RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 TCF4P15884 667 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 ERCC2P18074 760 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 PSMA2P25787 234 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 RBMS1P29558 406 aaKnown RBP4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 MIPP30301 263 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 CCNFP41002 786 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 ETV3P41162 512 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 SCNN1BP51168 640 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 HK3P52790 923 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 PDX1P52945 283 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 GSCP56915 257 aaPredicted RBP4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 YBEYP58557 167 aaPredicted RBP4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 SRP54P61011 504 aaKnown RBP4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 YPEL5P62699 121 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 MYL5Q02045 173 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 SLC10A7Q0GE19 358 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 SRSF6Q13247 344 aaKnown RBP4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 LY6DQ14210 128 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 ALG11Q2TAA5 492 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 TAF1BQ53T94 588 aaPredicted RBP4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 PPP6R3Q5H9R7 873 aaPredicted RBP4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 FAM182AQ5T1J6 154 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 ERMARDQ5T6L9 678 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 KIAA1614Q5VZ46 1190 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 DENND2CQ68D51 928 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 RBM44Q6ZP01 1051 aaKnown RBP4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 CLEC17AQ6ZS10 378 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 B3GNT8Q7Z7M8 397 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 SRLQ86TD4 932 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 LSMEM2Q8N112 164 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 UMODL1-AS1Q8N2C9 162 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 PELI3Q8N2H9 469 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 ZNF843Q8N446 348 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 AOPEPQ8N6M6 819 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 KYQ8NBH2 561 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 ZNF248Q8NDW4 579 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 DENND6BQ8NEG7 585 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 ANKRD20A12PQ8NF67 263 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 CCL4L1Q8NHW4 92 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 PCDH19Q8TAB3 1148 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 BTN2A2Q8WVV5 523 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 KCNE4Q8WWG9 221 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 ARHGEF26Q96DR7 871 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 DHRS1Q96LJ7 313 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 NAP1L5Q96NT1 182 aaPredicted RBP4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 SLC46A1Q96NT5 459 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 CCDC3Q9BQI4 270 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 CNPY3Q9BT09 278 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 SYT11Q9BT88 431 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 SNRNP25Q9BV90 132 aaKnown RBP4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 OSBPL1AQ9BXW6 950 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 EDEM3Q9BZQ6 932 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 FOXP3Q9BZS1 431 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 SEMA4CQ9C0C4 833 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 HAUS4Q9H6D7 363 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 RETREG1Q9H6L5 497 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 LRRC19Q9H756 370 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 SUDS3Q9H7L9 328 aaPredicted RBP4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 PDFQ9HBH1 243 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 ASCL3Q9NQ33 180 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 ANO10Q9NW15 660 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 MYO1AQ9UBC5 1043 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 DKK3Q9UBP4 350 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 UBA2Q9UBT2 640 aaPredicted RBP4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 GPR34Q9UPC5 381 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 ZNF451Q9Y4E5 1061 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 LOC400499M0QZD8 3231 aa4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 DSPP15924 2871 aaKnown RBP4.71□□□□□ -1.66
GTF3C3-208ENST00000455546 SDK2Q58EX2 2172 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 CXorf51AA0A1B0GTR3 108 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 A0A1W2PQM1 296 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 TLDC2A0PJX2 215 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 TMEM202A6NGA9 273 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 TMEM191CA6NGB0 347 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 ARHGAP42A6NI28 874 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 LRRC53A6NM62 1247 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 DDX3XO00571 662 aaKnown RBP eCLIP4.7□□□□□ -1.663e-7■■■□□ 17.5
GTF3C3-208ENST00000455546 TRAFD1O14545 582 aaPredicted RBP4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 SHOXO15266 292 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 RECQL5O94762 991 aaPredicted RBP4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 TNFP01375 233 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 F13BP05160 661 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 RPLP0P05388 317 aaKnown RBP4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 FERP16591 822 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 GM2AP17900 193 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 IL1R2P27930 398 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 HTR1BP28222 390 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 SLC5A2P31639 672 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 PEX5P50542 639 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 NDST2P52849 883 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 ERVPABLB-1P60509 514 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 MAXP61244 160 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 RNF4P78317 190 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 BCL2L1Q07817 233 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 ELP6Q0PNE2 266 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 RALGDSQ12967 914 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 SPIDRQ14159 915 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 ACOX1Q15067 660 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 ELOCQ15369 112 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 TGIF1Q15583 401 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms