RNA–Protein interactions for RNA: ENST00000453358.5

PTPA-224, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4

Gene PTPA, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-224ENST00000453358 SH3KBP1Q96B97 665 aa12.81□□□□□ -0.36
PTPA-224ENST00000453358 RIOK2Q9BVS4 552 aaKnown RBP12.81□□□□□ -0.36
PTPA-224ENST00000453358 ZWILCHQ9H900 591 aa12.81□□□□□ -0.36
PTPA-224ENST00000453358 ZNHIT2Q9UHR6 403 aa12.81□□□□□ -0.36
PTPA-224ENST00000453358 CNOT6Q9ULM6 557 aaKnown RBP12.81□□□□□ -0.36
PTPA-224ENST00000453358 KCNK6Q9Y257 313 aa12.81□□□□□ -0.36
PTPA-224ENST00000453358 MN1Q10571 1320 aaPredicted RBP12.81□□□□□ -0.36
PTPA-224ENST00000453358 CREBBPQ92793 2442 aa12.8□□□□□ -0.36
PTPA-224ENST00000453358 LGALS16A8MUM7 142 aa12.8□□□□□ -0.36
PTPA-224ENST00000453358 TMCO5BA8MYB1 307 aa12.8□□□□□ -0.36
PTPA-224ENST00000453358 MKRN2OSH3BPM6 223 aa12.8□□□□□ -0.36
PTPA-224ENST00000453358 H3BRJ5 948 aa12.8□□□□□ -0.36
PTPA-224ENST00000453358 INPP4BO15327 924 aa12.8□□□□□ -0.36
PTPA-224ENST00000453358 RNF8O76064 485 aa12.8□□□□□ -0.36
PTPA-224ENST00000453358 ASMTLO95671 621 aa12.8□□□□□ -0.36
PTPA-224ENST00000453358 KRT7P08729 469 aa12.8□□□□□ -0.36
PTPA-224ENST00000453358 FURINP09958 794 aa12.8□□□□□ -0.36
PTPA-224ENST00000453358 ANKRD34CP0C6C1 535 aa12.8□□□□□ -0.36
PTPA-224ENST00000453358 FERP16591 822 aa12.8□□□□□ -0.36
PTPA-224ENST00000453358 ZNF30P17039 623 aa12.8□□□□□ -0.36
PTPA-224ENST00000453358 DLSTP36957 453 aa12.8□□□□□ -0.36
PTPA-224ENST00000453358 MMP13P45452 471 aa12.8□□□□□ -0.36
PTPA-224ENST00000453358 NOP2P46087 812 aaKnown RBP12.8□□□□□ -0.36
PTPA-224ENST00000453358 STC1P52823 247 aa12.8□□□□□ -0.36
PTPA-224ENST00000453358 MARC1Q5VT66 337 aa12.8□□□□□ -0.36
PTPA-224ENST00000453358 TMCO3Q6UWJ1 677 aa12.8□□□□□ -0.36
PTPA-224ENST00000453358 CHST15Q7LFX5 561 aaPredicted RBP12.8□□□□□ -0.36
PTPA-224ENST00000453358 SLC9B2Q86UD5 537 aa12.8□□□□□ -0.36
PTPA-224ENST00000453358 CCDC13Q8IYE1 715 aa12.8□□□□□ -0.36
PTPA-224ENST00000453358 ATPAF2Q8N5M1 289 aa12.8□□□□□ -0.36
PTPA-224ENST00000453358 EXD1Q8NHP7 514 aa12.8□□□□□ -0.36
PTPA-224ENST00000453358 RNF31Q96EP0 1072 aa12.8□□□□□ -0.36
PTPA-224ENST00000453358 HERPUD2Q9BSE4 406 aa12.8□□□□□ -0.36
PTPA-224ENST00000453358 TBC1D10AQ9BXI6 508 aa12.8□□□□□ -0.36
PTPA-224ENST00000453358 ULBP3Q9BZM4 244 aa12.8□□□□□ -0.36
PTPA-224ENST00000453358 NUP62CLQ9H1M0 184 aa12.8□□□□□ -0.36
PTPA-224ENST00000453358 EPB41L1Q9H4G0 881 aa12.8□□□□□ -0.36
PTPA-224ENST00000453358 STN1Q9H668 368 aaKnown RBP12.8□□□□□ -0.36
PTPA-224ENST00000453358 FANCLQ9NW38 375 aa12.8□□□□□ -0.36
PTPA-224ENST00000453358 VPS18Q9P253 973 aa12.8□□□□□ -0.36
PTPA-224ENST00000453358 CNOT8Q9UFF9 292 aaKnown RBP12.8□□□□□ -0.36
PTPA-224ENST00000453358 CROTQ9UKG9 612 aa12.8□□□□□ -0.36
PTPA-224ENST00000453358 A0A0J9YYE9 177 aa12.79□□□□□ -0.36
PTPA-224ENST00000453358 TRBC1P01850 177 aa12.79□□□□□ -0.36
PTPA-224ENST00000453358 ATP1A1P05023 1023 aaKnown RBP12.79□□□□□ -0.36
PTPA-224ENST00000453358 ACP5P13686 325 aa12.79□□□□□ -0.36
PTPA-224ENST00000453358 F3P13726 295 aa12.79□□□□□ -0.36
PTPA-224ENST00000453358 IL1R2P27930 398 aa12.79□□□□□ -0.36
PTPA-224ENST00000453358 UQCRFS1P47985 274 aa12.79□□□□□ -0.36
PTPA-224ENST00000453358 CDH6P55285 790 aa12.79□□□□□ -0.36
PTPA-224ENST00000453358 GFERP55789 205 aa12.79□□□□□ -0.36
PTPA-224ENST00000453358 ERV3-1Q14264 604 aa12.79□□□□□ -0.36
PTPA-224ENST00000453358 IHHQ14623 411 aa12.79□□□□□ -0.36
PTPA-224ENST00000453358 DPYSL2Q16555 572 aa12.79□□□□□ -0.36
PTPA-224ENST00000453358 PPP1R2P3Q6NXS1 205 aa12.79□□□□□ -0.36
PTPA-224ENST00000453358 C6orf15Q6UXA7 325 aaPredicted RBP12.79□□□□□ -0.36
PTPA-224ENST00000453358 ASB18Q6ZVZ8 466 aa12.79□□□□□ -0.36
PTPA-224ENST00000453358 IRF2BP2Q7Z5L9 587 aa12.79□□□□□ -0.36
PTPA-224ENST00000453358 POLNQ7Z5Q5 900 aa12.79□□□□□ -0.36
PTPA-224ENST00000453358 PLXDC1Q8IUK5 500 aa12.79□□□□□ -0.36
PTPA-224ENST00000453358 NDUFAF2Q8N183 169 aa12.79□□□□□ -0.36
PTPA-224ENST00000453358 TEX26Q8N6G2 289 aa12.79□□□□□ -0.36
PTPA-224ENST00000453358 NSMCE1Q8WV22 266 aa12.79□□□□□ -0.36
PTPA-224ENST00000453358 CSPG4P5Q96PW8 444 aa12.79□□□□□ -0.36
PTPA-224ENST00000453358 ERGIC2Q96RQ1 377 aa12.79□□□□□ -0.36
PTPA-224ENST00000453358 NT5MQ9NPB1 228 aa12.79□□□□□ -0.36
PTPA-224ENST00000453358 PRDM8Q9NQV8 689 aa12.79□□□□□ -0.36
PTPA-224ENST00000453358 CPNE7Q9UBL6 633 aa12.79□□□□□ -0.36
PTPA-224ENST00000453358 TLK1Q9UKI8 766 aa12.79□□□□□ -0.36
PTPA-224ENST00000453358 POLHQ9Y253 713 aa12.79□□□□□ -0.36
PTPA-224ENST00000453358 PCDHB3Q9Y5E6 796 aa12.79□□□□□ -0.36
PTPA-224ENST00000453358 KIR2DS5A0A0G2JLQ3 304 aa12.78□□□□□ -0.36
PTPA-224ENST00000453358 A0A0G2JNG1 304 aa12.78□□□□□ -0.36
PTPA-224ENST00000453358 LILRA5A6NI73 299 aa12.78□□□□□ -0.36
PTPA-224ENST00000453358 KIR2DS3K7RE56 304 aa12.78□□□□□ -0.36
PTPA-224ENST00000453358 SNX2O60749 519 aa12.78□□□□□ -0.36
PTPA-224ENST00000453358 RFPL1O75677 317 aa12.78□□□□□ -0.36
PTPA-224ENST00000453358 C9P02748 559 aa12.78□□□□□ -0.36
PTPA-224ENST00000453358 PDGFAP04085 211 aa12.78□□□□□ -0.36
PTPA-224ENST00000453358 ATP1A3P13637 1013 aa12.78□□□□□ -0.36
PTPA-224ENST00000453358 SLC2A4P14672 509 aa12.78□□□□□ -0.36
PTPA-224ENST00000453358 TCF4P15884 667 aa12.78□□□□□ -0.36
PTPA-224ENST00000453358 ARL4AP40617 200 aa12.78□□□□□ -0.36
PTPA-224ENST00000453358 PMS2P54278 862 aa12.78□□□□□ -0.36
PTPA-224ENST00000453358 UBE2IP63279 158 aaKnown RBP12.78□□□□□ -0.36
PTPA-224ENST00000453358 UBXN1Q04323 297 aa12.78□□□□□ -0.36
PTPA-224ENST00000453358 FOXM1Q08050 763 aa12.78□□□□□ -0.36
PTPA-224ENST00000453358 KIR2DS5Q14953 304 aa12.78□□□□□ -0.36
PTPA-224ENST00000453358 SMTNL2Q2TAL5 461 aa12.78□□□□□ -0.36
PTPA-224ENST00000453358 CAPRIN2Q6IMN6 1127 aaKnown RBP12.78□□□□□ -0.36
PTPA-224ENST00000453358 LYSMD3Q7Z3D4 306 aa12.78□□□□□ -0.36
PTPA-224ENST00000453358 TMEM135Q86UB9 458 aa12.78□□□□□ -0.36
PTPA-224ENST00000453358 GALNT6Q8NCL4 622 aa12.78□□□□□ -0.36
PTPA-224ENST00000453358 C9orf72Q96LT7 481 aa12.78□□□□□ -0.36
PTPA-224ENST00000453358 WDR24Q96S15 920 aa12.78□□□□□ -0.36
PTPA-224ENST00000453358 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.78□□□□□ -0.36
PTPA-224ENST00000453358 OGFRQ9NZT2 677 aa12.78□□□□□ -0.36
PTPA-224ENST00000453358 PLEKHB1Q9UF11 243 aaPredicted RBP12.78□□□□□ -0.36
PTPA-224ENST00000453358 LIMA1Q9UHB6 759 aaKnown RBP12.78□□□□□ -0.36
PTPA-224ENST00000453358 OR5K4A6NMS3 321 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms