RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 HS6ST3Q8IZP7 471 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 C19orf60Q96EN9 201 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 TEX37Q96LM6 180 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 ATOH8Q96SQ7 321 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 MAGEH1Q9H213 219 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 ELAC1Q9H777 363 aaKnown RBP14.73□□□□□ -0.05
SF1-211ENST00000448404 RNF112Q9ULX5 631 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 ATP11BQ9Y2G3 1177 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 PCDHGA7Q9Y5G6 932 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 SPTBN5Q9NRC6 3674 aaKnown RBP14.73□□□□□ -0.05
SF1-211ENST00000448404 PRORSD1PA6NEY8 169 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 ANKRD66B4E2M5 251 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 UGT1A6P19224 532 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 UGT1A1P22309 533 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 UGT1A4P22310 534 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 PAX3P23760 479 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 UGT1A3P35503 534 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 UGT1A5P35504 534 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 PIK3CGP48736 1102 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 HK3P52790 923 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 HERVK_113P63132 956 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 SLC14A2Q15849 920 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 CTSL3PQ5NE16 218 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 REP15Q6BDI9 236 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 CPSF7Q8N684 471 aaKnown RBP14.73□□□□□ -0.05
SF1-211ENST00000448404 ZNF461Q8TAF7 563 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 ADAMTS19Q8TE59 1207 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 PKP2Q99959 881 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 TTLL2Q9BWV7 592 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 ERVK-6Q9BXR3 956 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 STK39Q9UEW8 545 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 EVLQ9UI08 416 aaPredicted RBP14.73□□□□□ -0.05
SF1-211ENST00000448404 ZNF225Q9UK10 706 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 NELFEP18615 380 aaKnown RBP14.73□□□□□ -0.05
SF1-211ENST00000448404 ALDH1A3P47895 512 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 PSME3P61289 254 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 ARMC12Q5T9G4 340 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 RFLNAQ6ZTI6 216 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 TWIST2Q8WVJ9 160 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 VPS33AQ96AX1 596 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 ZFRQ96KR1 1074 aaKnown RBP14.73□□□□□ -0.05
SF1-211ENST00000448404 EFCAB1Q9HAE3 211 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 MEAF6Q9HAF1 191 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 CACNA2D2Q9NY47 1150 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 CPQQ9Y646 472 aa14.73□□□□□ -0.05
SF1-211ENST00000448404 PRUNE2Q8WUY3 3088 aa14.72□□□□□ -0.05
SF1-211ENST00000448404 ACVR1Q04771 509 aa14.72□□□□□ -0.05
SF1-211ENST00000448404 OR52B6Q8NGF0 335 aa14.72□□□□□ -0.05
SF1-211ENST00000448404 TUBGCP3Q96CW5 907 aa14.72□□□□□ -0.05
SF1-211ENST00000448404 ANKRD27Q96NW4 1050 aa14.72□□□□□ -0.05
SF1-211ENST00000448404 EIF2B4Q9UI10 523 aaKnown RBP14.72□□□□□ -0.05
SF1-211ENST00000448404 VPS51Q9UID3 782 aa14.72□□□□□ -0.05
SF1-211ENST00000448404 ANKRD36A6QL64 1941 aa14.72□□□□□ -0.05
SF1-211ENST00000448404 VCANP13611 3396 aa14.72□□□□□ -0.05
SF1-211ENST00000448404 A0A1B0GVM2 712 aa14.72□□□□□ -0.05
SF1-211ENST00000448404 TRPC5OSA6NMA1 111 aa14.72□□□□□ -0.05
SF1-211ENST00000448404 STX7O15400 261 aaKnown RBP14.72□□□□□ -0.05
SF1-211ENST00000448404 FKBP6O75344 327 aa14.72□□□□□ -0.05
SF1-211ENST00000448404 CLDN11O75508 207 aa14.72□□□□□ -0.05
SF1-211ENST00000448404 GUCA1CO95843 209 aa14.72□□□□□ -0.05
SF1-211ENST00000448404 CASP2P42575 452 aa14.72□□□□□ -0.05
SF1-211ENST00000448404 CTSOP43234 321 aaPredicted RBP14.72□□□□□ -0.05
SF1-211ENST00000448404 STK19P49842 368 aaPredicted RBP14.72□□□□□ -0.05
SF1-211ENST00000448404 RHOAP61586 193 aa14.72□□□□□ -0.05
SF1-211ENST00000448404 IL23RQ5VWK5 629 aa14.72□□□□□ -0.05
SF1-211ENST00000448404 LARP4Q71RC2 724 aaKnown RBP eCLIP14.72□□□□□ -0.051e-6■■■■□ 24.9
SF1-211ENST00000448404 LKAAEAR1Q8TD35 194 aa14.72□□□□□ -0.05
SF1-211ENST00000448404 LINGO1Q96FE5 620 aa14.72□□□□□ -0.05
SF1-211ENST00000448404 FEM1AQ9BSK4 669 aa14.72□□□□□ -0.05
SF1-211ENST00000448404 CCDC28BQ9BUN5 200 aa14.72□□□□□ -0.05
SF1-211ENST00000448404 KLF16Q9BXK1 252 aaPredicted RBP14.72□□□□□ -0.05
SF1-211ENST00000448404 CCDC68Q9H2F9 335 aa14.72□□□□□ -0.05
SF1-211ENST00000448404 NLE1Q9NVX2 485 aaPredicted RBP14.72□□□□□ -0.05
SF1-211ENST00000448404 EGFL7Q9UHF1 273 aa14.72□□□□□ -0.05
SF1-211ENST00000448404 USP22Q9UPT9 525 aa14.72□□□□□ -0.05
SF1-211ENST00000448404 A0A1B0GTW7 788 aa14.71□□□□□ -0.05
SF1-211ENST00000448404 TUFMP49411 452 aaKnown RBP14.71□□□□□ -0.05
SF1-211ENST00000448404 KPNA2P52292 529 aaKnown RBP14.71□□□□□ -0.05
SF1-211ENST00000448404 SLC44A4Q53GD3 710 aa14.71□□□□□ -0.05
SF1-211ENST00000448404 C16orf89Q6UX73 402 aa14.71□□□□□ -0.05
SF1-211ENST00000448404 PDSS2Q86YH6 399 aa14.71□□□□□ -0.05
SF1-211ENST00000448404 FUBP1Q96AE4 644 aaKnown RBP14.71□□□□□ -0.05
SF1-211ENST00000448404 PPP1R2P1Q96PQ5 205 aa14.71□□□□□ -0.05
SF1-211ENST00000448404 PLEKHG4BQ96PX9 1271 aa14.71□□□□□ -0.05
SF1-211ENST00000448404 SLAMF8Q9P0V8 285 aa14.71□□□□□ -0.05
SF1-211ENST00000448404 FNIP2Q9P278 1114 aa14.71□□□□□ -0.05
SF1-211ENST00000448404 KATNA1O75449 491 aa14.71□□□□□ -0.06
SF1-211ENST00000448404 RNASEH2AO75792 299 aaKnown RBP14.71□□□□□ -0.06
SF1-211ENST00000448404 LYNP07948 512 aa14.71□□□□□ -0.06
SF1-211ENST00000448404 SLC7A2P52569 658 aa14.71□□□□□ -0.06
SF1-211ENST00000448404 ELAVL2Q12926 359 aaKnown RBP14.71□□□□□ -0.06
SF1-211ENST00000448404 NRF1Q16656 503 aa14.71□□□□□ -0.06
SF1-211ENST00000448404 AMIGO2Q86SJ2 522 aa14.71□□□□□ -0.06
SF1-211ENST00000448404 PGAM4Q8N0Y7 254 aa14.71□□□□□ -0.06
SF1-211ENST00000448404 FBXO39Q8N4B4 442 aa14.71□□□□□ -0.06
SF1-211ENST00000448404 GATA6Q92908 595 aa14.71□□□□□ -0.06
SF1-211ENST00000448404 ERLEC1Q96DZ1 483 aa14.71□□□□□ -0.06
SF1-211ENST00000448404 MRPL1Q9BYD6 325 aaKnown RBP14.71□□□□□ -0.06
SF1-211ENST00000448404 EML4Q9HC35 981 aaKnown RBP14.71□□□□□ -0.06
SF1-211ENST00000448404 LHX3Q9UBR4 397 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms