RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 TTC38Q5R3I4 469 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 UBAP2Q5T6F2 1119 aaKnown RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 TEDDM1Q5T9Z0 273 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 KRT79Q5XKE5 535 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 FCRLBQ6BAA4 426 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 IL31Q6EBC2 164 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 GTF2IRD2BQ6EKJ0 949 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 CNNM4Q6P4Q7 775 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 ZDHHC24Q6UX98 284 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 RASSF6Q6ZTQ3 369 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 LYSMD3Q7Z3D4 306 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 PIWIL3Q7Z3Z3 882 aaKnown RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 BNIPLQ7Z465 357 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 GTF2IRD2Q86UP8 949 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 NOXA1Q86UR1 476 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 RAB43Q86YS6 212 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 MIB1Q86YT6 1006 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 EID3Q8N140 333 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 METTL4Q8N3J2 472 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 FIBCD1Q8N539 461 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 FNDC5Q8NAU1 212 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 BHLHE22Q8NFJ8 381 aaPredicted RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 GPR156Q8NFN8 814 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 SLC7A14Q8TBB6 771 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 GRIN3AQ8TCU5 1115 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 FAR1Q8WVX9 515 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 NKD2Q969F2 451 aaPredicted RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 EAF2Q96CJ1 260 aaPredicted RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 HDAC11Q96DB2 347 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 SLC47A1Q96FL8 570 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 OPALINQ96PE5 141 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 IL12RB2Q99665 862 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 APOL4Q9BPW4 351 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 OCSTAMPQ9BR26 566 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 TRAF4Q9BUZ4 470 aaPredicted RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 KIFC3Q9BVG8 833 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 NIFKQ9BYG3 293 aaKnown RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 NUAK2Q9H093 628 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 EPB41L4BQ9H329 900 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 DHX33Q9H6R0 707 aaKnown RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 KCNK13Q9HB14 408 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 IMPAD1Q9NX62 359 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 SIRT5Q9NXA8 310 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 KCNK4Q9NYG8 393 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 RDH8Q9NYR8 311 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 COPZ2Q9P299 210 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 NXF1Q9UBU9 619 aaKnown RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 IPO11Q9UI26 975 aaKnown RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 ENPP5Q9UJA9 477 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 COPS3Q9UNS2 423 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 PCDHGA2Q9Y5H1 932 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 ACTL7AQ9Y615 435 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 MED23Q9ULK4 1368 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 DOCK3Q8IZD9 2030 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 UBE4BO95155 1302 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 CYP3A7-CYP3A51PA0A087WV96 503 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 LACTBL1A8MY62 500 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 LINC00587B1AMM8 73 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 LINC01387J3KSC0 135 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 WWP2O00308 870 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 EPHB6O15197 1021 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 LINC01565O15544 149 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 DFNA5O60443 496 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 BRINP1O60477 761 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 TPST1O60507 370 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 ATG13O75143 517 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 ZMPSTE24O75844 475 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 CCNE2O96020 404 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 GNRH1P01148 92 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 MMP1P03956 469 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 NFICP08651 508 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 DLATP10515 647 aaKnown RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 APEHP13798 732 aaKnown RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 EDN3P14138 238 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 JUPP14923 745 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 CYP3A7P24462 503 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 ALDH4A1P30038 563 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 PBLDP30039 288 aaPredicted RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 ETV5P41161 510 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 MAPK8P45983 427 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 PRMT2P55345 433 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 OSTNP61366 133 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 FOXO4P98177 505 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 CHAF1BQ13112 559 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 RFTN1Q14699 578 aaPredicted RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 TMEM132BQ14DG7 1078 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 ZNF568Q3ZCX4 644 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 PLEKHG4Q58EX7 1191 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 ANKS6Q68DC2 871 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 CES5AQ6NT32 575 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 ABRAXAS1Q6UWZ7 409 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 C16orf89Q6UX73 402 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 MACC1Q6ZN28 852 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 BTLAQ7Z6A9 289 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 PTAR1Q7Z6K3 402 aaPredicted RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 ADGRA1Q86SQ6 560 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 JAZF1Q86VZ6 243 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 TIGD4Q8IY51 512 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 TBC1D21Q8IYX1 336 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms