RNA–Protein interactions for RNA: ENST00000460060.5

C4A-244, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-244ENST00000460060 ZNF140P52738 457 aaPredicted RBP12.71□□□□□ -0.37
C4A-244ENST00000460060 ACVR1Q04771 509 aa12.71□□□□□ -0.37
C4A-244ENST00000460060 ELP6Q0PNE2 266 aa12.71□□□□□ -0.37
C4A-244ENST00000460060 SFSWAPQ12872 951 aaKnown RBP12.71□□□□□ -0.37
C4A-244ENST00000460060 GRIK2Q13002 908 aa12.71□□□□□ -0.37
C4A-244ENST00000460060 ARHGEF7Q14155 803 aa12.71□□□□□ -0.37
C4A-244ENST00000460060 STAT4Q14765 748 aa12.71□□□□□ -0.37
C4A-244ENST00000460060 CNGA3Q16281 694 aa12.71□□□□□ -0.37
C4A-244ENST00000460060 COL28A1Q2UY09 1125 aa12.71□□□□□ -0.37
C4A-244ENST00000460060 LRRC73Q5JTD7 316 aa12.71□□□□□ -0.37
C4A-244ENST00000460060 KIAA0930Q6ICG6 404 aaPredicted RBP12.71□□□□□ -0.37
C4A-244ENST00000460060 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.71□□□□□ -0.37
C4A-244ENST00000460060 SIPA1Q96FS4 1042 aa12.71□□□□□ -0.37
C4A-244ENST00000460060 CYTH2Q99418 400 aa12.71□□□□□ -0.37
C4A-244ENST00000460060 C19orf43Q9BQ61 176 aa12.71□□□□□ -0.37
C4A-244ENST00000460060 C20orf96Q9NUD7 363 aaPredicted RBP12.71□□□□□ -0.37
C4A-244ENST00000460060 NLE1Q9NVX2 485 aaPredicted RBP12.71□□□□□ -0.37
C4A-244ENST00000460060 ZNF446Q9NWS9 450 aa12.71□□□□□ -0.37
C4A-244ENST00000460060 WSB2Q9NYS7 404 aaPredicted RBP12.71□□□□□ -0.37
C4A-244ENST00000460060 MOCS1Q9NZB8 636 aa12.71□□□□□ -0.37
C4A-244ENST00000460060 RABGEF1Q9UJ41 708 aa12.71□□□□□ -0.37
C4A-244ENST00000460060 APOBEC2Q9Y235 224 aaKnown RBP12.71□□□□□ -0.37
C4A-244ENST00000460060 PLAAQ9Y263 795 aa12.71□□□□□ -0.37
C4A-244ENST00000460060 NUMA1Q14980 2115 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 A0A0U1RQS6 177 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 PLK4O00444 970 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 AREL1O15033 823 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 RNASEH2AO75792 299 aaKnown RBP12.7□□□□□ -0.38
C4A-244ENST00000460060 LHCGRP22888 699 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 DRD3P35462 400 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 MMP12P39900 470 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 EIF3BP55884 814 aaKnown RBP12.7□□□□□ -0.38
C4A-244ENST00000460060 TMPRSS15P98073 1019 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 MGAT5Q09328 741 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 IFFO1Q0D2I5 559 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 PTPRCAPQ14761 206 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 LONRF1Q17RB8 773 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 KLHL38Q2WGJ6 581 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 TTC31Q49AM3 519 aaPredicted RBP12.7□□□□□ -0.38
C4A-244ENST00000460060 LRRC66Q68CR7 880 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 PDPK2PQ6A1A2 396 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 ZNF449Q6P9G9 518 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 TRMT10BQ6PF06 316 aaKnown RBP12.7□□□□□ -0.38
C4A-244ENST00000460060 KIAA1324Q6UXG2 1013 aaKnown RBP12.7□□□□□ -0.38
C4A-244ENST00000460060 TSPAN33Q86UF1 283 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 CACUL1Q86Y37 369 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 AADATQ8N5Z0 425 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 OR4K2Q8NGD2 314 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 OR13C4Q8NGS5 318 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 OR13J1Q8NGT2 312 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 GANCQ8TET4 914 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 EID2BQ96D98 161 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 CERS2Q96G23 380 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 CDKN2AIPNLQ96HQ2 116 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 DNAJC1Q96KC8 554 aaKnown RBP12.7□□□□□ -0.38
C4A-244ENST00000460060 TBATAQ96M53 351 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 ZIM3Q96PE6 472 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 OMDQ99983 421 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 ACSS3Q9H6R3 686 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 BPIFA1Q9NP55 256 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 PPANQ9NQ55 473 aaKnown RBP12.7□□□□□ -0.38
C4A-244ENST00000460060 ITM2CQ9NQX7 267 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 FBXL12Q9NXK8 326 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 IL17CQ9P0M4 197 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 USP36Q9P275 1121 aaKnown RBP12.7□□□□□ -0.38
C4A-244ENST00000460060 PCOLCE2Q9UKZ9 415 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 NCKAP1Q9Y2A7 1128 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 PKP3Q9Y446 797 aa12.7□□□□□ -0.38
C4A-244ENST00000460060 EXOC1LA0A1B0GW35 172 aa12.69□□□□□ -0.38
C4A-244ENST00000460060 A0A1W2PP55 124 aa12.69□□□□□ -0.38
C4A-244ENST00000460060 RGSL1A5PLK6 1076 aa12.69□□□□□ -0.38
C4A-244ENST00000460060 FAM159BA6NKW6 160 aa12.69□□□□□ -0.38
C4A-244ENST00000460060 NEMP1O14524 444 aa12.69□□□□□ -0.38
C4A-244ENST00000460060 SLC7A4O43246 635 aa12.69□□□□□ -0.38
C4A-244ENST00000460060 SPINT1O43278 529 aa12.69□□□□□ -0.38
C4A-244ENST00000460060 ATP8B1O43520 1251 aa12.69□□□□□ -0.38
C4A-244ENST00000460060 VAPBO95292 243 aa12.69□□□□□ -0.38
C4A-244ENST00000460060 SHBGP04278 402 aa12.69□□□□□ -0.38
C4A-244ENST00000460060 ZNF883P0CG24 379 aa12.69□□□□□ -0.38
C4A-244ENST00000460060 ERVK-10P10266 1014 aa12.69□□□□□ -0.38
C4A-244ENST00000460060 ACADMP11310 421 aa12.69□□□□□ -0.38
C4A-244ENST00000460060 ZNF30P17039 623 aa12.69□□□□□ -0.38
C4A-244ENST00000460060 HADHAP40939 763 aa12.69□□□□□ -0.38
C4A-244ENST00000460060 ARCN1P48444 511 aaKnown RBP12.69□□□□□ -0.38
C4A-244ENST00000460060 ARSDP51689 593 aa12.69□□□□□ -0.38
C4A-244ENST00000460060 STC1P52823 247 aa12.69□□□□□ -0.38
C4A-244ENST00000460060 PRAMEP78395 509 aa12.69□□□□□ -0.38
C4A-244ENST00000460060 PTSQ03393 145 aa12.69□□□□□ -0.38
C4A-244ENST00000460060 RALGDSQ12967 914 aa12.69□□□□□ -0.38
C4A-244ENST00000460060 THOC5Q13769 683 aaKnown RBP12.69□□□□□ -0.38
C4A-244ENST00000460060 TMEM52BQ4KMG9 183 aa12.69□□□□□ -0.38
C4A-244ENST00000460060 PIP5KL1Q5T9C9 394 aa12.69□□□□□ -0.38
C4A-244ENST00000460060 LRIG3Q6UXM1 1119 aa12.69□□□□□ -0.38
C4A-244ENST00000460060 DBX2Q6ZNG2 339 aa12.69□□□□□ -0.38
C4A-244ENST00000460060 KCNMB4Q86W47 210 aa12.69□□□□□ -0.38
C4A-244ENST00000460060 UNC5BQ8IZJ1 945 aa12.69□□□□□ -0.38
C4A-244ENST00000460060 CBARPQ8N350 705 aaPredicted RBP12.69□□□□□ -0.38
C4A-244ENST00000460060 CADM4Q8NFZ8 388 aa12.69□□□□□ -0.38
C4A-244ENST00000460060 OR6P1Q8NGX9 317 aa12.69□□□□□ -0.38
C4A-244ENST00000460060 OR2W6PQ8NHA6 318 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms