RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 DPYSL5Q9BPU6 564 aa15.97■□□□□ 0.15
COL7A1-204ENST00000462475 ZNF670Q9BS34 389 aa15.97■□□□□ 0.15
COL7A1-204ENST00000462475 PCDH9Q9HC56 1237 aa15.97■□□□□ 0.15
COL7A1-204ENST00000462475 SLC39A1Q9NY26 324 aa15.97■□□□□ 0.15
COL7A1-204ENST00000462475 TBC1D29Q9UFV1 150 aa15.97■□□□□ 0.15
COL7A1-204ENST00000462475 ZNHIT2Q9UHR6 403 aa15.97■□□□□ 0.15
COL7A1-204ENST00000462475 DNPEPQ9ULA0 475 aa15.97■□□□□ 0.15
COL7A1-204ENST00000462475 KCNK6Q9Y257 313 aa15.97■□□□□ 0.15
COL7A1-204ENST00000462475 C1orf232A0A0U1RR37 186 aa15.96■□□□□ 0.15
COL7A1-204ENST00000462475 CYSRT1A8MQ03 144 aa15.96■□□□□ 0.15
COL7A1-204ENST00000462475 A8MU76 341 aa15.96■□□□□ 0.15
COL7A1-204ENST00000462475 FADS2P1A8MWK0 482 aa15.96■□□□□ 0.15
COL7A1-204ENST00000462475 B4E171 279 aa15.96■□□□□ 0.15
COL7A1-204ENST00000462475 TERTO14746 1132 aaKnown RBP15.96■□□□□ 0.15
COL7A1-204ENST00000462475 DUX1O43812 170 aa15.96■□□□□ 0.15
COL7A1-204ENST00000462475 RAD1O60671 282 aa15.96■□□□□ 0.15
COL7A1-204ENST00000462475 CCNCP24863 283 aa15.96■□□□□ 0.15
COL7A1-204ENST00000462475 TSPAN7P41732 249 aa15.96■□□□□ 0.15
COL7A1-204ENST00000462475 TAS2R40P59535 323 aa15.96■□□□□ 0.15
COL7A1-204ENST00000462475 FANCCQ00597 558 aa15.96■□□□□ 0.15
COL7A1-204ENST00000462475 HHEXQ03014 270 aa15.96■□□□□ 0.15
COL7A1-204ENST00000462475 NFATC2Q13469 925 aa15.96■□□□□ 0.15
COL7A1-204ENST00000462475 NFKBIBQ15653 356 aa15.96■□□□□ 0.15
COL7A1-204ENST00000462475 IFI16Q16666 785 aaKnown RBP15.96■□□□□ 0.15
COL7A1-204ENST00000462475 SNAP47Q5SQN1 464 aa15.96■□□□□ 0.15
COL7A1-204ENST00000462475 ALKBH5Q6P6C2 394 aaKnown RBP15.96■□□□□ 0.15
COL7A1-204ENST00000462475 CHST15Q7LFX5 561 aaPredicted RBP15.96■□□□□ 0.15
COL7A1-204ENST00000462475 CACNA2D3Q8IZS8 1091 aa15.96■□□□□ 0.15
COL7A1-204ENST00000462475 IL22RA1Q8N6P7 574 aa15.96■□□□□ 0.15
COL7A1-204ENST00000462475 PQLC3Q8N755 202 aa15.96■□□□□ 0.15
COL7A1-204ENST00000462475 OR10G6Q8NH81 332 aa15.96■□□□□ 0.15
COL7A1-204ENST00000462475 CPLX3Q8WVH0 158 aa15.96■□□□□ 0.15
COL7A1-204ENST00000462475 FATE1Q969F0 183 aa15.96■□□□□ 0.15
COL7A1-204ENST00000462475 TSGA13Q96PP4 275 aa15.96■□□□□ 0.15
COL7A1-204ENST00000462475 LYSMD1Q96S90 227 aa15.96■□□□□ 0.15
COL7A1-204ENST00000462475 VPS18Q9P253 973 aa15.96■□□□□ 0.15
COL7A1-204ENST00000462475 PDP2Q9P2J9 529 aa15.96■□□□□ 0.15
COL7A1-204ENST00000462475 AMACRQ9UHK6 382 aa15.96■□□□□ 0.15
COL7A1-204ENST00000462475 MAST4O15021 2626 aa15.95■□□□□ 0.14
COL7A1-204ENST00000462475 A6NCN8 305 aa15.95■□□□□ 0.14
COL7A1-204ENST00000462475 MMP2P08253 660 aa15.95■□□□□ 0.14
COL7A1-204ENST00000462475 SFTPCP11686 197 aa15.95■□□□□ 0.14
COL7A1-204ENST00000462475 ACP5P13686 325 aa15.95■□□□□ 0.14
COL7A1-204ENST00000462475 CA4P22748 312 aa15.95■□□□□ 0.14
COL7A1-204ENST00000462475 CES1P23141 567 aa15.95■□□□□ 0.14
COL7A1-204ENST00000462475 SPINT3P49223 89 aa15.95■□□□□ 0.14
COL7A1-204ENST00000462475 CSRP3P50461 194 aa15.95■□□□□ 0.14
COL7A1-204ENST00000462475 RPL26P61254 145 aaKnown RBP15.95■□□□□ 0.14
COL7A1-204ENST00000462475 ZBED6P86452 979 aa15.95■□□□□ 0.14
COL7A1-204ENST00000462475 SLC10A2Q12908 348 aaPredicted RBP15.95■□□□□ 0.14
COL7A1-204ENST00000462475 QPCTQ16769 361 aa15.95■□□□□ 0.14
COL7A1-204ENST00000462475 FAM182AQ5T1J6 154 aa15.95■□□□□ 0.14
COL7A1-204ENST00000462475 DCAF12Q5T6F0 453 aa15.95■□□□□ 0.14
COL7A1-204ENST00000462475 HENMT1Q5T8I9 393 aaKnown RBP15.95■□□□□ 0.14
COL7A1-204ENST00000462475 ATG14Q6ZNE5 492 aa15.95■□□□□ 0.14
COL7A1-204ENST00000462475 KCTD6Q8NC69 237 aa15.95■□□□□ 0.14
COL7A1-204ENST00000462475 COL26A1Q96A83 441 aa15.95■□□□□ 0.14
COL7A1-204ENST00000462475 FAF2Q96CS3 445 aa15.95■□□□□ 0.14
COL7A1-204ENST00000462475 CTRCQ99895 268 aa15.95■□□□□ 0.14
COL7A1-204ENST00000462475 ASPSCR1Q9BZE9 553 aa15.95■□□□□ 0.14
COL7A1-204ENST00000462475 SARS2Q9NP81 518 aaKnown RBP15.95■□□□□ 0.14
COL7A1-204ENST00000462475 GEMIN8Q9NWZ8 242 aaKnown RBP15.95■□□□□ 0.14
COL7A1-204ENST00000462475 IL17BQ9UHF5 180 aa15.95■□□□□ 0.14
COL7A1-204ENST00000462475 NENFQ9UMX5 172 aa15.95■□□□□ 0.14
COL7A1-204ENST00000462475 RPL26L1Q9UNX3 145 aaKnown RBP15.95■□□□□ 0.14
COL7A1-204ENST00000462475 SUV39H1O43463 412 aa15.94■□□□□ 0.14
COL7A1-204ENST00000462475 PPFIA2O75334 1257 aa15.94■□□□□ 0.14
COL7A1-204ENST00000462475 PROSCO94903 275 aa15.94■□□□□ 0.14
COL7A1-204ENST00000462475 CD86P42081 329 aa15.94■□□□□ 0.14
COL7A1-204ENST00000462475 MAPK9P45984 424 aa15.94■□□□□ 0.14
COL7A1-204ENST00000462475 RAB15P59190 212 aa15.94■□□□□ 0.14
COL7A1-204ENST00000462475 PDK2Q15119 407 aa15.94■□□□□ 0.14
COL7A1-204ENST00000462475 BORAQ6PGQ7 559 aa15.94■□□□□ 0.14
COL7A1-204ENST00000462475 IYDQ6PHW0 289 aa15.94■□□□□ 0.14
COL7A1-204ENST00000462475 WDR74Q6RFH5 385 aaPredicted RBP15.94■□□□□ 0.14
COL7A1-204ENST00000462475 ARHGAP22Q7Z5H3 698 aa15.94■□□□□ 0.14
COL7A1-204ENST00000462475 LUZP1Q86V48 1076 aa15.94■□□□□ 0.14
COL7A1-204ENST00000462475 RAVER1Q8IY67 606 aaKnown RBP15.94■□□□□ 0.14
COL7A1-204ENST00000462475 HDAC11Q96DB2 347 aa15.94■□□□□ 0.14
COL7A1-204ENST00000462475 RTP4Q96DX8 246 aa15.94■□□□□ 0.14
COL7A1-204ENST00000462475 SLC25A18Q9H1K4 315 aa15.94■□□□□ 0.14
COL7A1-204ENST00000462475 FAM83DQ9H4H8 585 aa15.94■□□□□ 0.14
COL7A1-204ENST00000462475 CBX8Q9HC52 389 aa15.94■□□□□ 0.14
COL7A1-204ENST00000462475 DTLQ9NZJ0 730 aa15.94■□□□□ 0.14
COL7A1-204ENST00000462475 CTTNBP2NLQ9P2B4 639 aa15.94■□□□□ 0.14
COL7A1-204ENST00000462475 PILRAQ9UKJ1 303 aa15.94■□□□□ 0.14
COL7A1-204ENST00000462475 CAPN11Q9UMQ6 739 aa15.94■□□□□ 0.14
COL7A1-204ENST00000462475 SPENQ96T58 3664 aaKnown RBP15.93■□□□□ 0.14
COL7A1-204ENST00000462475 KCNK1O00180 336 aa15.93■□□□□ 0.14
COL7A1-204ENST00000462475 SNX2O60749 519 aa15.93■□□□□ 0.14
COL7A1-204ENST00000462475 JCHAINP01591 159 aa15.93■□□□□ 0.14
COL7A1-204ENST00000462475 GYPCP04921 128 aa15.93■□□□□ 0.14
COL7A1-204ENST00000462475 MX2P20592 715 aa15.93■□□□□ 0.14
COL7A1-204ENST00000462475 ZBTB17Q13105 803 aa15.93■□□□□ 0.14
COL7A1-204ENST00000462475 LYSMD3Q7Z3D4 306 aa15.93■□□□□ 0.14
COL7A1-204ENST00000462475 CCDC13Q8IYE1 715 aa15.93■□□□□ 0.14
COL7A1-204ENST00000462475 CNTD1Q8N815 330 aa15.93■□□□□ 0.14
COL7A1-204ENST00000462475 CCNYQ8ND76 341 aa15.93■□□□□ 0.14
COL7A1-204ENST00000462475 NCSTNQ92542 709 aa15.93■□□□□ 0.14
COL7A1-204ENST00000462475 EID2BQ96D98 161 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms