RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 CYP2A6P11509 494 aaPredicted RBP13.09□□□□□ -0.31
CPSF4-206ENST00000441580 ADH5P11766 374 aa13.09□□□□□ -0.31
CPSF4-206ENST00000441580 ZNF30P17039 623 aa13.09□□□□□ -0.31
CPSF4-206ENST00000441580 HNRNPH1P31943 449 aaKnown RBP13.09□□□□□ -0.31
CPSF4-206ENST00000441580 NNMTP40261 264 aa13.09□□□□□ -0.31
CPSF4-206ENST00000441580 COPAP53621 1224 aa13.09□□□□□ -0.31
CPSF4-206ENST00000441580 INHBCP55103 352 aa13.09□□□□□ -0.31
CPSF4-206ENST00000441580 NTHL1P78549 312 aa13.09□□□□□ -0.31
CPSF4-206ENST00000441580 ARHGAP8P85298 464 aa13.09□□□□□ -0.31
CPSF4-206ENST00000441580 NFATC2Q13469 925 aa13.09□□□□□ -0.31
CPSF4-206ENST00000441580 UBAP2LQ14157 1087 aaKnown RBP13.09□□□□□ -0.31
CPSF4-206ENST00000441580 CRY1Q16526 586 aa13.09□□□□□ -0.31
CPSF4-206ENST00000441580 DUSP6Q16828 381 aa13.09□□□□□ -0.31
CPSF4-206ENST00000441580 ZNF678Q5SXM1 525 aa13.09□□□□□ -0.31
CPSF4-206ENST00000441580 BRAT1Q6PJG6 821 aa13.09□□□□□ -0.31
CPSF4-206ENST00000441580 TXNDC11Q6PKC3 985 aa13.09□□□□□ -0.31
CPSF4-206ENST00000441580 ATG14Q6ZNE5 492 aa13.09□□□□□ -0.31
CPSF4-206ENST00000441580 CUZD1Q86UP6 607 aa13.09□□□□□ -0.31
CPSF4-206ENST00000441580 LONP2Q86WA8 852 aa13.09□□□□□ -0.31
CPSF4-206ENST00000441580 TREML1Q86YW5 311 aa13.09□□□□□ -0.31
CPSF4-206ENST00000441580 CD200R1Q8TD46 325 aa13.09□□□□□ -0.31
CPSF4-206ENST00000441580 MAGEC3Q8TD91 643 aa13.09□□□□□ -0.31
CPSF4-206ENST00000441580 SMIM14Q96QK8 99 aa13.09□□□□□ -0.31
CPSF4-206ENST00000441580 CDCA3Q99618 268 aaPredicted RBP13.09□□□□□ -0.31
CPSF4-206ENST00000441580 OSBPL1AQ9BXW6 950 aa13.09□□□□□ -0.31
CPSF4-206ENST00000441580 C1orf21Q9H246 121 aa13.09□□□□□ -0.31
CPSF4-206ENST00000441580 GSTO2Q9H4Y5 243 aa13.09□□□□□ -0.31
CPSF4-206ENST00000441580 SUV39H2Q9H5I1 410 aa13.09□□□□□ -0.31
CPSF4-206ENST00000441580 RAD18Q9NS91 495 aa13.09□□□□□ -0.31
CPSF4-206ENST00000441580 CRLS1Q9UJA2 301 aa13.09□□□□□ -0.31
CPSF4-206ENST00000441580 RNF112Q9ULX5 631 aa13.09□□□□□ -0.31
CPSF4-206ENST00000441580 FAM50BQ9Y247 325 aa13.09□□□□□ -0.31
CPSF4-206ENST00000441580 MED16Q9Y2X0 877 aa13.09□□□□□ -0.31
CPSF4-206ENST00000441580 WNT6Q9Y6F9 365 aa13.09□□□□□ -0.31
CPSF4-206ENST00000441580 NEMP2A6NFY4 417 aa13.08□□□□□ -0.32
CPSF4-206ENST00000441580 SUPT3HB4E1H0 165 aa13.08□□□□□ -0.32
CPSF4-206ENST00000441580 SUPT3HO75486 399 aa13.08□□□□□ -0.32
CPSF4-206ENST00000441580 NFATC1O95644 943 aa13.08□□□□□ -0.32
CPSF4-206ENST00000441580 CYP17A1P05093 508 aa13.08□□□□□ -0.32
CPSF4-206ENST00000441580 SRPRAP08240 638 aaKnown RBP13.08□□□□□ -0.32
CPSF4-206ENST00000441580 GFAPP14136 432 aa13.08□□□□□ -0.32
CPSF4-206ENST00000441580 ACRV1P26436 265 aa13.08□□□□□ -0.32
CPSF4-206ENST00000441580 HNF1BP35680 557 aa13.08□□□□□ -0.32
CPSF4-206ENST00000441580 IL2P60568 153 aa13.08□□□□□ -0.32
CPSF4-206ENST00000441580 POLR2LP62875 67 aaKnown RBP13.08□□□□□ -0.32
CPSF4-206ENST00000441580 HERC3Q15034 1050 aa13.08□□□□□ -0.32
CPSF4-206ENST00000441580 CDKN3Q16667 212 aa13.08□□□□□ -0.32
CPSF4-206ENST00000441580 ACCSLQ4AC99 568 aa13.08□□□□□ -0.32
CPSF4-206ENST00000441580 SLC9B1Q4ZJI4 515 aa13.08□□□□□ -0.32
CPSF4-206ENST00000441580 WASHC2DQ5SRD0 308 aa13.08□□□□□ -0.32
CPSF4-206ENST00000441580 ASTLQ6HA08 431 aaPredicted RBP13.08□□□□□ -0.32
CPSF4-206ENST00000441580 PAQR3Q6TCH7 311 aa13.08□□□□□ -0.32
CPSF4-206ENST00000441580 FAM151BQ6UXP7 276 aa13.08□□□□□ -0.32
CPSF4-206ENST00000441580 EFL1Q7Z2Z2 1120 aaKnown RBP13.08□□□□□ -0.32
CPSF4-206ENST00000441580 ADAMTSL2Q86TH1 951 aa13.08□□□□□ -0.32
CPSF4-206ENST00000441580 ADIPOR2Q86V24 386 aa13.08□□□□□ -0.32
CPSF4-206ENST00000441580 TMPRSS6Q8IU80 811 aa13.08□□□□□ -0.32
CPSF4-206ENST00000441580 FBXO39Q8N4B4 442 aa13.08□□□□□ -0.32
CPSF4-206ENST00000441580 PTGR2Q8N8N7 351 aaPredicted RBP13.08□□□□□ -0.32
CPSF4-206ENST00000441580 KDM1BQ8NB78 822 aa13.08□□□□□ -0.32
CPSF4-206ENST00000441580 AGR3Q8TD06 166 aa13.08□□□□□ -0.32
CPSF4-206ENST00000441580 OSCP1Q8WVF1 389 aa13.08□□□□□ -0.32
CPSF4-206ENST00000441580 ING5Q8WYH8 240 aa13.08□□□□□ -0.32
CPSF4-206ENST00000441580 EXT2Q93063 718 aa13.08□□□□□ -0.32
CPSF4-206ENST00000441580 UTP4Q969X6 686 aaKnown RBP13.08□□□□□ -0.32
CPSF4-206ENST00000441580 LINGO1Q96FE5 620 aa13.08□□□□□ -0.32
CPSF4-206ENST00000441580 SCRN2Q96FV2 425 aa13.08□□□□□ -0.32
CPSF4-206ENST00000441580 LRIG1Q96JA1 1093 aa13.08□□□□□ -0.32
CPSF4-206ENST00000441580 MAELQ96JY0 434 aaKnown RBP13.08□□□□□ -0.32
CPSF4-206ENST00000441580 RPL10LQ96L21 214 aaKnown RBP13.08□□□□□ -0.32
CPSF4-206ENST00000441580 PLEKHG4BQ96PX9 1271 aa13.08□□□□□ -0.32
CPSF4-206ENST00000441580 MIPEPQ99797 713 aa13.08□□□□□ -0.32
CPSF4-206ENST00000441580 OBP2AQ9NY56 170 aa13.08□□□□□ -0.32
CPSF4-206ENST00000441580 NUDT4Q9NZJ9 180 aa13.08□□□□□ -0.32
CPSF4-206ENST00000441580 ZDHHC2Q9UIJ5 367 aa13.08□□□□□ -0.32
CPSF4-206ENST00000441580 ERVW-1Q9UQF0 538 aa13.08□□□□□ -0.32
CPSF4-206ENST00000441580 FNDC3AQ9Y2H6 1198 aaKnown RBP13.08□□□□□ -0.32
CPSF4-206ENST00000441580 MUC22E2RYF6 1773 aaPredicted RBP13.07□□□□□ -0.32
CPSF4-206ENST00000441580 KIAA1549LQ6ZVL6 1849 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 NPEPPSL1A6NEC2 478 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 NPIPB15A6NHN6 443 aaPredicted RBP13.07□□□□□ -0.32
CPSF4-206ENST00000441580 E9PBE3 544 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 BTN3A1O00481 513 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 GAPDHSO14556 408 aaPredicted RBP13.07□□□□□ -0.32
CPSF4-206ENST00000441580 GRID2O43424 1007 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 KLHL41O60662 606 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 MAGEC1O60732 1142 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 NIPSNAP2O75323 286 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 RPS17P08708 135 aaKnown RBP13.07□□□□□ -0.32
CPSF4-206ENST00000441580 MYOGP15173 224 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 BPIP17213 487 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 KCNA5P22460 613 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 DGKGP49619 791 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 RGS4P49798 205 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 MXRA7P84157 204 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 CDC16Q13042 620 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 DHCR24Q15392 516 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 OR4D1Q15615 310 aa13.07□□□□□ -0.32
CPSF4-206ENST00000441580 PDCD2Q16342 344 aaPredicted RBP13.07□□□□□ -0.32
CPSF4-206ENST00000441580 TTLL9Q3SXZ7 439 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms