RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 OTUD6BQ8N6M0 293 aa13.96□□□□□ -0.17
SHMT2-203ENST00000449049 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.96□□□□□ -0.17
SHMT2-203ENST00000449049 SPACA7Q96KW9 195 aa13.96□□□□□ -0.17
SHMT2-203ENST00000449049 LENG8Q96PV6 779 aaPredicted RBP13.96□□□□□ -0.17
SHMT2-203ENST00000449049 VPS35Q96QK1 796 aa13.96□□□□□ -0.17
SHMT2-203ENST00000449049 CPNE1Q99829 537 aa13.96□□□□□ -0.17
SHMT2-203ENST00000449049 MCMBPQ9BTE3 642 aa13.96□□□□□ -0.17
SHMT2-203ENST00000449049 GPR174Q9BXC1 333 aa13.96□□□□□ -0.17
SHMT2-203ENST00000449049 C1QTNF7Q9BXJ2 289 aa13.96□□□□□ -0.17
SHMT2-203ENST00000449049 ROPN1BQ9BZX4 212 aaPredicted RBP13.96□□□□□ -0.17
SHMT2-203ENST00000449049 PCED1AQ9H1Q7 454 aa13.96□□□□□ -0.17
SHMT2-203ENST00000449049 FAM96AQ9H5X1 160 aa13.96□□□□□ -0.17
SHMT2-203ENST00000449049 ROPN1Q9HAT0 212 aaPredicted RBP13.96□□□□□ -0.17
SHMT2-203ENST00000449049 SLC24A2Q9UI40 661 aa13.96□□□□□ -0.17
SHMT2-203ENST00000449049 MBD1Q9UIS9 605 aaPredicted RBP13.96□□□□□ -0.17
SHMT2-203ENST00000449049 PSAT1Q9Y617 370 aa13.96□□□□□ -0.17
SHMT2-203ENST00000449049 POC1B-GALNT4F8VUJ3 575 aa13.96□□□□□ -0.18
SHMT2-203ENST00000449049 UGT1A9O60656 530 aa13.96□□□□□ -0.18
SHMT2-203ENST00000449049 SASH3O75995 380 aa13.96□□□□□ -0.18
SHMT2-203ENST00000449049 PAK4O96013 591 aaPredicted RBP13.96□□□□□ -0.18
SHMT2-203ENST00000449049 IGHV4-34P06331 123 aa13.96□□□□□ -0.18
SHMT2-203ENST00000449049 PYGLP06737 847 aa13.96□□□□□ -0.18
SHMT2-203ENST00000449049 UGT1A6P19224 532 aa13.96□□□□□ -0.18
SHMT2-203ENST00000449049 UGT1A1P22309 533 aa13.96□□□□□ -0.18
SHMT2-203ENST00000449049 UGT1A4P22310 534 aa13.96□□□□□ -0.18
SHMT2-203ENST00000449049 MAT2AP31153 395 aaKnown RBP13.96□□□□□ -0.18
SHMT2-203ENST00000449049 UGT1A3P35503 534 aa13.96□□□□□ -0.18
SHMT2-203ENST00000449049 UGT1A5P35504 534 aa13.96□□□□□ -0.18
SHMT2-203ENST00000449049 IFFO1Q0D2I5 559 aa13.96□□□□□ -0.18
SHMT2-203ENST00000449049 LRRC14Q15048 493 aa13.96□□□□□ -0.18
SHMT2-203ENST00000449049 USP39Q53GS9 565 aaKnown RBP13.96□□□□□ -0.18
SHMT2-203ENST00000449049 SETMARQ53H47 684 aaPredicted RBP13.96□□□□□ -0.18
SHMT2-203ENST00000449049 LYPLAL1Q5VWZ2 237 aa13.96□□□□□ -0.18
SHMT2-203ENST00000449049 SDCCAG8Q86SQ7 713 aaPredicted RBP13.96□□□□□ -0.18
SHMT2-203ENST00000449049 LDB1Q86U70 411 aaPredicted RBP13.96□□□□□ -0.18
SHMT2-203ENST00000449049 WDR5BQ86VZ2 330 aa13.96□□□□□ -0.18
SHMT2-203ENST00000449049 PELI3Q8N2H9 469 aa13.96□□□□□ -0.18
SHMT2-203ENST00000449049 DCAKDQ8WVC6 231 aa13.96□□□□□ -0.18
SHMT2-203ENST00000449049 KLK6Q92876 244 aa13.96□□□□□ -0.18
SHMT2-203ENST00000449049 CENPTQ96BT3 561 aa13.96□□□□□ -0.18
SHMT2-203ENST00000449049 ULK4Q96C45 1275 aa13.96□□□□□ -0.18
SHMT2-203ENST00000449049 TCF12Q99081 682 aa13.96□□□□□ -0.18
SHMT2-203ENST00000449049 KLF6Q99612 283 aaPredicted RBP13.96□□□□□ -0.18
SHMT2-203ENST00000449049 UGT1A7Q9HAW7 530 aa13.96□□□□□ -0.18
SHMT2-203ENST00000449049 UGT1A10Q9HAW8 530 aa13.96□□□□□ -0.18
SHMT2-203ENST00000449049 UGT1A8Q9HAW9 530 aa13.96□□□□□ -0.18
SHMT2-203ENST00000449049 INTS10Q9NVR2 710 aaKnown RBP13.96□□□□□ -0.18
SHMT2-203ENST00000449049 CRLS1Q9UJA2 301 aa13.96□□□□□ -0.18
SHMT2-203ENST00000449049 ZNF180Q9UJW8 692 aa13.96□□□□□ -0.18
SHMT2-203ENST00000449049 FBXO4Q9UKT5 387 aa13.96□□□□□ -0.18
SHMT2-203ENST00000449049 TMPRSS11EQ9UL52 423 aa13.96□□□□□ -0.18
SHMT2-203ENST00000449049 KMT2EQ8IZD2 1858 aa13.95□□□□□ -0.18
SHMT2-203ENST00000449049 BPTFQ12830 3046 aa13.95□□□□□ -0.18
SHMT2-203ENST00000449049 S1PR4O95977 384 aa13.95□□□□□ -0.18
SHMT2-203ENST00000449049 ACRV1P26436 265 aa13.95□□□□□ -0.18
SHMT2-203ENST00000449049 TEAD1P28347 426 aa13.95□□□□□ -0.18
SHMT2-203ENST00000449049 GABRB3P28472 473 aa13.95□□□□□ -0.18
SHMT2-203ENST00000449049 GP5P40197 560 aa13.95□□□□□ -0.18
SHMT2-203ENST00000449049 LEPRP48357 1165 aaKnown RBP13.95□□□□□ -0.18
SHMT2-203ENST00000449049 TTPAP49638 278 aa13.95□□□□□ -0.18
SHMT2-203ENST00000449049 CSE1LP55060 971 aaKnown RBP13.95□□□□□ -0.18
SHMT2-203ENST00000449049 MPP1Q00013 466 aa13.95□□□□□ -0.18
SHMT2-203ENST00000449049 RASA2Q15283 850 aa13.95□□□□□ -0.18
SHMT2-203ENST00000449049 IRF4Q15306 451 aa13.95□□□□□ -0.18
SHMT2-203ENST00000449049 PNCKQ6P2M8 343 aa13.95□□□□□ -0.18
SHMT2-203ENST00000449049 PACS1Q6VY07 963 aa13.95□□□□□ -0.18
SHMT2-203ENST00000449049 STRA8Q7Z7C7 330 aa13.95□□□□□ -0.18
SHMT2-203ENST00000449049 TDRPQ86YL5 185 aa13.95□□□□□ -0.18
SHMT2-203ENST00000449049 NXPE1Q8N323 547 aa13.95□□□□□ -0.18
SHMT2-203ENST00000449049 DENND6BQ8NEG7 585 aa13.95□□□□□ -0.18
SHMT2-203ENST00000449049 EPS8L3Q8TE67 593 aaKnown RBP13.95□□□□□ -0.18
SHMT2-203ENST00000449049 MBNL1Q9NR56 388 aaKnown RBP13.95□□□□□ -0.18
SHMT2-203ENST00000449049 EURLQ9NYK6 297 aa13.95□□□□□ -0.18
SHMT2-203ENST00000449049 VCANP13611 3396 aa13.95□□□□□ -0.18
SHMT2-203ENST00000449049 K7ESM1 405 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 RAD51BO15315 384 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 AHSGP02765 367 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 AVPR2P30518 371 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 MSH2P43246 934 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 FNTBP49356 437 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 DBN1Q16643 649 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 RNF187Q5TA31 235 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-203ENST00000449049 RAET1GQ6H3X3 334 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 ADGRD1Q6QNK2 874 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 SLC36A4Q6YBV0 504 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 TAS2R42Q7RTR8 314 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 LONP2Q86WA8 852 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 SERPINA9Q86WD7 417 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 PNPLA1Q8N8W4 532 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 PLA2G15Q8NCC3 412 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 CADM4Q8NFZ8 388 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 BTN2A2Q8WVV5 523 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 FBXO6Q9NRD1 293 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-203ENST00000449049 TXNDC16Q9P2K2 825 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 IGLV3-16A0A075B6K0 115 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 RASGRF2O14827 1237 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 ATP8B1O43520 1251 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 NDUFS2O75306 463 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 FAM155BO75949 473 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 PCCBP05166 539 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms