RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 LRIT1Q9P2V4 623 aa16■□□□□ 0.15
COL7A1-203ENST00000459756 AMFRQ9UKV5 643 aa16■□□□□ 0.15
COL7A1-203ENST00000459756 ENTPD2Q9Y5L3 495 aa16■□□□□ 0.15
COL7A1-203ENST00000459756 ST14Q9Y5Y6 855 aa16■□□□□ 0.15
COL7A1-203ENST00000459756 RNF215Q9Y6U7 377 aa16■□□□□ 0.15
COL7A1-203ENST00000459756 NBEAQ8NFP9 2946 aa16■□□□□ 0.15
COL7A1-203ENST00000459756 MACROD2A1Z1Q3 448 aa15.99■□□□□ 0.15
COL7A1-203ENST00000459756 MIF4GDA9UHW6 222 aaKnown RBP15.99■□□□□ 0.15
COL7A1-203ENST00000459756 D6RAR5 112 aa15.99■□□□□ 0.15
COL7A1-203ENST00000459756 TMX2-CTNND1H3BSU7 103 aa15.99■□□□□ 0.15
COL7A1-203ENST00000459756 TJP3O95049 919 aa15.99■□□□□ 0.15
COL7A1-203ENST00000459756 SLC4A1P02730 911 aa15.99■□□□□ 0.15
COL7A1-203ENST00000459756 MPOP05164 745 aa15.99■□□□□ 0.15
COL7A1-203ENST00000459756 RPLP0P05388 317 aaKnown RBP15.99■□□□□ 0.15
COL7A1-203ENST00000459756 OTUD4Q01804 1114 aaKnown RBP15.99■□□□□ 0.15
COL7A1-203ENST00000459756 MPP3Q13368 585 aa15.99■□□□□ 0.15
COL7A1-203ENST00000459756 TBC1D25Q3MII6 688 aa15.99■□□□□ 0.15
COL7A1-203ENST00000459756 PDPK2PQ6A1A2 396 aa15.99■□□□□ 0.15
COL7A1-203ENST00000459756 SPRED1Q7Z699 444 aa15.99■□□□□ 0.15
COL7A1-203ENST00000459756 CDKL3Q8IVW4 592 aaPredicted RBP15.99■□□□□ 0.15
COL7A1-203ENST00000459756 UBL4BQ8N7F7 174 aa15.99■□□□□ 0.15
COL7A1-203ENST00000459756 GPR26Q8NDV2 337 aa15.99■□□□□ 0.15
COL7A1-203ENST00000459756 OXNAD1Q96HP4 312 aaPredicted RBP15.99■□□□□ 0.15
COL7A1-203ENST00000459756 MRGPRX2Q96LB1 330 aa15.99■□□□□ 0.15
COL7A1-203ENST00000459756 ZNF578Q96N58 590 aaPredicted RBP15.99■□□□□ 0.15
COL7A1-203ENST00000459756 HERPUD2Q9BSE4 406 aa15.99■□□□□ 0.15
COL7A1-203ENST00000459756 SPATA16Q9BXB7 569 aa15.99■□□□□ 0.15
COL7A1-203ENST00000459756 TRABDQ9H4I3 376 aa15.99■□□□□ 0.15
COL7A1-203ENST00000459756 RSPH14Q9UHP6 348 aa15.99■□□□□ 0.15
COL7A1-203ENST00000459756 SPO11Q9Y5K1 396 aa15.99■□□□□ 0.15
COL7A1-203ENST00000459756 OAS3Q9Y6K5 1087 aaKnown RBP15.99■□□□□ 0.15
COL7A1-203ENST00000459756 A0A1W2PQM1 296 aa15.98■□□□□ 0.15
COL7A1-203ENST00000459756 CASC3O15234 703 aaKnown RBP15.98■□□□□ 0.15
COL7A1-203ENST00000459756 ZW10O43264 779 aa15.98■□□□□ 0.15
COL7A1-203ENST00000459756 TLX3O43711 291 aaPredicted RBP15.98■□□□□ 0.15
COL7A1-203ENST00000459756 ZNF189O75820 626 aaPredicted RBP15.98■□□□□ 0.15
COL7A1-203ENST00000459756 STK10O94804 968 aaKnown RBP15.98■□□□□ 0.15
COL7A1-203ENST00000459756 ATP1A1P05023 1023 aaKnown RBP15.98■□□□□ 0.15
COL7A1-203ENST00000459756 PYGMP11217 842 aa15.98■□□□□ 0.15
COL7A1-203ENST00000459756 RBL1P28749 1068 aa15.98■□□□□ 0.15
COL7A1-203ENST00000459756 EIF2S3P41091 472 aaKnown RBP15.98■□□□□ 0.15
COL7A1-203ENST00000459756 ACTR1BP42025 376 aa15.98■□□□□ 0.15
COL7A1-203ENST00000459756 PDX1P52945 283 aa15.98■□□□□ 0.15
COL7A1-203ENST00000459756 EIF3EP60228 445 aaKnown RBP15.98■□□□□ 0.15
COL7A1-203ENST00000459756 ACTR1AP61163 376 aa15.98■□□□□ 0.15
COL7A1-203ENST00000459756 SIRPB2Q5JXA9 342 aa15.98■□□□□ 0.15
COL7A1-203ENST00000459756 ZNF569Q5MCW4 686 aa15.98■□□□□ 0.15
COL7A1-203ENST00000459756 ALS2CLQ60I27 953 aa15.98■□□□□ 0.15
COL7A1-203ENST00000459756 ITPRIPL1Q6GPH6 555 aa15.98■□□□□ 0.15
COL7A1-203ENST00000459756 IGF2-ASQ6U949 168 aa15.98■□□□□ 0.15
COL7A1-203ENST00000459756 ZNF438Q7Z4V0 828 aa15.98■□□□□ 0.15
COL7A1-203ENST00000459756 ARL14Q8N4G2 192 aa15.98■□□□□ 0.15
COL7A1-203ENST00000459756 TRAM1L1Q8N609 369 aa15.98■□□□□ 0.15
COL7A1-203ENST00000459756 Q8N9G6 341 aaPredicted RBP15.98■□□□□ 0.15
COL7A1-203ENST00000459756 DCBLD2Q96PD2 775 aa15.98■□□□□ 0.15
COL7A1-203ENST00000459756 GBA3Q9H227 469 aa15.98■□□□□ 0.15
COL7A1-203ENST00000459756 HACD3Q9P035 362 aa15.98■□□□□ 0.15
COL7A1-203ENST00000459756 TRIM10Q9UDY6 481 aa15.98■□□□□ 0.15
COL7A1-203ENST00000459756 ZNHIT2Q9UHR6 403 aa15.98■□□□□ 0.15
COL7A1-203ENST00000459756 SATB2Q9UPW6 733 aa15.98■□□□□ 0.15
COL7A1-203ENST00000459756 PLEKHM1Q9Y4G2 1056 aa15.98■□□□□ 0.15
COL7A1-203ENST00000459756 FAM208BQ5VWN6 2430 aa15.98■□□□□ 0.15
COL7A1-203ENST00000459756 ADAMTS20P59510 1910 aa15.98■□□□□ 0.15
COL7A1-203ENST00000459756 CCDC187A0A096LP49 1063 aa15.97■□□□□ 0.15
COL7A1-203ENST00000459756 RHPN2P1A8MT19 583 aa15.97■□□□□ 0.15
COL7A1-203ENST00000459756 GPR89AB7ZAQ6 455 aa15.97■□□□□ 0.15
COL7A1-203ENST00000459756 AURKAO14965 403 aa15.97■□□□□ 0.15
COL7A1-203ENST00000459756 RRP8O43159 456 aaKnown RBP15.97■□□□□ 0.15
COL7A1-203ENST00000459756 DNAJC6O75061 913 aa15.97■□□□□ 0.15
COL7A1-203ENST00000459756 ANXA9O76027 345 aa15.97■□□□□ 0.15
COL7A1-203ENST00000459756 ECEL1O95672 775 aa15.97■□□□□ 0.15
COL7A1-203ENST00000459756 GPR89BP0CG08 455 aa15.97■□□□□ 0.15
COL7A1-203ENST00000459756 RBP3P10745 1247 aa15.97■□□□□ 0.15
COL7A1-203ENST00000459756 BPIP17213 487 aa15.97■□□□□ 0.15
COL7A1-203ENST00000459756 HLA-DPA1P20036 260 aa15.97■□□□□ 0.15
COL7A1-203ENST00000459756 HMGCLP35914 325 aa15.97■□□□□ 0.15
COL7A1-203ENST00000459756 MAZP56270 477 aaKnown RBP15.97■□□□□ 0.15
COL7A1-203ENST00000459756 GSDMDP57764 484 aa15.97■□□□□ 0.15
COL7A1-203ENST00000459756 ERVPABLB-1P60509 514 aa15.97■□□□□ 0.15
COL7A1-203ENST00000459756 BIRC2Q13490 618 aa15.97■□□□□ 0.15
COL7A1-203ENST00000459756 SLC1A5Q15758 541 aa15.97■□□□□ 0.15
COL7A1-203ENST00000459756 C3orf38Q5JPI3 329 aa15.97■□□□□ 0.15
COL7A1-203ENST00000459756 C19orf48Q6RUI8 117 aa15.97■□□□□ 0.15
COL7A1-203ENST00000459756 NAGSQ8N159 534 aa15.97■□□□□ 0.15
COL7A1-203ENST00000459756 RNF10Q8N5U6 811 aaKnown RBP15.97■□□□□ 0.15
COL7A1-203ENST00000459756 IPMKQ8NFU5 416 aa15.97■□□□□ 0.15
COL7A1-203ENST00000459756 WDR36Q8NI36 951 aaKnown RBP15.97■□□□□ 0.15
COL7A1-203ENST00000459756 HNRNPLLQ8WVV9 542 aaKnown RBP15.97■□□□□ 0.15
COL7A1-203ENST00000459756 LIN37Q96GY3 246 aaPredicted RBP15.97■□□□□ 0.15
COL7A1-203ENST00000459756 TMEM74Q96NL1 305 aa15.97■□□□□ 0.15
COL7A1-203ENST00000459756 PLEKHG4BQ96PX9 1271 aa15.97■□□□□ 0.15
COL7A1-203ENST00000459756 FSD1LQ9BXM9 530 aa15.97■□□□□ 0.15
COL7A1-203ENST00000459756 STRADBQ9C0K7 418 aa15.97■□□□□ 0.15
COL7A1-203ENST00000459756 CARD9Q9H257 536 aa15.97■□□□□ 0.15
COL7A1-203ENST00000459756 TRIM39Q9HCM9 518 aa15.97■□□□□ 0.15
COL7A1-203ENST00000459756 LHX6Q9UPM6 363 aa15.97■□□□□ 0.15
COL7A1-203ENST00000459756 PCDHGA8Q9Y5G5 932 aa15.97■□□□□ 0.15
COL7A1-203ENST00000459756 ZFC3H1O60293 1989 aaKnown RBP15.96■□□□□ 0.15
COL7A1-203ENST00000459756 GOLGA6L9A6NEM1 432 aa15.96■□□□□ 0.15
COL7A1-203ENST00000459756 F5H423 210 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms