RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 RBP1P09455 135 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 BMPR1AP36894 532 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 TGFBR1P36897 503 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 SCNN1AP37088 669 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 POLD2P49005 469 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 HNRNPFP52597 415 aaKnown RBP10.27□□□□□ -0.77
CLIP4-208ENST00000456385 CD47Q08722 323 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 SEMA3BQ13214 749 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 LAPTM5Q13571 262 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 NOL9Q5SY16 702 aaKnown RBP10.27□□□□□ -0.77
CLIP4-208ENST00000456385 PRAMEF18Q5VWM3 479 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 RNF19BQ6ZMZ0 732 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 RIMKLAQ8IXN7 391 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 RYBPQ8N488 228 aaPredicted RBP10.27□□□□□ -0.77
CLIP4-208ENST00000456385 MINDY2Q8NBR6 621 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 LEMD2Q8NC56 503 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 PSMA8Q8TAA3 256 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 S100ZQ8WXG8 99 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 HDAC2Q92769 488 aaKnown RBP10.27□□□□□ -0.77
CLIP4-208ENST00000456385 COPS5Q92905 334 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 WNT8BQ93098 351 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 PTERQ96BW5 349 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 DHRS1Q96LJ7 313 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 R3HDMLQ9H3Y0 253 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 NOL6Q9H6R4 1146 aaKnown RBP10.27□□□□□ -0.77
CLIP4-208ENST00000456385 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.27□□□□□ -0.77
CLIP4-208ENST00000456385 GDAP2Q9NXN4 497 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 POLG2Q9UHN1 485 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 EVPLQ92817 2033 aa10.27□□□□□ -0.77
CLIP4-208ENST00000456385 RLFQ13129 1914 aa10.26□□□□□ -0.77
CLIP4-208ENST00000456385 PARP14Q460N5 1801 aa10.26□□□□□ -0.77
CLIP4-208ENST00000456385 COL4A5P29400 1685 aa10.26□□□□□ -0.77
CLIP4-208ENST00000456385 A0A1W2PP18 115 aa10.26□□□□□ -0.77
CLIP4-208ENST00000456385 C16orf96A6NNT2 1141 aa10.26□□□□□ -0.77
CLIP4-208ENST00000456385 M0R3G1 203 aa10.26□□□□□ -0.77
CLIP4-208ENST00000456385 CCL22O00626 93 aa10.26□□□□□ -0.77
CLIP4-208ENST00000456385 NCAM2O15394 837 aa10.26□□□□□ -0.77
CLIP4-208ENST00000456385 XPNPEP2O43895 674 aa10.26□□□□□ -0.77
CLIP4-208ENST00000456385 PMPCBO75439 489 aa10.26□□□□□ -0.77
CLIP4-208ENST00000456385 FYNP06241 537 aa10.26□□□□□ -0.77
CLIP4-208ENST00000456385 MYL3P08590 195 aa10.26□□□□□ -0.77
CLIP4-208ENST00000456385 UMPSP11172 480 aa10.26□□□□□ -0.77
CLIP4-208ENST00000456385 ACADSBP45954 432 aa10.26□□□□□ -0.77
CLIP4-208ENST00000456385 BAG6P46379 1132 aa10.26□□□□□ -0.77
CLIP4-208ENST00000456385 CDKN2DP55273 166 aa10.26□□□□□ -0.77
CLIP4-208ENST00000456385 EMX1Q04741 257 aaPredicted RBP10.26□□□□□ -0.77
CLIP4-208ENST00000456385 CAMK2BQ13554 666 aa10.26□□□□□ -0.77
CLIP4-208ENST00000456385 NBPF12Q5TAG4 269 aaPredicted RBP10.26□□□□□ -0.77
CLIP4-208ENST00000456385 CYP2U1Q7Z449 544 aa10.26□□□□□ -0.77
CLIP4-208ENST00000456385 ISCA2Q86U28 154 aa10.26□□□□□ -0.77
CLIP4-208ENST00000456385 SLC22A9Q8IVM8 553 aa10.26□□□□□ -0.77
CLIP4-208ENST00000456385 FAM86B1Q8N7N1 296 aa10.26□□□□□ -0.77
CLIP4-208ENST00000456385 PPHLN1Q8NEY8 458 aaKnown RBP10.26□□□□□ -0.77
CLIP4-208ENST00000456385 NUDT8Q8WV74 236 aa10.26□□□□□ -0.77
CLIP4-208ENST00000456385 DPF3Q92784 378 aa10.26□□□□□ -0.77
CLIP4-208ENST00000456385 ITCHQ96J02 903 aa10.26□□□□□ -0.77
CLIP4-208ENST00000456385 HSFY1Q96LI6 401 aa10.26□□□□□ -0.77
CLIP4-208ENST00000456385 CAMKK2Q96RR4 588 aa10.26□□□□□ -0.77
CLIP4-208ENST00000456385 MBOAT4Q96T53 435 aa10.26□□□□□ -0.77
CLIP4-208ENST00000456385 HOXD1Q9GZZ0 328 aa10.26□□□□□ -0.77
CLIP4-208ENST00000456385 TP63Q9H3D4 680 aaPredicted RBP10.26□□□□□ -0.77
CLIP4-208ENST00000456385 SMOC2Q9H3U7 446 aa10.26□□□□□ -0.77
CLIP4-208ENST00000456385 WDR6Q9NNW5 1121 aaKnown RBP10.26□□□□□ -0.77
CLIP4-208ENST00000456385 AKT3Q9Y243 479 aa10.26□□□□□ -0.77
CLIP4-208ENST00000456385 SSC5DA1L4H1 1573 aa10.25□□□□□ -0.77
CLIP4-208ENST00000456385 ANKRD34BA5PLL1 514 aa10.25□□□□□ -0.77
CLIP4-208ENST00000456385 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.25□□□□□ -0.77
CLIP4-208ENST00000456385 CNTN5O94779 1100 aa10.25□□□□□ -0.77
CLIP4-208ENST00000456385 MATN4O95460 622 aa10.25□□□□□ -0.77
CLIP4-208ENST00000456385 C1RP00736 705 aa10.25□□□□□ -0.77
CLIP4-208ENST00000456385 MAGP20916 626 aa10.25□□□□□ -0.77
CLIP4-208ENST00000456385 MTHFRP42898 656 aa10.25□□□□□ -0.77
CLIP4-208ENST00000456385 ZFP36L2P47974 494 aaKnown RBP10.25□□□□□ -0.77
CLIP4-208ENST00000456385 UFM1P61960 85 aa10.25□□□□□ -0.77
CLIP4-208ENST00000456385 NCS1P62166 190 aa10.25□□□□□ -0.77
CLIP4-208ENST00000456385 HERVK_113P63132 956 aa10.25□□□□□ -0.77
CLIP4-208ENST00000456385 PLA2G4EQ3MJ16 856 aa10.25□□□□□ -0.77
CLIP4-208ENST00000456385 HECTD2Q5U5R9 776 aa10.25□□□□□ -0.77
CLIP4-208ENST00000456385 GLYATQ6IB77 296 aa10.25□□□□□ -0.77
CLIP4-208ENST00000456385 CATSPERGQ6ZRH7 1159 aa10.25□□□□□ -0.77
CLIP4-208ENST00000456385 AKAP14Q86UN6 197 aa10.25□□□□□ -0.77
CLIP4-208ENST00000456385 SULF1Q8IWU6 871 aa10.25□□□□□ -0.77
CLIP4-208ENST00000456385 ABI1Q8IZP0 508 aa10.25□□□□□ -0.77
CLIP4-208ENST00000456385 OR6Q1Q8NGQ2 317 aa10.25□□□□□ -0.77
CLIP4-208ENST00000456385 SPATA33Q96N06 139 aa10.25□□□□□ -0.77
CLIP4-208ENST00000456385 NODALQ96S42 347 aa10.25□□□□□ -0.77
CLIP4-208ENST00000456385 BTBD2Q9BX70 525 aa10.25□□□□□ -0.77
CLIP4-208ENST00000456385 ERVK-6Q9BXR3 956 aa10.25□□□□□ -0.77
CLIP4-208ENST00000456385 MIR1-1HGQ9H1L0 117 aa10.25□□□□□ -0.77
CLIP4-208ENST00000456385 MRM3Q9HC36 420 aaKnown RBP10.25□□□□□ -0.77
CLIP4-208ENST00000456385 TREX1Q9NSU2 369 aa10.25□□□□□ -0.77
CLIP4-208ENST00000456385 AASSQ9UDR5 926 aa10.25□□□□□ -0.77
CLIP4-208ENST00000456385 UTS2RQ9UKP6 389 aa10.25□□□□□ -0.77
CLIP4-208ENST00000456385 STAP1Q9ULZ2 295 aa10.25□□□□□ -0.77
CLIP4-208ENST00000456385 SNX5Q9Y5X3 404 aa10.25□□□□□ -0.77
CLIP4-208ENST00000456385 THSD7AQ9UPZ6 1657 aa10.25□□□□□ -0.77
CLIP4-208ENST00000456385 ZNF99A8MXY4 864 aaPredicted RBP10.25□□□□□ -0.77
CLIP4-208ENST00000456385 G3V2T6 193 aa10.25□□□□□ -0.77
CLIP4-208ENST00000456385 DFFAO00273 331 aa10.25□□□□□ -0.77
CLIP4-208ENST00000456385 AZIN1O14977 448 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms