RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 CPNE5Q9HCH3 593 aa12.38□□□□□ -0.43
CPSF4-208ENST00000452047 PKD2L2Q9NZM6 624 aa12.38□□□□□ -0.43
CPSF4-208ENST00000452047 SEPT10Q9P0V9 454 aa12.38□□□□□ -0.43
CPSF4-208ENST00000452047 NFKBIL1Q9UBC1 381 aaPredicted RBP12.38□□□□□ -0.43
CPSF4-208ENST00000452047 ACSL6Q9UKU0 697 aa12.38□□□□□ -0.43
CPSF4-208ENST00000452047 TFR2Q9UP52 801 aa12.38□□□□□ -0.43
CPSF4-208ENST00000452047 PCDHGA7Q9Y5G6 932 aa12.38□□□□□ -0.43
CPSF4-208ENST00000452047 hCG_1818297A0A087WSY0 165 aa12.37□□□□□ -0.43
CPSF4-208ENST00000452047 A0A0A6YYK5 440 aaPredicted RBP12.37□□□□□ -0.43
CPSF4-208ENST00000452047 TEX51A0A1B0GUA7 166 aa12.37□□□□□ -0.43
CPSF4-208ENST00000452047 RHPN2P1A8MT19 583 aa12.37□□□□□ -0.43
CPSF4-208ENST00000452047 PPM1DO15297 605 aa12.37□□□□□ -0.43
CPSF4-208ENST00000452047 CST8O60676 142 aa12.37□□□□□ -0.43
CPSF4-208ENST00000452047 CPNE6O95741 557 aa12.37□□□□□ -0.43
CPSF4-208ENST00000452047 EML2O95834 649 aa12.37□□□□□ -0.43
CPSF4-208ENST00000452047 PIRTP0C851 137 aa12.37□□□□□ -0.43
CPSF4-208ENST00000452047 FECHP22830 423 aa12.37□□□□□ -0.43
CPSF4-208ENST00000452047 CD68P34810 354 aaPredicted RBP12.37□□□□□ -0.43
CPSF4-208ENST00000452047 GPR3P46089 330 aa12.37□□□□□ -0.43
CPSF4-208ENST00000452047 FASLGP48023 281 aa12.37□□□□□ -0.43
CPSF4-208ENST00000452047 MARCKSL1P49006 195 aa12.37□□□□□ -0.43
CPSF4-208ENST00000452047 DCDC1P59894 354 aa12.37□□□□□ -0.43
CPSF4-208ENST00000452047 CDK18Q07002 472 aa12.37□□□□□ -0.43
CPSF4-208ENST00000452047 WASHC5Q12768 1159 aa12.37□□□□□ -0.43
CPSF4-208ENST00000452047 CLN3Q13286 438 aa12.37□□□□□ -0.43
CPSF4-208ENST00000452047 LLGL1Q15334 1064 aa12.37□□□□□ -0.43
CPSF4-208ENST00000452047 PCSK7Q16549 785 aa12.37□□□□□ -0.43
CPSF4-208ENST00000452047 MAP9Q49MG5 647 aa12.37□□□□□ -0.43
CPSF4-208ENST00000452047 TFDP3Q5H9I0 405 aa12.37□□□□□ -0.43
CPSF4-208ENST00000452047 BROXQ5VW32 411 aa12.37□□□□□ -0.43
CPSF4-208ENST00000452047 C11orf63Q6NUN7 778 aa12.37□□□□□ -0.43
CPSF4-208ENST00000452047 KDELC2Q7Z4H8 507 aa12.37□□□□□ -0.43
CPSF4-208ENST00000452047 TMC3Q7Z5M5 1100 aa12.37□□□□□ -0.43
CPSF4-208ENST00000452047 KATNAL2Q8IYT4 538 aa12.37□□□□□ -0.43
CPSF4-208ENST00000452047 SNRNP27Q8WVK2 155 aaKnown RBP12.37□□□□□ -0.43
CPSF4-208ENST00000452047 TFB1MQ8WVM0 346 aaKnown RBP12.37□□□□□ -0.43
CPSF4-208ENST00000452047 TMEM159Q96B96 161 aa12.37□□□□□ -0.43
CPSF4-208ENST00000452047 CCDC97Q96F63 343 aaPredicted RBP12.37□□□□□ -0.43
CPSF4-208ENST00000452047 TEKT5Q96M29 485 aa12.37□□□□□ -0.43
CPSF4-208ENST00000452047 NUDT22Q9BRQ3 303 aa12.37□□□□□ -0.43
CPSF4-208ENST00000452047 SEMA6CQ9H3T2 930 aa12.37□□□□□ -0.43
CPSF4-208ENST00000452047 RDH14Q9HBH5 336 aa12.37□□□□□ -0.43
CPSF4-208ENST00000452047 MAGEE1Q9HCI5 957 aa12.37□□□□□ -0.43
CPSF4-208ENST00000452047 SHOC2Q9UQ13 582 aa12.37□□□□□ -0.43
CPSF4-208ENST00000452047 ZNF711Q9Y462 761 aa12.37□□□□□ -0.43
CPSF4-208ENST00000452047 LOXL2Q9Y4K0 774 aa12.37□□□□□ -0.43
CPSF4-208ENST00000452047 PCDHA13Q9Y5I0 950 aa12.37□□□□□ -0.43
CPSF4-208ENST00000452047 A6NCN8 305 aa12.36□□□□□ -0.43
CPSF4-208ENST00000452047 ATXN7O15265 892 aaPredicted RBP12.36□□□□□ -0.43
CPSF4-208ENST00000452047 ASMTLO95671 621 aa12.36□□□□□ -0.43
CPSF4-208ENST00000452047 NDST3O95803 873 aa12.36□□□□□ -0.43
CPSF4-208ENST00000452047 JMJD7P0C870 316 aa12.36□□□□□ -0.43
CPSF4-208ENST00000452047 ITIH1P19827 911 aa12.36□□□□□ -0.43
CPSF4-208ENST00000452047 CD1CP29017 333 aa12.36□□□□□ -0.43
CPSF4-208ENST00000452047 ALDH4A1P30038 563 aa12.36□□□□□ -0.43
CPSF4-208ENST00000452047 SLC5A2P31639 672 aa12.36□□□□□ -0.43
CPSF4-208ENST00000452047 CSF2RBP32927 897 aa12.36□□□□□ -0.43
CPSF4-208ENST00000452047 C16orf72Q14CZ0 275 aa12.36□□□□□ -0.43
CPSF4-208ENST00000452047 CLPPQ16740 277 aaPredicted RBP12.36□□□□□ -0.43
CPSF4-208ENST00000452047 AMZ1Q400G9 498 aa12.36□□□□□ -0.43
CPSF4-208ENST00000452047 KAZNQ674X7 775 aa12.36□□□□□ -0.43
CPSF4-208ENST00000452047 PCSK4Q6UW60 755 aa12.36□□□□□ -0.43
CPSF4-208ENST00000452047 ZNF574Q6ZN55 896 aaPredicted RBP12.36□□□□□ -0.43
CPSF4-208ENST00000452047 BZW1Q7L1Q6 419 aaKnown RBP12.36□□□□□ -0.43
CPSF4-208ENST00000452047 PIM3Q86V86 326 aa12.36□□□□□ -0.43
CPSF4-208ENST00000452047 SFRP1Q8N474 314 aa12.36□□□□□ -0.43
CPSF4-208ENST00000452047 GPR26Q8NDV2 337 aa12.36□□□□□ -0.43
CPSF4-208ENST00000452047 SLC37A2Q8TED4 501 aa12.36□□□□□ -0.43
CPSF4-208ENST00000452047 KRT35Q92764 455 aa12.36□□□□□ -0.43
CPSF4-208ENST00000452047 RMI1Q9H9A7 625 aa12.36□□□□□ -0.43
CPSF4-208ENST00000452047 PISDQ9UG56 409 aa12.36□□□□□ -0.43
CPSF4-208ENST00000452047 ZNHIT2Q9UHR6 403 aa12.36□□□□□ -0.43
CPSF4-208ENST00000452047 PRKAB1Q9Y478 270 aa12.36□□□□□ -0.43
CPSF4-208ENST00000452047 ADGRG1Q9Y653 693 aa12.36□□□□□ -0.43
CPSF4-208ENST00000452047 IGHV1OR21-1A0A087WYE8 117 aa12.35□□□□□ -0.43
CPSF4-208ENST00000452047 IGHV5-10-1A0A0J9YXX1 117 aa12.35□□□□□ -0.43
CPSF4-208ENST00000452047 RCCD1A6NED2 376 aa12.35□□□□□ -0.43
CPSF4-208ENST00000452047 AURKAO14965 403 aa12.35□□□□□ -0.43
CPSF4-208ENST00000452047 NVLO15381 856 aaKnown RBP12.35□□□□□ -0.43
CPSF4-208ENST00000452047 NUAK1O60285 661 aa12.35□□□□□ -0.43
CPSF4-208ENST00000452047 PMPCBO75439 489 aa12.35□□□□□ -0.43
CPSF4-208ENST00000452047 ZRANB2O95218 330 aaKnown RBP eCLIP12.35□□□□□ -0.43
CPSF4-208ENST00000452047 NFKB1P19838 968 aa12.35□□□□□ -0.43
CPSF4-208ENST00000452047 ETV5P41161 510 aa12.35□□□□□ -0.43
CPSF4-208ENST00000452047 ZNF75DP51815 510 aa12.35□□□□□ -0.43
CPSF4-208ENST00000452047 CFHR1Q03591 330 aa12.35□□□□□ -0.43
CPSF4-208ENST00000452047 SQSTM1Q13501 440 aa12.35□□□□□ -0.43
CPSF4-208ENST00000452047 SPA17Q15506 151 aa12.35□□□□□ -0.43
CPSF4-208ENST00000452047 ZNF569Q5MCW4 686 aa12.35□□□□□ -0.43
CPSF4-208ENST00000452047 PHF19Q5T6S3 580 aa12.35□□□□□ -0.43
CPSF4-208ENST00000452047 ARHGAP40Q5TG30 622 aa12.35□□□□□ -0.43
CPSF4-208ENST00000452047 ALS2CLQ60I27 953 aa12.35□□□□□ -0.43
CPSF4-208ENST00000452047 KDELC1Q6UW63 502 aa12.35□□□□□ -0.43
CPSF4-208ENST00000452047 USP53Q70EK8 1073 aa12.35□□□□□ -0.43
CPSF4-208ENST00000452047 CHST15Q7LFX5 561 aaPredicted RBP12.35□□□□□ -0.43
CPSF4-208ENST00000452047 RCOR2Q8IZ40 523 aa12.35□□□□□ -0.43
CPSF4-208ENST00000452047 P3H4Q92791 437 aa12.35□□□□□ -0.43
CPSF4-208ENST00000452047 MRFAP1L1Q96HT8 127 aa12.35□□□□□ -0.43
CPSF4-208ENST00000452047 PANX2Q96RD6 677 aa12.35□□□□□ -0.43
CPSF4-208ENST00000452047 CMKLR1Q99788 373 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms