RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 PHTF2Q8N3S3 785 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 FAM45AQ8TCE6 357 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 WDR60Q8WVS4 1066 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 SCG3Q8WXD2 468 aaKnown RBP10.68□□□□□ -0.7
PKP4-206ENST00000452162 CHFRQ96EP1 664 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 SGF29Q96ES7 293 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 EXOC2Q96KP1 924 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 DDX50Q9BQ39 737 aaKnown RBP10.68□□□□□ -0.7
PKP4-206ENST00000452162 TDRD1Q9BXT4 1180 aaKnown RBP10.68□□□□□ -0.7
PKP4-206ENST00000452162 TCF7L2Q9NQB0 619 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 VTI1BQ9UEU0 232 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 LSM7Q9UK45 103 aaKnown RBP10.68□□□□□ -0.7
PKP4-206ENST00000452162 CORO1CQ9ULV4 474 aaPredicted RBP10.68□□□□□ -0.7
PKP4-206ENST00000452162 ARIH1Q9Y4X5 557 aaPredicted RBP10.68□□□□□ -0.7
PKP4-206ENST00000452162 NEMP2A6NFY4 417 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 MEI4A8MW99 385 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 E9PBE3 544 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 SLCO1B7G3V0H7 640 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 GFRA2O00451 464 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 SLC9A3R1O14745 358 aaPredicted RBP10.68□□□□□ -0.7
PKP4-206ENST00000452162 KLHL41O60662 606 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 SNUPNO95149 360 aaKnown RBP10.68□□□□□ -0.7
PKP4-206ENST00000452162 LMNAP02545 664 aaKnown RBP10.68□□□□□ -0.7
PKP4-206ENST00000452162 TFEBP19484 476 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 NCF2P19878 526 aaPredicted RBP10.68□□□□□ -0.7
PKP4-206ENST00000452162 CES1P23141 567 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 PRDX6P30041 224 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 SERPINB5P36952 375 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 CCNG1P51959 295 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 ARF5P84085 180 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 TIAL1Q01085 375 aaKnown RBP eCLIP10.68□□□□□ -0.79e-7■■■■□ 22.7
PKP4-206ENST00000452162 NAA25Q14CX7 972 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 ACAP2Q15057 778 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 TYSND1Q2T9J0 566 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 ACSBG2Q5FVE4 666 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 FSCBQ5H9T9 825 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 ZNF318Q5VUA4 2279 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 NAIF1Q69YI7 327 aaPredicted RBP10.68□□□□□ -0.7
PKP4-206ENST00000452162 MRNIPQ6NTE8 343 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 TXNDC11Q6PKC3 985 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 ZNF783Q6ZMS7 281 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 PIM3Q86V86 326 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 POU5F2Q8N7G0 328 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 KDM1BQ8NB78 822 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 FOXQ1Q9C009 403 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 DCLRE1BQ9H816 532 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 SCUBE2Q9NQ36 999 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 NLE1Q9NVX2 485 aaPredicted RBP10.68□□□□□ -0.7
PKP4-206ENST00000452162 TBC1D14Q9P2M4 693 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 C15orf41Q9Y2V0 281 aa10.68□□□□□ -0.7
PKP4-206ENST00000452162 MTF2Q9Y483 593 aaPredicted RBP10.68□□□□□ -0.7
PKP4-206ENST00000452162 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.68□□□□□ -0.7
PKP4-206ENST00000452162 A8MT66 165 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 CBX4O00257 560 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 ZMPSTE24O75844 475 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 CYP17A1P05093 508 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 RBP1P09455 135 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 SCNN1BP51168 640 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 SUOXP51687 545 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 COPAP53621 1224 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 STARD6P59095 220 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 KLF10Q13118 480 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 DHCR24Q15392 516 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 KLC3Q6P597 504 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 SCUBE1Q8IWY4 988 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 ULK2Q8IYT8 1036 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 CCNYL1Q8N7R7 359 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 KIAA1958Q8N8K9 716 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 FLCNQ8NFG4 579 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 OR4L1Q8NH43 312 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 CFAP61Q8NHU2 1237 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 PBXIP1Q96AQ6 731 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 CDKN2AIPNLQ96HQ2 116 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 CNDP1Q96KN2 507 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 MUC3BQ9H195 1237 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 ZNF385DQ9H6B1 395 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 WDR55Q9H6Y2 383 aaPredicted RBP10.67□□□□□ -0.7
PKP4-206ENST00000452162 TBC1D17Q9HA65 648 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 CATSPERZQ9NTU4 200 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 NCKIPSDQ9NZQ3 722 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 CRYL1Q9Y2S2 319 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 ANKRD36A6QL64 1941 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 GOLGA8QA0A0J9YX86 632 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 GOLGA8OA6NCC3 632 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 GOLGA8NF8WBI6 632 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 STK25O00506 426 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 GPR37L1O60883 481 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 NFATC1O95644 943 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 CRTAMO95727 393 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 CTHP32929 405 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 GJA4P35212 333 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 STC1P52823 247 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 MXRA7P84157 204 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 PRKCQQ04759 706 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 TAF1AQ15573 450 aaPredicted RBP10.67□□□□□ -0.7
PKP4-206ENST00000452162 GAB4Q2WGN9 574 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 LSM12Q3MHD2 195 aaKnown RBP10.67□□□□□ -0.7
PKP4-206ENST00000452162 LY6G5CQ5SRR4 150 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 TMEM25Q86YD3 366 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 CPA6Q8N4T0 437 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms