RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 SNAP47Q5SQN1 464 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 IL31Q6EBC2 164 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 SLC7A14Q8TBB6 771 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 MED30Q96HR3 178 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 MTF2Q9Y483 593 aaPredicted RBP16.74■□□□□ 0.27
PMS1-213ENST00000441310 ANGPTL3Q9Y5C1 460 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 SNX5Q9Y5X3 404 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 NRCAMQ92823 1304 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 APOA4P06727 396 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 HTR1AP08908 422 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 CTSHP09668 335 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 PRKACBP22694 351 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 ALDH7A1P49419 539 aaKnown RBP16.74■□□□□ 0.27
PMS1-213ENST00000441310 PSEN2P49810 448 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 INCA1Q0VD86 236 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 DESI1Q6ICB0 168 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 GATAD2AQ86YP4 633 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 SMG8Q8ND04 991 aaKnown RBP16.74■□□□□ 0.27
PMS1-213ENST00000441310 BEST2Q8NFU1 509 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 ATL1Q8WXF7 558 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 BHMTQ93088 406 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 YME1L1Q96TA2 773 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 TNFRSF12AQ9NP84 129 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 NUDT5Q9UKK9 219 aa16.74■□□□□ 0.27
PMS1-213ENST00000441310 ZFC3H1O60293 1989 aaKnown RBP16.73■□□□□ 0.27
PMS1-213ENST00000441310 SYNJ2BP-COX16A0A087WUM0 186 aa16.73■□□□□ 0.27
PMS1-213ENST00000441310 A0A0A0MRY4 1105 aa16.73■□□□□ 0.27
PMS1-213ENST00000441310 SMIM28A0A1B0GU29 152 aa16.73■□□□□ 0.27
PMS1-213ENST00000441310 DAB1O75553 588 aa16.73■□□□□ 0.27
PMS1-213ENST00000441310 LDLRP01130 860 aa16.73■□□□□ 0.27
PMS1-213ENST00000441310 C7P10643 843 aa16.73■□□□□ 0.27
PMS1-213ENST00000441310 GFAPP14136 432 aa16.73■□□□□ 0.27
PMS1-213ENST00000441310 GP2P55259 537 aaKnown RBP16.73■□□□□ 0.27
PMS1-213ENST00000441310 SKIV2LQ15477 1246 aaKnown RBP16.73■□□□□ 0.27
PMS1-213ENST00000441310 HIST2H2ACQ16777 129 aaPredicted RBP16.73■□□□□ 0.27
PMS1-213ENST00000441310 BOLA3Q53S33 107 aa16.73■□□□□ 0.27
PMS1-213ENST00000441310 SPANXN3Q5MJ09 141 aa16.73■□□□□ 0.27
PMS1-213ENST00000441310 TWF2Q6IBS0 349 aaKnown RBP16.73■□□□□ 0.27
PMS1-213ENST00000441310 FAM20CQ8IXL6 584 aa16.73■□□□□ 0.27
PMS1-213ENST00000441310 SPATA13Q96N96 652 aa16.73■□□□□ 0.27
PMS1-213ENST00000441310 COX16Q9P0S2 106 aa16.73■□□□□ 0.27
PMS1-213ENST00000441310 TEX28O15482 410 aa16.73■□□□□ 0.27
PMS1-213ENST00000441310 SCO2O43819 266 aa16.73■□□□□ 0.27
PMS1-213ENST00000441310 NDUFS2O75306 463 aa16.73■□□□□ 0.27
PMS1-213ENST00000441310 ZNF865P0CJ78 1059 aaPredicted RBP16.73■□□□□ 0.27
PMS1-213ENST00000441310 SERPINB10P48595 397 aa16.73■□□□□ 0.27
PMS1-213ENST00000441310 DCAF4L1Q3SXM0 396 aa16.73■□□□□ 0.27
PMS1-213ENST00000441310 CCDC14Q49A88 953 aa16.73■□□□□ 0.27
PMS1-213ENST00000441310 IRAK1BP1Q5VVH5 260 aa16.73■□□□□ 0.27
PMS1-213ENST00000441310 C9orf57Q5W0N0 161 aa16.73■□□□□ 0.27
PMS1-213ENST00000441310 SPERTQ8NA61 448 aa16.73■□□□□ 0.27
PMS1-213ENST00000441310 ARRDC4Q8NCT1 418 aa16.73■□□□□ 0.27
PMS1-213ENST00000441310 QKIQ96PU8 341 aaKnown RBP eCLIP16.73■□□□□ 0.277e-8■■■■□ 22.9
PMS1-213ENST00000441310 NAT9Q9BTE0 207 aa16.73■□□□□ 0.27
PMS1-213ENST00000441310 CHID1Q9BWS9 393 aa16.73■□□□□ 0.27
PMS1-213ENST00000441310 DNAI2Q9GZS0 605 aa16.73■□□□□ 0.27
PMS1-213ENST00000441310 TRIM39Q9HCM9 518 aa16.73■□□□□ 0.27
PMS1-213ENST00000441310 TLR9Q9NR96 1032 aa16.73■□□□□ 0.27
PMS1-213ENST00000441310 ADPRHL2Q9NX46 363 aa16.73■□□□□ 0.27
PMS1-213ENST00000441310 PNMA8BQ9ULN7 279 aaPredicted RBP16.73■□□□□ 0.27
PMS1-213ENST00000441310 MYADML2A6NDP7 307 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 KRT6CP48668 564 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 KIF19Q2TAC6 998 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 PYCR3Q53H96 274 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 THAP5Q7Z6K1 395 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 NT5DC4Q86YG4 428 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 LYSMD2Q8IV50 215 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 CLEC4FQ8N1N0 589 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 TTC39CQ8N584 583 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 GOLM1Q8NBJ4 401 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 HCAR2Q8TDS4 363 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 AP5M1Q9H0R1 490 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 PIF1Q9H611 641 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 PLEKHA5Q9HAU0 1116 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 C16orf96A6NNT2 1141 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 ALX3O95076 343 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 ITIH1P19827 911 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 AGXTP21549 392 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 AFF1P51825 1210 aaKnown RBP16.72■□□□□ 0.27
PMS1-213ENST00000441310 CHRNEQ04844 493 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 CDC20Q12834 499 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 VPS26BQ4G0F5 336 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 SPATC1Q76KD6 591 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 DNAAF3Q8N9W5 541 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 PSD4Q8NDX1 1056 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 STYXQ8WUJ0 223 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 EGLN2Q96KS0 407 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 IRF2BPLQ9H1B7 796 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 OSBPL2Q9H1P3 480 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 GIMAP4Q9NUV9 329 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 GMIPQ9P107 970 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 HOXD8P13378 290 aaPredicted RBP16.72■□□□□ 0.27
PMS1-213ENST00000441310 RDH11Q8TC12 318 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 MUL1Q969V5 352 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 NACC2Q96BF6 587 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 C1QTNF1Q9BXJ1 281 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 OR2B2Q9GZK3 357 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 POMKQ9H5K3 350 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 SP140LQ9H930 580 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 HPS4Q9NQG7 708 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms