RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 SBK3P0C264 359 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 ZDHHC11BP0C7U3 371 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 HOXD9P28356 352 aaPredicted RBP7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 ACVRL1P37023 503 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 SCNN1AP37088 669 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 VHLP40337 213 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 BLKP51451 505 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 ARFIP2P53365 341 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 TAF11Q15544 211 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 LRRC74BQ6ZQY2 392 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 TAF8Q7Z7C8 310 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 APLFQ8IW19 511 aaPredicted RBP7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 PDIK1LQ8N165 341 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 RTL3Q8N8U3 475 aaKnown RBP7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 OR2AP1Q8NGE2 309 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 STON2Q8WXE9 905 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 SEMA3CQ99985 751 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 TUBB6Q9BUF5 446 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 GAREM1Q9H706 876 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 SGK2Q9HBY8 427 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 GPAMQ9HCL2 828 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 ARMCX1Q9P291 453 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 THAP10Q9P2Z0 257 aaPredicted RBP7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 SLC30A1Q9Y6M5 507 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 TDRD15B5MCY1 1934 aaKnown RBP7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 GBF1Q92538 1859 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 IQANK1A0A1B0GTG1 560 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 OTOL1A6NHN0 477 aaPredicted RBP7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 TRIM49D1C9J1S8 452 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 HAUS5O94927 633 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 RASGRP1O95267 797 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 SERPINA6P08185 405 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 ITPKAP23677 461 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 SLC6A4P31645 630 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 RASSF2P50749 326 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 AIF1P55008 147 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 SEMG2Q02383 582 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 CCNIQ14094 377 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 COL19A1Q14993 1142 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 CAPRIN2Q6IMN6 1127 aaKnown RBP7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 DPY19L3Q6ZPD9 716 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 ERN2Q76MJ5 926 aaKnown RBP7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 TICAM1Q8IUC6 712 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 UNC5BQ8IZJ1 945 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 BLOC1S5Q8TDH9 187 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 DNAJC9Q8WXX5 260 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 HMCESQ96FZ2 354 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 PAIP2Q9BPZ3 127 aaKnown RBP7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 OSBPL1AQ9BXW6 950 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 CEP41Q9BYV8 373 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 PAK5Q9P286 719 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 PKP3Q9Y446 797 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 GPSM3Q9Y4H4 160 aa7.37□□□□□ -1.23
CDC42BPA-208ENST00000442054 WDR91A4D1P6 747 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 CASQ2O14958 399 aaPredicted RBP7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 TMCC1O94876 653 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 PMLP29590 882 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 ALDH3A1P30838 453 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 PAPOLAP51003 745 aaKnown RBP7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 PDE1BQ01064 536 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 RCN1Q15293 331 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 BBS9Q3SYG4 887 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 CWF19L1Q69YN2 538 aaKnown RBP7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 PKN3Q6P5Z2 889 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 IL27RAQ6UWB1 636 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 GDPD4Q6W3E5 623 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 CDKL3Q8IVW4 592 aaPredicted RBP7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 ZFAND2BQ8WV99 257 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 SPDL1Q96EA4 605 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 MRGPRX1Q96LB2 322 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 PHPT1Q9NRX4 125 aaPredicted RBP7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 UBP1Q9NZI7 540 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 TXNDC16Q9P2K2 825 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 APOBEC2Q9Y235 224 aaKnown RBP7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 LRCH1Q9Y2L9 728 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 A0A0C4DFX4 3053 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 CACNA1BQ00975 2339 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 NUMA1Q14980 2115 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 A0A1B0GVT2 93 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 CFAP69A5D8W1 941 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 CFAP99D6REC4 459 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 PLK4O00444 970 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 MTSS1O43312 755 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 AP1G1O43747 822 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 SDC3O75056 442 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 LEFTY1O75610 366 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 SORBS2O94875 1100 aaKnown RBP7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 PCCBP05166 539 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 CTPS1P17812 591 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 PPARGP37231 505 aaPredicted RBP7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 PTGER3P43115 390 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 CTSOP43234 321 aaPredicted RBP7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 TPMTP51580 245 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 BASP1P80723 227 aaKnown RBP7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 MRPS35P82673 323 aaKnown RBP7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 GBE1Q04446 702 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 SEMA3BQ13214 749 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 CCINQ13939 588 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 PDE1CQ14123 709 aaPredicted RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms