RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 MFSD7Q6UXD7 560 aa9.09□□□□□ -0.95
BRCA1-207ENST00000461798 ZNF574Q6ZN55 896 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-207ENST00000461798 BZW1Q7L1Q6 419 aaKnown RBP9.09□□□□□ -0.95
BRCA1-207ENST00000461798 TMPRSS9Q7Z410 1059 aa9.09□□□□□ -0.95
BRCA1-207ENST00000461798 TMC3Q7Z5M5 1100 aa9.09□□□□□ -0.95
BRCA1-207ENST00000461798 NT5DC3Q86UY8 548 aa9.09□□□□□ -0.95
BRCA1-207ENST00000461798 PIM3Q86V86 326 aa9.09□□□□□ -0.95
BRCA1-207ENST00000461798 GALNT13Q8IUC8 556 aa9.09□□□□□ -0.95
BRCA1-207ENST00000461798 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.09□□□□□ -0.95
BRCA1-207ENST00000461798 CCHCR1Q8TD31 782 aa9.09□□□□□ -0.95
BRCA1-207ENST00000461798 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-207ENST00000461798 EID2BQ96D98 161 aa9.09□□□□□ -0.95
BRCA1-207ENST00000461798 NAF1Q96HR8 494 aaKnown RBP9.09□□□□□ -0.95
BRCA1-207ENST00000461798 SRPK1Q96SB4 655 aaKnown RBP9.09□□□□□ -0.95
BRCA1-207ENST00000461798 CMKLR1Q99788 373 aa9.09□□□□□ -0.95
BRCA1-207ENST00000461798 DPYSL5Q9BPU6 564 aa9.09□□□□□ -0.95
BRCA1-207ENST00000461798 MAGEE1Q9HCI5 957 aa9.09□□□□□ -0.95
BRCA1-207ENST00000461798 GOLGA6AQ9NYA3 693 aa9.09□□□□□ -0.95
BRCA1-207ENST00000461798 PKD2L2Q9NZM6 624 aa9.09□□□□□ -0.95
BRCA1-207ENST00000461798 PDP2Q9P2J9 529 aa9.09□□□□□ -0.95
BRCA1-207ENST00000461798 ATXN7L1Q9ULK2 861 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-207ENST00000461798 PLEKHM1Q9Y4G2 1056 aa9.09□□□□□ -0.95
BRCA1-207ENST00000461798 LOXL2Q9Y4K0 774 aa9.09□□□□□ -0.95
BRCA1-207ENST00000461798 TTLL3Q9Y4R7 772 aa9.09□□□□□ -0.95
BRCA1-207ENST00000461798 AHCTF1Q8WYP5 2266 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 UNC13CQ8NB66 2214 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 C1orf232A0A0U1RR37 186 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 EIF4E1BA6NMX2 242 aaKnown RBP9.08□□□□□ -0.96
BRCA1-207ENST00000461798 FADS2P1A8MWK0 482 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-207ENST00000461798 K7ENP7 123 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 ERVH48-1M5A8F1 160 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 HGSO14964 777 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-207ENST00000461798 EPOP01588 193 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 KRT1P04264 644 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 JMJD7P0C870 316 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 HGFP14210 728 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 ALDH4A1P30038 563 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 ACTR1BP42025 376 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 CDKN2BP42772 138 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 MAGEA1P43355 309 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 CLCNKAP51800 687 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 DCDC1P59894 354 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 ACTR1AP61163 376 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 CDK18Q07002 472 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 AP1B1Q10567 949 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 TFDP2Q14188 446 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 PRKD1Q15139 912 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-207ENST00000461798 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-207ENST00000461798 PDPK2PQ6A1A2 396 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 INO80CQ6PI98 192 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-207ENST00000461798 FOXR1Q6PIV2 292 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 DOK6Q6PKX4 331 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 NPNTQ6UXI9 565 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 USP53Q70EK8 1073 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 TRIM74Q86UV6 250 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 RFX6Q8HWS3 928 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 SFRP1Q8N474 314 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 TC2NQ8N9U0 490 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 RNF214Q8ND24 703 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 OR4D9Q8NGE8 314 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 DTX3LQ8TDB6 740 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 PATE1Q8WXA2 126 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 TEKT5Q96M29 485 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 ANP32EQ9BTT0 268 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 CARD9Q9H257 536 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 SEMA6CQ9H3T2 930 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 ZFYVE1Q9HBF4 777 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 GLOD4Q9HC38 313 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 CPNE5Q9HCH3 593 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 TRIM39Q9HCM9 518 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 RAD18Q9NS91 495 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 PCDHGA3Q9Y5H0 932 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 PCYT1BQ9Y5K3 369 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-207ENST00000461798 ALG6Q9Y672 507 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 OAS3Q9Y6K5 1087 aaKnown RBP9.08□□□□□ -0.96
BRCA1-207ENST00000461798 BAHCC1Q9P281 2608 aa9.08□□□□□ -0.96
BRCA1-207ENST00000461798 ARHGEF17Q96PE2 2063 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-207ENST00000461798 KIF26BQ2KJY2 2108 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 IGHV1OR21-1A0A087WYE8 117 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 A0A0A6YYK5 440 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-207ENST00000461798 IGHV5-10-1A0A0J9YXX1 117 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 LOC285095A0A1B0GVY8 99 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 A6NCN8 305 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 OR5K4A6NMS3 321 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 GPR89AB7ZAQ6 455 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 INPP4BO15327 924 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 EFSO43281 561 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 MTSS1O43312 755 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 PSTPIP1O43586 416 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 SPOPO43791 374 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 NUAK1O60285 661 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 ASMTLO95671 621 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 NDST3O95803 873 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 ATP1A1P05023 1023 aaKnown RBP9.07□□□□□ -0.96
BRCA1-207ENST00000461798 GPR89BP0CG08 455 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 PTPN3P26045 913 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 CD82P27701 267 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 LIMK2P53671 638 aa9.07□□□□□ -0.96
BRCA1-207ENST00000461798 GPLD1P80108 840 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms