RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 ARHGAP8P85298 464 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 XIAPP98170 497 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 CDK16Q00536 496 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 PDE1BQ01064 536 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 PEX6Q13608 980 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 CHRNA6Q15825 494 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 ZNF648Q5T619 568 aaPredicted RBP12.73□□□□□ -0.37
COL18A1-206ENST00000459895 PDPK2PQ6A1A2 396 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 LRRC8BQ6P9F7 803 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 ENPP7Q6UWV6 458 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 CAND1Q86VP6 1230 aaKnown RBP12.73□□□□□ -0.37
COL18A1-206ENST00000459895 NLRP8Q86W28 1048 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 HID1Q8IV36 788 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 NAXDQ8IW45 347 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 PPIL6Q8IXY8 311 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 AGGF1Q8N302 714 aaeCLIP12.73□□□□□ -0.371e-14■■■■■ 65.8
COL18A1-206ENST00000459895 OR13J1Q8NGT2 312 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 KIF18AQ8NI77 898 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 SAP25Q8TEE9 199 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 GLYATL1Q969I3 302 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 TSACCQ96A04 125 aaPredicted RBP12.73□□□□□ -0.37
COL18A1-206ENST00000459895 CCDC97Q96F63 343 aaPredicted RBP12.73□□□□□ -0.37
COL18A1-206ENST00000459895 HIC2Q96JB3 615 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 ZNF778Q96MU6 729 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 VPS35Q96QK1 796 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 TRIM56Q9BRZ2 755 aaKnown RBP12.73□□□□□ -0.37
COL18A1-206ENST00000459895 TRIM31Q9BZY9 425 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 NLE1Q9NVX2 485 aaPredicted RBP12.73□□□□□ -0.37
COL18A1-206ENST00000459895 SMOXQ9NWM0 555 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 SLC2A6Q9UGQ3 507 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 SLC17A4Q9Y2C5 497 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 TDRD6O60522 2096 aaKnown RBP12.73□□□□□ -0.37
COL18A1-206ENST00000459895 OR51F1A6NGY5 319 aa12.72□□□□□ -0.37
COL18A1-206ENST00000459895 SLC30A4O14863 429 aa12.72□□□□□ -0.37
COL18A1-206ENST00000459895 FFAR2O15552 330 aa12.72□□□□□ -0.37
COL18A1-206ENST00000459895 PCDHGA12O60330 932 aa12.72□□□□□ -0.37
COL18A1-206ENST00000459895 PPFIA2O75334 1257 aa12.72□□□□□ -0.37
COL18A1-206ENST00000459895 MTX2O75431 263 aa12.72□□□□□ -0.37
COL18A1-206ENST00000459895 SRP72O76094 671 aaKnown RBP12.72□□□□□ -0.37
COL18A1-206ENST00000459895 SEC31AO94979 1220 aaKnown RBP12.72□□□□□ -0.37
COL18A1-206ENST00000459895 RASGRP1O95267 797 aa12.72□□□□□ -0.37
COL18A1-206ENST00000459895 TUBB4AP04350 444 aa12.72□□□□□ -0.37
COL18A1-206ENST00000459895 CEACAM5P06731 702 aa12.72□□□□□ -0.37
COL18A1-206ENST00000459895 PRSS56P0CW18 603 aa12.72□□□□□ -0.37
COL18A1-206ENST00000459895 KELP23276 732 aa12.72□□□□□ -0.37
COL18A1-206ENST00000459895 MC4RP32245 332 aa12.72□□□□□ -0.37
COL18A1-206ENST00000459895 ADCY8P40145 1251 aa12.72□□□□□ -0.37
COL18A1-206ENST00000459895 MAGEA3P43357 314 aa12.72□□□□□ -0.37
COL18A1-206ENST00000459895 RPL21P46778 160 aaKnown RBP12.72□□□□□ -0.37
COL18A1-206ENST00000459895 RXRGP48443 463 aa12.72□□□□□ -0.37
COL18A1-206ENST00000459895 HK3P52790 923 aa12.72□□□□□ -0.37
COL18A1-206ENST00000459895 PPARDQ03181 441 aa12.72□□□□□ -0.37
COL18A1-206ENST00000459895 BNIP3Q12983 259 aa12.72□□□□□ -0.37
COL18A1-206ENST00000459895 SMAD1Q15797 465 aaKnown RBP12.72□□□□□ -0.37
COL18A1-206ENST00000459895 RSPO4Q2I0M5 234 aaPredicted RBP12.72□□□□□ -0.37
COL18A1-206ENST00000459895 TSTD2Q5T7W7 516 aa12.72□□□□□ -0.37
COL18A1-206ENST00000459895 ZDHHC20Q5W0Z9 365 aa12.72□□□□□ -0.37
COL18A1-206ENST00000459895 MARK2Q7KZI7 788 aaKnown RBP12.72□□□□□ -0.37
COL18A1-206ENST00000459895 SNF8Q96H20 258 aa12.72□□□□□ -0.37
COL18A1-206ENST00000459895 IL22Q9GZX6 179 aa12.72□□□□□ -0.37
COL18A1-206ENST00000459895 CARS2Q9HA77 564 aaKnown RBP12.72□□□□□ -0.37
COL18A1-206ENST00000459895 CYP4F12Q9HCS2 524 aa12.72□□□□□ -0.37
COL18A1-206ENST00000459895 XAB2Q9HCS7 855 aaKnown RBP12.72□□□□□ -0.37
COL18A1-206ENST00000459895 SUFUQ9UMX1 484 aa12.72□□□□□ -0.37
COL18A1-206ENST00000459895 TMEM98Q9Y2Y6 226 aa12.72□□□□□ -0.37
COL18A1-206ENST00000459895 CEP250Q9BV73 2442 aa12.72□□□□□ -0.37
COL18A1-206ENST00000459895 ASCC3Q8N3C0 2202 aaKnown RBP12.72□□□□□ -0.37
COL18A1-206ENST00000459895 H7C0S8 307 aa12.71□□□□□ -0.37
COL18A1-206ENST00000459895 TP73O15350 636 aa12.71□□□□□ -0.37
COL18A1-206ENST00000459895 FLRT2O43155 660 aa12.71□□□□□ -0.37
COL18A1-206ENST00000459895 AQP9O43315 295 aa12.71□□□□□ -0.37
COL18A1-206ENST00000459895 DFNA5O60443 496 aa12.71□□□□□ -0.37
COL18A1-206ENST00000459895 BANF1O75531 89 aa12.71□□□□□ -0.37
COL18A1-206ENST00000459895 FUCA1P04066 466 aa12.71□□□□□ -0.37
COL18A1-206ENST00000459895 DGKAP23743 735 aa12.71□□□□□ -0.37
COL18A1-206ENST00000459895 PSMA3P25788 255 aa12.71□□□□□ -0.37
COL18A1-206ENST00000459895 HADHAP40939 763 aa12.71□□□□□ -0.37
COL18A1-206ENST00000459895 GNPDA1P46926 289 aa12.71□□□□□ -0.37
COL18A1-206ENST00000459895 HNRNPKP61978 463 aaKnown RBP eCLIP12.71□□□□□ -0.371e-7■□□□□ 11.1
COL18A1-206ENST00000459895 ACVR1Q04771 509 aa12.71□□□□□ -0.37
COL18A1-206ENST00000459895 NFATC2Q13469 925 aa12.71□□□□□ -0.37
COL18A1-206ENST00000459895 ITGA9Q13797 1035 aa12.71□□□□□ -0.37
COL18A1-206ENST00000459895 PRRT3Q5FWE3 981 aa12.71□□□□□ -0.37
COL18A1-206ENST00000459895 GPRC6AQ5T6X5 926 aa12.71□□□□□ -0.37
COL18A1-206ENST00000459895 C8orf74Q6P047 294 aa12.71□□□□□ -0.37
COL18A1-206ENST00000459895 RD3Q7Z3Z2 195 aa12.71□□□□□ -0.37
COL18A1-206ENST00000459895 HOOK3Q86VS8 718 aa12.71□□□□□ -0.37
COL18A1-206ENST00000459895 NOA1Q8NC60 698 aaKnown RBP12.71□□□□□ -0.37
COL18A1-206ENST00000459895 MCUQ8NE86 351 aa12.71□□□□□ -0.37
COL18A1-206ENST00000459895 DDHD1Q8NEL9 900 aa12.71□□□□□ -0.37
COL18A1-206ENST00000459895 BAHD1Q8TBE0 780 aaPredicted RBP12.71□□□□□ -0.37
COL18A1-206ENST00000459895 STYXQ8WUJ0 223 aa12.71□□□□□ -0.37
COL18A1-206ENST00000459895 BTN2A2Q8WVV5 523 aa12.71□□□□□ -0.37
COL18A1-206ENST00000459895 CAMK1GQ96NX5 476 aa12.71□□□□□ -0.37
COL18A1-206ENST00000459895 C19orf43Q9BQ61 176 aa12.71□□□□□ -0.37
COL18A1-206ENST00000459895 CLPBQ9H078 707 aa12.71□□□□□ -0.37
COL18A1-206ENST00000459895 DPH5Q9H2P9 285 aa12.71□□□□□ -0.37
COL18A1-206ENST00000459895 VPS18Q9P253 973 aa12.71□□□□□ -0.37
COL18A1-206ENST00000459895 MOSPD1Q9UJG1 213 aa12.71□□□□□ -0.37
COL18A1-206ENST00000459895 PCDHGB2Q9Y5G2 931 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms