□□□ 0.03
SKA3-204ENST00000462482 PROSCO94903 275 aa15.24■□□□□ 0.03
SKA3-204ENST00000462482 HLA-DQB2P05538 268 aa15.24■□□□□ 0.03
SKA3-204ENST00000462482 FAM228BP0C875 321 aa15.24■□□□□ 0.03
SKA3-204ENST00000462482 ITGB6P18564 788 aa15.24■□□□□ 0.03
SKA3-204ENST00000462482 CD86P42081 329 aa15.24■□□□□ 0.03
SKA3-204ENST00000462482 SPINT3P49223 89 aa15.24■□□□□ 0.03
SKA3-204ENST00000462482 EPHA4P54764 986 aa15.24■□□□□ 0.03
SKA3-204ENST00000462482 FANCCQ00597 558 aa15.24■□□□□ 0.03
SKA3-204ENST00000462482 MC2RQ01718 297 aa15.24■□□□□ 0.03
SKA3-204ENST00000462482 MC1RQ01726 317 aa15.24■□□□□ 0.03
SKA3-204ENST00000462482 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.24■□□□□ 0.03
SKA3-204ENST00000462482 IYDQ6PHW0 289 aa15.24■□□□□ 0.03
SKA3-204ENST00000462482 PLXDC1Q8IUK5 500 aa15.24■□□□□ 0.03
SKA3-204ENST00000462482 ARRDC2Q8TBH0 407 aa15.24■□□□□ 0.03
SKA3-204ENST00000462482 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.24■□□□□ 0.03
SKA3-204ENST00000462482 CTNNBL1Q8WYA6 563 aaPredicted RBP15.24■□□□□ 0.03
SKA3-204ENST00000462482 PMEPA1Q969W9 287 aa15.24■□□□□ 0.03
SKA3-204ENST00000462482 CARD9Q9H257 536 aa15.24■□□□□ 0.03
SKA3-204ENST00000462482 UVRAGQ9P2Y5 699 aa15.24■□□□□ 0.03
SKA3-204ENST00000462482 TBC1D29Q9UFV1 150 aa15.24■□□□□ 0.03
SKA3-204ENST00000462482 CAPN11Q9UMQ6 739 aa15.24■□□□□ 0.03
SKA3-204ENST00000462482 COL6A6A6NMZ7 2263 aa15.24■□□□□ 0.03
SKA3-204ENST00000462482 ANKRD66B4E2M5 251 aa15.23■□□□□ 0.03
SKA3-204ENST00000462482 POLR1CO15160 346 aaPredicted RBP15.23■□□□□ 0.03
SKA3-204ENST00000462482 GRID2O43424 1007 aa15.23■□□□□ 0.03
SKA3-204ENST00000462482 MTA2O94776 668 aa15.23■□□□□ 0.03
SKA3-204ENST00000462482 PRLP01236 227 aa15.23■□□□□ 0.03
SKA3-204ENST00000462482 JCHAINP01591 159 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms