RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 FOXD2O60548 495 aaPredicted RBP5.78□□□□□ -1.48
VPS36-202ENST00000462289 CST8O60676 142 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 ZNF189O75820 626 aaPredicted RBP5.78□□□□□ -1.48
VPS36-202ENST00000462289 FTCDO95954 541 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 RETP07949 1114 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 KRT10P13645 584 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 PRLRP16471 622 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 GM2AP17900 193 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 CD6P30203 668 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 SLC8A1P32418 973 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 ACSL1P33121 698 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 NUDT1P36639 197 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 PLA2G5P39877 138 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 PXNP49023 591 aaPredicted RBP5.78□□□□□ -1.48
VPS36-202ENST00000462289 RENBPP51606 427 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 SNRPD1P62314 119 aaKnown RBP5.78□□□□□ -1.48
VPS36-202ENST00000462289 ZBTB17Q13105 803 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 SRSF5Q13243 272 aaKnown RBP5.78□□□□□ -1.48
VPS36-202ENST00000462289 MSLNQ13421 630 aaPredicted RBP5.78□□□□□ -1.48
VPS36-202ENST00000462289 KRT81Q14533 505 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 PDK1Q15118 436 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 OASLQ15646 514 aaKnown RBP5.78□□□□□ -1.48
VPS36-202ENST00000462289 CDKN3Q16667 212 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 USP39Q53GS9 565 aaKnown RBP5.78□□□□□ -1.48
VPS36-202ENST00000462289 ANKRD39Q53RE8 183 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 HS1BP3Q53T59 392 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 SLC45A4Q5BKX6 768 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 ZNF805Q5CZA5 627 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 FAM46CQ5VWP2 391 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 LAIR1Q6GTX8 287 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 AADACL2Q6P093 401 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 BRAT1Q6PJG6 821 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 PARS2Q7L3T8 475 aaKnown RBP5.78□□□□□ -1.48
VPS36-202ENST00000462289 DSG4Q86SJ6 1040 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 MMAAQ8IVH4 418 aaKnown RBP5.78□□□□□ -1.48
VPS36-202ENST00000462289 ATPAF2Q8N5M1 289 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 TMEM145Q8NBT3 493 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 NETO2Q8NC67 525 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 PIP4K2CQ8TBX8 421 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 PRCCQ92733 491 aaPredicted RBP5.78□□□□□ -1.48
VPS36-202ENST00000462289 RAB7BQ96AH8 199 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 IMP4Q96G21 291 aaKnown RBP5.78□□□□□ -1.48
VPS36-202ENST00000462289 DHRS1Q96LJ7 313 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 TEKT5Q96M29 485 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 CCDC114Q96M63 670 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 VAT1Q99536 393 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 LGMNQ99538 433 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 C19orf43Q9BQ61 176 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 GORASP1Q9BQQ3 440 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 SPON2Q9BUD6 331 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 CDADC1Q9BWV3 514 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 FRMD8P1Q9BZ68 369 aaPredicted RBP5.78□□□□□ -1.48
VPS36-202ENST00000462289 NEUROG2Q9H2A3 272 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 EBF2Q9HAK2 575 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 CAPN10Q9HC96 672 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 PREBQ9HCU5 417 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 IL36AQ9UHA7 158 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 EVLQ9UI08 416 aaPredicted RBP5.78□□□□□ -1.48
VPS36-202ENST00000462289 PILRBQ9UKJ0 227 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 PYCARDQ9ULZ3 195 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 GUCA1BQ9UMX6 200 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 ZKSCAN5Q9Y2L8 839 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.78□□□□□ -1.48
VPS36-202ENST00000462289 JRKLQ9Y4A0 524 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 R4GN57 208 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 SPTBN2O15020 2390 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.77□□□□□ -1.49
VPS36-202ENST00000462289 A0A1W2PQ67 120 aa5.77□□□□□ -1.49
VPS36-202ENST00000462289 A0A1W2PR77 199 aa5.77□□□□□ -1.49
VPS36-202ENST00000462289 TCRBV7S2A1N4TA0A589 114 aa5.77□□□□□ -1.49
VPS36-202ENST00000462289 GOLGA6L9A6NEM1 432 aa5.77□□□□□ -1.49
VPS36-202ENST00000462289 C16orf96A6NNT2 1141 aa5.77□□□□□ -1.49
VPS36-202ENST00000462289 C1QTNF3-AMACRE9PGA6 284 aa5.77□□□□□ -1.49
VPS36-202ENST00000462289 DFFAO00273 331 aa5.77□□□□□ -1.49
VPS36-202ENST00000462289 PPP1R12AO14974 1030 aaPredicted RBP5.77□□□□□ -1.49
VPS36-202ENST00000462289 INSIG1O15503 277 aa5.77□□□□□ -1.49
VPS36-202ENST00000462289 DAPK3O43293 454 aa5.77□□□□□ -1.49
VPS36-202ENST00000462289 ZSCAN12O43309 604 aa5.77□□□□□ -1.49
VPS36-202ENST00000462289 RNASEH1O60930 286 aaKnown RBP5.77□□□□□ -1.49
VPS36-202ENST00000462289 GJB3O75712 270 aa5.77□□□□□ -1.49
VPS36-202ENST00000462289 TJP3O95049 919 aa5.77□□□□□ -1.49
VPS36-202ENST00000462289 IGSF6O95976 241 aa5.77□□□□□ -1.49
VPS36-202ENST00000462289 EPOP01588 193 aa5.77□□□□□ -1.49
VPS36-202ENST00000462289 LMNAP02545 664 aaKnown RBP5.77□□□□□ -1.49
VPS36-202ENST00000462289 HLA-DQB2P05538 268 aa5.77□□□□□ -1.49
VPS36-202ENST00000462289 IMPDH2P12268 514 aa5.77□□□□□ -1.49
VPS36-202ENST00000462289 ADRB3P13945 408 aa5.77□□□□□ -1.49
VPS36-202ENST00000462289 CCNB1P14635 433 aa5.77□□□□□ -1.49
VPS36-202ENST00000462289 PSMA3P25788 255 aa5.77□□□□□ -1.49
VPS36-202ENST00000462289 PTPN3P26045 913 aa5.77□□□□□ -1.49
VPS36-202ENST00000462289 MMP12P39900 470 aa5.77□□□□□ -1.49
VPS36-202ENST00000462289 DPP6P42658 865 aa5.77□□□□□ -1.49
VPS36-202ENST00000462289 PTGER3P43115 390 aa5.77□□□□□ -1.49
VPS36-202ENST00000462289 MMP13P45452 471 aa5.77□□□□□ -1.49
VPS36-202ENST00000462289 RPL26P61254 145 aaKnown RBP5.77□□□□□ -1.49
VPS36-202ENST00000462289 RHOAP61586 193 aa5.77□□□□□ -1.49
VPS36-202ENST00000462289 NIPAL4Q0D2K0 466 aa5.77□□□□□ -1.49
VPS36-202ENST00000462289 CNTN1Q12860 1018 aa5.77□□□□□ -1.49
VPS36-202ENST00000462289 RALGDSQ12967 914 aa5.77□□□□□ -1.49
VPS36-202ENST00000462289 FGL2Q14314 439 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms