RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 NPIPB15A6NHN6 443 aaPredicted RBP7.73□□□□□ -1.17
CD44-211ENST00000442151 KIR2DS3K7RE56 304 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 FZD6O60353 706 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 CELA2BP08218 269 aaPredicted RBP7.73□□□□□ -1.17
CD44-211ENST00000442151 CTPS1P17812 591 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 VCLP18206 1134 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 KDELR1P24390 212 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 ACTR1BP42025 376 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 LIMK2P53671 638 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 MAPK10P53779 464 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 ACTR1AP61163 376 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 CTBSQ01459 385 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 PTSQ03393 145 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 CLN3Q13286 438 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 KIR2DS5Q14953 304 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 LRRC66Q68CR7 880 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 TMEM71Q6P5X7 295 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 LYSMD3Q7Z3D4 306 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 PGBD5Q8N414 524 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 BRSK1Q8TDC3 778 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 FAF2Q96CS3 445 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 RNF157Q96PX1 679 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 LGR4Q9BXB1 951 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 CARD9Q9H257 536 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 TRIT1Q9H3H1 467 aaKnown RBP7.73□□□□□ -1.17
CD44-211ENST00000442151 SPATS2LQ9NUQ6 558 aaKnown RBP7.73□□□□□ -1.17
CD44-211ENST00000442151 ETNK2Q9NVF9 386 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 ZNHIT2Q9UHR6 403 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 PNMA8BQ9ULN7 279 aaPredicted RBP7.73□□□□□ -1.17
CD44-211ENST00000442151 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.73□□□□□ -1.17
CD44-211ENST00000442151 PCDHGA3Q9Y5H0 932 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 HEMK1Q9Y5R4 338 aaPredicted RBP7.73□□□□□ -1.17
CD44-211ENST00000442151 SHROOM3Q8TF72 1996 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 ANKRD66B4E2M5 251 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.72□□□□□ -1.17
CD44-211ENST00000442151 STMND1H3BQB6 276 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 APOL1O14791 398 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 B4GAT1O43505 415 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 DUX1O43812 170 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 ECEL1O95672 775 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 JCHAINP01591 159 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 IL4RP24394 825 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 CASP14P31944 242 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 GJC1P36383 396 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 CETN2P41208 172 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 FASLGP48023 281 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 SPINT3P49223 89 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 ARSEP51690 589 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 CLCNKAP51800 687 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 EPHA4P54764 986 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 OR1D5P58170 312 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 MC1RQ01726 317 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 MESDQ14696 234 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 AMZ1Q400G9 498 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 PYCR3Q53H96 274 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 DCAF12Q5T6F0 453 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 E4F1Q66K89 784 aaPredicted RBP7.72□□□□□ -1.17
CD44-211ENST00000442151 NCBP2-AS2Q69YL0 99 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 SLC30A9Q6PML9 568 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 NT5DC3Q86UY8 548 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 CNGA4Q8IV77 575 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 RHOT1Q8IXI2 618 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 LPCAT1Q8NF37 534 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 USP7Q93009 1102 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 BTBD6Q96KE9 485 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 CATSPER2Q96P56 530 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 ZSCAN5AQ9BUG6 496 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 DDA1Q9BW61 102 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 TDRD1Q9BXT4 1180 aaKnown RBP7.72□□□□□ -1.17
CD44-211ENST00000442151 FAM117AQ9C073 453 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 TRABDQ9H4I3 376 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 ZFYVE1Q9HBF4 777 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 CPNE5Q9HCH3 593 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 MAGEE1Q9HCI5 957 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 CHKBQ9Y259 395 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 AKAP13Q12802 2813 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 CELSR3Q9NYQ7 3312 aa7.72□□□□□ -1.17
CD44-211ENST00000442151 SMG1Q96Q15 3661 aaKnown RBP7.72□□□□□ -1.17
CD44-211ENST00000442151 C1orf232A0A0U1RR37 186 aa7.71□□□□□ -1.17
CD44-211ENST00000442151 B4E171 279 aa7.71□□□□□ -1.17
CD44-211ENST00000442151 VEGFDO43915 354 aa7.71□□□□□ -1.17
CD44-211ENST00000442151 GM2AP17900 193 aa7.71□□□□□ -1.17
CD44-211ENST00000442151 MAP4P27816 1152 aaKnown RBP7.71□□□□□ -1.17
CD44-211ENST00000442151 TSPAN7P41732 249 aa7.71□□□□□ -1.17
CD44-211ENST00000442151 IFI35P80217 286 aaPredicted RBP7.71□□□□□ -1.17
CD44-211ENST00000442151 PPIDQ08752 370 aaKnown RBP7.71□□□□□ -1.17
CD44-211ENST00000442151 AP1B1Q10567 949 aa7.71□□□□□ -1.17
CD44-211ENST00000442151 GTF2H3Q13889 308 aa7.71□□□□□ -1.17
CD44-211ENST00000442151 TCEA2Q15560 299 aa7.71□□□□□ -1.17
CD44-211ENST00000442151 DOK6Q6PKX4 331 aa7.71□□□□□ -1.17
CD44-211ENST00000442151 WDR74Q6RFH5 385 aaPredicted RBP7.71□□□□□ -1.17
CD44-211ENST00000442151 CEACAM20Q6UY09 585 aa7.71□□□□□ -1.17
CD44-211ENST00000442151 PLXDC1Q8IUK5 500 aa7.71□□□□□ -1.17
CD44-211ENST00000442151 PHYKPLQ8IUZ5 450 aa7.71□□□□□ -1.17
CD44-211ENST00000442151 SLITRK4Q8IW52 837 aa7.71□□□□□ -1.17
CD44-211ENST00000442151 RBM12BQ8IXT5 1001 aaKnown RBP7.71□□□□□ -1.17
CD44-211ENST00000442151 KIAA1143Q96AT1 154 aaPredicted RBP7.71□□□□□ -1.17
CD44-211ENST00000442151 CRELD1Q96HD1 420 aa7.71□□□□□ -1.17
CD44-211ENST00000442151 COX14Q96I36 57 aa7.71□□□□□ -1.17
CD44-211ENST00000442151 BBC3Q96PG8 261 aaPredicted RBP7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms