RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 COX14Q96I36 57 aa19.82■□□□□ 0.76
COL9A3-202ENST00000452372 LRRC61Q9BV99 259 aa19.82■□□□□ 0.76
COL9A3-202ENST00000452372 FRMD8Q9BZ67 464 aaPredicted RBP19.82■□□□□ 0.76
COL9A3-202ENST00000452372 IL17CQ9P0M4 197 aa19.82■□□□□ 0.76
COL9A3-202ENST00000452372 CNOT6Q9ULM6 557 aaKnown RBP19.82■□□□□ 0.76
COL9A3-202ENST00000452372 FAM149AA5PLN7 773 aa19.81■□□□□ 0.76
COL9A3-202ENST00000452372 TRIM38O00635 465 aa19.81■□□□□ 0.76
COL9A3-202ENST00000452372 PPFIA2O75334 1257 aa19.81■□□□□ 0.76
COL9A3-202ENST00000452372 LDOC1O95751 146 aaPredicted RBP19.81■□□□□ 0.76
COL9A3-202ENST00000452372 RPL22P35268 128 aaKnown RBP19.81■□□□□ 0.76
COL9A3-202ENST00000452372 TAF1AQ15573 450 aaPredicted RBP19.81■□□□□ 0.76
COL9A3-202ENST00000452372 CYP1B1Q16678 543 aa19.81■□□□□ 0.76
COL9A3-202ENST00000452372 DHRS13Q6UX07 377 aa19.81■□□□□ 0.76
COL9A3-202ENST00000452372 GSTA5Q7RTV2 222 aa19.81■□□□□ 0.76
COL9A3-202ENST00000452372 FSTL5Q8N475 847 aaPredicted RBP19.81■□□□□ 0.76
COL9A3-202ENST00000452372 TRAM1L1Q8N609 369 aa19.81■□□□□ 0.76
COL9A3-202ENST00000452372 OR4C6Q8NH72 309 aa19.81■□□□□ 0.76
COL9A3-202ENST00000452372 BRSK1Q8TDC3 778 aa19.81■□□□□ 0.76
COL9A3-202ENST00000452372 PDXPQ96GD0 296 aa19.81■□□□□ 0.76
COL9A3-202ENST00000452372 PLEKHG4BQ96PX9 1271 aa19.81■□□□□ 0.76
COL9A3-202ENST00000452372 ZSCAN5AQ9BUG6 496 aa19.81■□□□□ 0.76
COL9A3-202ENST00000452372 SPATA16Q9BXB7 569 aa19.81■□□□□ 0.76
COL9A3-202ENST00000452372 AP1M1Q9BXS5 423 aa19.81■□□□□ 0.76
COL9A3-202ENST00000452372 CCDC86Q9H6F5 360 aaKnown RBP19.81■□□□□ 0.76
COL9A3-202ENST00000452372 BPIFA1Q9NP55 256 aa19.81■□□□□ 0.76
COL9A3-202ENST00000452372 MRPL40Q9NQ50 206 aaKnown RBP19.81■□□□□ 0.76
COL9A3-202ENST00000452372 NLGN3Q9NZ94 848 aa19.81■□□□□ 0.76
COL9A3-202ENST00000452372 FTSJ1Q9UET6 329 aa19.81■□□□□ 0.76
COL9A3-202ENST00000452372 SLC17A4Q9Y2C5 497 aa19.81■□□□□ 0.76
COL9A3-202ENST00000452372 PRSS38A1L453 326 aa19.8■□□□□ 0.76
COL9A3-202ENST00000452372 TRABD2BA6NFA1 517 aa19.8■□□□□ 0.76
COL9A3-202ENST00000452372 FADS2P1A8MWK0 482 aa19.8■□□□□ 0.76
COL9A3-202ENST00000452372 LMO7DNF2Z398 122 aa19.8■□□□□ 0.76
COL9A3-202ENST00000452372 TPP1O14773 563 aa19.8■□□□□ 0.76
COL9A3-202ENST00000452372 ZNF185O15231 689 aa19.8■□□□□ 0.76
COL9A3-202ENST00000452372 SIGLEC6O43699 453 aa19.8■□□□□ 0.76
COL9A3-202ENST00000452372 FUCA1P04066 466 aa19.8■□□□□ 0.76
COL9A3-202ENST00000452372 ZSCAN5DPP0CG00 497 aa19.8■□□□□ 0.76
COL9A3-202ENST00000452372 ALPPL2P10696 532 aa19.8■□□□□ 0.76
COL9A3-202ENST00000452372 CTSEP14091 401 aa19.8■□□□□ 0.76
COL9A3-202ENST00000452372 C1orf61Q13536 156 aa19.8■□□□□ 0.76
COL9A3-202ENST00000452372 SEMA5AQ13591 1074 aa19.8■□□□□ 0.76
COL9A3-202ENST00000452372 HS1BP3Q53T59 392 aa19.8■□□□□ 0.76
COL9A3-202ENST00000452372 ZDHHC20Q5W0Z9 365 aa19.8■□□□□ 0.76
COL9A3-202ENST00000452372 ALS2CLQ60I27 953 aa19.8■□□□□ 0.76
COL9A3-202ENST00000452372 PDPK2PQ6A1A2 396 aa19.8■□□□□ 0.76
COL9A3-202ENST00000452372 LINC00523Q86TU6 105 aa19.8■□□□□ 0.76
COL9A3-202ENST00000452372 SDR16C5Q8N3Y7 309 aa19.8■□□□□ 0.76
COL9A3-202ENST00000452372 DTX3LQ8TDB6 740 aa19.8■□□□□ 0.76
COL9A3-202ENST00000452372 MAGOHBQ96A72 148 aaKnown RBP19.8■□□□□ 0.76
COL9A3-202ENST00000452372 SCARF2Q96GP6 870 aaPredicted RBP19.8■□□□□ 0.76
COL9A3-202ENST00000452372 CNDP2Q96KP4 475 aaKnown RBP19.8■□□□□ 0.76
COL9A3-202ENST00000452372 NAPGQ99747 312 aaPredicted RBP19.8■□□□□ 0.76
COL9A3-202ENST00000452372 DUSP23Q9BVJ7 150 aa19.8■□□□□ 0.76
COL9A3-202ENST00000452372 CLPBQ9H078 707 aa19.8■□□□□ 0.76
COL9A3-202ENST00000452372 CYP4F12Q9HCS2 524 aa19.8■□□□□ 0.76
COL9A3-202ENST00000452372 RAB6BQ9NRW1 208 aa19.8■□□□□ 0.76
COL9A3-202ENST00000452372 SMARCAL1Q9NZC9 954 aa19.8■□□□□ 0.76
COL9A3-202ENST00000452372 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.8■□□□□ 0.76
COL9A3-202ENST00000452372 DKK4Q9UBT3 224 aa19.8■□□□□ 0.76
COL9A3-202ENST00000452372 MOSPD1Q9UJG1 213 aa19.8■□□□□ 0.76
COL9A3-202ENST00000452372 GPSM3Q9Y4H4 160 aa19.8■□□□□ 0.76
COL9A3-202ENST00000452372 MYLKQ15746 1914 aa19.8■□□□□ 0.76
COL9A3-202ENST00000452372 IGSF10Q6WRI0 2623 aa19.79■□□□□ 0.76
COL9A3-202ENST00000452372 C2orf81A6NN90 581 aa19.79■□□□□ 0.76
COL9A3-202ENST00000452372 INPP4BO15327 924 aa19.79■□□□□ 0.76
COL9A3-202ENST00000452372 STX7O15400 261 aaKnown RBP19.79■□□□□ 0.76
COL9A3-202ENST00000452372 FFAR2O15552 330 aa19.79■□□□□ 0.76
COL9A3-202ENST00000452372 SUN1O94901 812 aa19.79■□□□□ 0.76
COL9A3-202ENST00000452372 CRTAMO95727 393 aa19.79■□□□□ 0.76
COL9A3-202ENST00000452372 HOXB3P14651 431 aaPredicted RBP19.79■□□□□ 0.76
COL9A3-202ENST00000452372 LPOP22079 712 aaPredicted RBP19.79■□□□□ 0.76
COL9A3-202ENST00000452372 POLD2P49005 469 aa19.79■□□□□ 0.76
COL9A3-202ENST00000452372 DNAJC3Q13217 504 aa19.79■□□□□ 0.76
COL9A3-202ENST00000452372 ELOCQ15369 112 aa19.79■□□□□ 0.76
COL9A3-202ENST00000452372 CCDC157Q569K6 752 aa19.79■□□□□ 0.76
COL9A3-202ENST00000452372 GALNT15Q8N3T1 639 aa19.79■□□□□ 0.76
COL9A3-202ENST00000452372 IL26Q9NPH9 171 aa19.79■□□□□ 0.76
COL9A3-202ENST00000452372 TMEM98Q9Y2Y6 226 aa19.79■□□□□ 0.76
COL9A3-202ENST00000452372 PKP3Q9Y446 797 aa19.79■□□□□ 0.76
COL9A3-202ENST00000452372 ARL5AQ9Y689 179 aa19.79■□□□□ 0.76
COL9A3-202ENST00000452372 CTAGE9A4FU28 777 aa19.78■□□□□ 0.76
COL9A3-202ENST00000452372 E7EVH7 732 aa19.78■□□□□ 0.76
COL9A3-202ENST00000452372 YY2O15391 372 aa19.78■□□□□ 0.76
COL9A3-202ENST00000452372 BUD23O43709 281 aaKnown RBP19.78■□□□□ 0.76
COL9A3-202ENST00000452372 IVLP07476 585 aa19.78■□□□□ 0.76
COL9A3-202ENST00000452372 COILP38432 576 aaPredicted RBP19.78■□□□□ 0.76
COL9A3-202ENST00000452372 LMAN1P49257 510 aa19.78■□□□□ 0.76
COL9A3-202ENST00000452372 CLDN6P56747 220 aa19.78■□□□□ 0.76
COL9A3-202ENST00000452372 PDE1BQ01064 536 aa19.78■□□□□ 0.76
COL9A3-202ENST00000452372 PROX2Q3B8N5 592 aa19.78■□□□□ 0.76
COL9A3-202ENST00000452372 TTC27Q6P3X3 843 aa19.78■□□□□ 0.76
COL9A3-202ENST00000452372 DOK6Q6PKX4 331 aa19.78■□□□□ 0.76
COL9A3-202ENST00000452372 LVRNQ6Q4G3 990 aa19.78■□□□□ 0.76
COL9A3-202ENST00000452372 TRIM74Q86UV6 250 aa19.78■□□□□ 0.76
COL9A3-202ENST00000452372 FAM181AQ8N9Y4 354 aa19.78■□□□□ 0.76
COL9A3-202ENST00000452372 C19orf43Q9BQ61 176 aa19.78■□□□□ 0.76
COL9A3-202ENST00000452372 CARS2Q9HA77 564 aaKnown RBP19.78■□□□□ 0.76
COL9A3-202ENST00000452372 VPS18Q9P253 973 aa19.78■□□□□ 0.76
COL9A3-202ENST00000452372 LHX6Q9UPM6 363 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms