RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 KRTAP5-11Q6L8G4 156 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 ANKRD54Q6NXT1 300 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 TPRG1Q6ZUI0 275 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 ZNF367Q7RTV3 350 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 CCDC186Q7Z3E2 898 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 LINC00346Q8IVM7 164 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 GUF1Q8N442 669 aaKnown RBP3.05□□□□□ -1.92
HDAC6-212ENST00000461608 MIGA1Q8NAN2 632 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 KCTD6Q8NC69 237 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 HJURPQ8NCD3 748 aaPredicted RBP3.05□□□□□ -1.92
HDAC6-212ENST00000461608 TSPAN14Q8NG11 270 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 OR8K5Q8NH50 307 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 WFIKKN2Q8TEU8 576 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 PTPMT1Q8WUK0 201 aaPredicted RBP3.05□□□□□ -1.92
HDAC6-212ENST00000461608 INPP5DQ92835 1189 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 TAAR8Q969N4 342 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 ARSGQ96EG1 525 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 RADILQ96JH8 1075 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 CFAP57Q96MR6 1250 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 DGAT2Q96PD7 388 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 GCNAQ96QF7 691 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 SRSF8Q9BRL6 282 aaKnown RBP3.05□□□□□ -1.92
HDAC6-212ENST00000461608 HAUS8Q9BT25 410 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 CENPOQ9BU64 300 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 SF3B5Q9BWJ5 86 aaKnown RBP3.05□□□□□ -1.92
HDAC6-212ENST00000461608 POLDIP3Q9BY77 421 aaKnown RBP3.05□□□□□ -1.92
HDAC6-212ENST00000461608 DCLK3Q9C098 648 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 MMP27Q9H306 513 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 DNAJB4Q9UDY4 337 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 AMACRQ9UHK6 382 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 DBNLQ9UJU6 430 aaKnown RBP3.05□□□□□ -1.92
HDAC6-212ENST00000461608 PADI1Q9ULC6 663 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 ZNF148Q9UQR1 794 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 WBP11Q9Y2W2 641 aaKnown RBP3.05□□□□□ -1.92
HDAC6-212ENST00000461608 PTRH2Q9Y3E5 179 aaKnown RBP3.05□□□□□ -1.92
HDAC6-212ENST00000461608 TRBC2A0A5B9 178 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 FAM170AA1A519 330 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 CPED1A4D0V7 1026 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 OR6C75A6NL08 312 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 EIF4E1BA6NMX2 242 aaKnown RBP3.04□□□□□ -1.92
HDAC6-212ENST00000461608 A8MXE2 369 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 B4DGG1 531 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 TIMM23O14925 209 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 IPO8O15397 1037 aaKnown RBP3.04□□□□□ -1.92
HDAC6-212ENST00000461608 SPINT2O43291 252 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 TBCAO75347 108 aaKnown RBP3.04□□□□□ -1.92
HDAC6-212ENST00000461608 MOSPD3O75425 235 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 AFPP02771 609 aaKnown RBP3.04□□□□□ -1.92
HDAC6-212ENST00000461608 LCATP04180 440 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 HSP90AB1P08238 724 aaKnown RBP3.04□□□□□ -1.92
HDAC6-212ENST00000461608 CYC1P08574 325 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 FGF2P09038 288 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 QDPRP09417 244 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 SELLP14151 372 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 MMP9P14780 707 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 GJA1P17302 382 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 TRIM21P19474 475 aaKnown RBP3.04□□□□□ -1.92
HDAC6-212ENST00000461608 CDC25AP30304 524 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 THPOP40225 353 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 CLCNKAP51800 687 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 GRSF1Q12849 480 aaKnown RBP eCLIP3.04□□□□□ -1.92
HDAC6-212ENST00000461608 GAGE2BQ13066 116 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 GRAPQ13588 217 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 SNTB1Q13884 538 aaKnown RBP3.04□□□□□ -1.92
HDAC6-212ENST00000461608 CTTNQ14247 550 aaKnown RBP3.04□□□□□ -1.92
HDAC6-212ENST00000461608 MYBPC2Q14324 1141 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 MVPQ14764 893 aaKnown RBP3.04□□□□□ -1.92
HDAC6-212ENST00000461608 CTF1Q16619 201 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 CRY2Q49AN0 593 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 GAGE2EQ4V326 116 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 ATP13A5Q4VNC0 1218 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 LCE1AQ5T7P2 110 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 ADALQ6DHV7 355 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 GAGE2AQ6NT46 116 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 PAPD4Q6PIY7 484 aaKnown RBP3.04□□□□□ -1.92
HDAC6-212ENST00000461608 COLCA1Q6ZS62 124 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 Q6ZSV7 163 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 CHST3Q7LGC8 479 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 SDCCAG8Q86SQ7 713 aaPredicted RBP3.04□□□□□ -1.92
HDAC6-212ENST00000461608 CCDC190Q86UF4 302 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 HAPLN4Q86UW8 402 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 NKAIN3Q8N8D7 197 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 PPP4R1Q8TF05 950 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 FAM216AQ8WUB2 273 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 LPGAT1Q92604 370 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 TMCO6Q96DC7 493 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 HMCESQ96FZ2 354 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 URB1-AS1Q96HZ7 61 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 TXNDC15Q96J42 360 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 PPP1R13BQ96KQ4 1090 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 SMC6Q96SB8 1091 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 PAFAH2Q99487 392 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 KXD1Q9BQD3 176 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 SPATC1LQ9H0A9 340 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 FAM234AQ9H0X4 552 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 OR10A4Q9H209 315 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 FOXP1Q9H334 677 aaPredicted RBP3.04□□□□□ -1.92
HDAC6-212ENST00000461608 PIGMQ9H3S5 423 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 MMP25Q9NPA2 562 aa3.04□□□□□ -1.92
HDAC6-212ENST00000461608 CCDC177Q9NQR7 707 aaPredicted RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms