RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 PHF19Q5T6S3 580 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 HENMT1Q5T8I9 393 aaKnown RBP9.61□□□□□ -0.87
USP54-207ENST00000451492 CCDC70Q6NSX1 233 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 CRTC3Q6UUV7 619 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 BZW1Q7L1Q6 419 aaKnown RBP9.61□□□□□ -0.87
USP54-207ENST00000451492 PID1Q7Z2X4 250 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 SPRED1Q7Z699 444 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 PDZD3Q86UT5 571 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 JAMLQ86YT9 394 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 RCOR2Q8IZ40 523 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 NRSN1Q8IZ57 195 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 ZNF567Q8N184 647 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 CACTIN-AS1Q8N1I8 211 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 GPR26Q8NDV2 337 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 IPMKQ8NFU5 416 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 OR6C4Q8NGE1 309 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 HTR3CQ8WXA8 447 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 FGF11Q92914 225 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 EID2BQ96D98 161 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 COX14Q96I36 57 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 TEKT5Q96M29 485 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 TRIB3Q96RU7 358 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 LYSMD1Q96S90 227 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 OSGEPL1Q9H4B0 414 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 FAM83DQ9H4H8 585 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 RDH14Q9HBH5 336 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 TRNAU1APQ9NX07 287 aaKnown RBP9.61□□□□□ -0.87
USP54-207ENST00000451492 RPL26L1Q9UNX3 145 aaKnown RBP9.61□□□□□ -0.87
USP54-207ENST00000451492 KCNK6Q9Y257 313 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 SPO11Q9Y5K1 396 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 APC2O95996 2303 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 A0A087WV48 116 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 CCDC187A0A096LP49 1063 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 GRID2IPA4D2P6 1211 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 SNX2O60749 519 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 TNFSF15O95150 251 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 NDST3O95803 873 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 FTCDO95954 541 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 PYGLP06737 847 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 HOXB3P14651 431 aaPredicted RBP9.6□□□□□ -0.87
USP54-207ENST00000451492 ITIH1P19827 911 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 MAPK9P45984 424 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 WNT3AP56704 352 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 OLIG2Q13516 323 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 SEPT7Q16181 437 aaKnown RBP9.6□□□□□ -0.87
USP54-207ENST00000451492 PPP2R5EQ16537 467 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 TAZQ16635 292 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 PYCR3Q53H96 274 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 NKAIN2Q5VXU1 208 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 BBS12Q6ZW61 710 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 TMPRSS9Q7Z410 1059 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 GLT6D1Q7Z4J2 308 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 TMEM139Q8IV31 216 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 NAGSQ8N159 534 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 ARL14Q8N4G2 192 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 WDR36Q8NI36 951 aaKnown RBP9.6□□□□□ -0.87
USP54-207ENST00000451492 SNIP1Q8TAD8 396 aaKnown RBP9.6□□□□□ -0.87
USP54-207ENST00000451492 WDR48Q8TAF3 677 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 GDAP1Q8TB36 358 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 ACTL9Q8TC94 416 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 BLOC1S5Q8TDH9 187 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 KCNE4Q8WWG9 221 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 OXNAD1Q96HP4 312 aaPredicted RBP9.6□□□□□ -0.87
USP54-207ENST00000451492 FICDQ9BVA6 458 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 FSD1LQ9BXM9 530 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 OR2AG1Q9H205 316 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 ASCL3Q9NQ33 180 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 THSD1Q9NS62 852 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 PISDQ9UG56 409 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 FAM153AQ9UHL3 310 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 ACACAQ13085 2346 aa9.6□□□□□ -0.87
USP54-207ENST00000451492 URB1O60287 2271 aaKnown RBP9.59□□□□□ -0.87
USP54-207ENST00000451492 CHD6Q8TD26 2715 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 CCDC66A2RUB6 948 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 APOC4-APOC2K7ER74 178 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 KCNN4O15554 427 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 PJA2O43164 708 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 GPR39O43194 453 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 KLK10O43240 276 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 NUDT21O43809 227 aaKnown RBP9.59□□□□□ -0.87
USP54-207ENST00000451492 DNAJC6O75061 913 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 SLC25A14O95258 325 aaPredicted RBP9.59□□□□□ -0.87
USP54-207ENST00000451492 EML2O95834 649 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 APOC2P02655 101 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 JMJD7P0C870 316 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 ZNF8P17098 575 aaPredicted RBP9.59□□□□□ -0.87
USP54-207ENST00000451492 BPIP17213 487 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 FECHP22830 423 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 MPSTP25325 297 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 PSMB4P28070 264 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 UGT1A5P35504 534 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 LSSP48449 732 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 MAPK10P53779 464 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 RWDD2BP57060 319 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 EIF3EP60228 445 aaKnown RBP9.59□□□□□ -0.87
USP54-207ENST00000451492 CXADRP78310 365 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 INSCQ1MX18 579 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 SIRPB2Q5JXA9 342 aa9.59□□□□□ -0.87
USP54-207ENST00000451492 DARS2Q6PI48 645 aaKnown RBP9.59□□□□□ -0.87
USP54-207ENST00000451492 OGFOD3Q6PK18 319 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms