RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 ISCUQ9H1K1 167 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 EPB41L5Q9HCM4 733 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 SEPT11Q9NVA2 429 aaKnown RBP3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 TRNAU1APQ9NX07 287 aaKnown RBP3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 CYP39A1Q9NYL5 469 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 ELOVL5Q9NYP7 299 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 SLC9A2Q9UBY0 812 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 FBXO40Q9UH90 709 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 MID2Q9UJV3 735 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 ITGB1BP2Q9UKP3 347 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 TTC7AQ9ULT0 858 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 DRG1Q9Y295 367 aaKnown RBP3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 AFG3L2Q9Y4W6 797 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 CDY1Q9Y6F8 540 aa3.57□□□□□ -1.84
HMGB3P11-201ENST00000440127 PFASO15067 1338 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 IGSF9BQ9UPX0 1349 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 ERICH4A6NGS2 130 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 ZNF233A6NK53 670 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 KRTAP29-1A8MX34 341 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 MIF4GDA9UHW6 222 aaKnown RBP3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 B4E171 279 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 GOLGA8KD6RF30 607 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 AGPSO00116 658 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 AP4M1O00189 453 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 TP73O15350 636 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 RAD51CO43502 376 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 EXTL3O43909 919 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 ZC3H11AO75152 810 aaKnown RBP eCLIP3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 PMPCBO75439 489 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 RASSF9O75901 435 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 BAIAP3O94812 1187 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 SGPL1O95470 568 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 TOP3BO95985 862 aaKnown RBP3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 MT-CO3P00414 261 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 ADRB2P07550 413 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 SUPT20HL2P0C7V6 817 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 CYP2A6P11509 494 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 CHRNB2P17787 502 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 EGR1P18146 543 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 CST5P28325 142 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 ADSSP30520 456 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 TSPAN7P41732 249 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 LMAN1P49257 510 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 GPC3P51654 580 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 HADHBP55084 474 aaKnown RBP3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 ACTR2P61160 394 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 GPC5P78333 572 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 SP2Q02086 613 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 CYP24A1Q07973 514 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 CUL1Q13616 776 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 DAZAP2Q15038 168 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 CYP1B1Q16678 543 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 CFAP58Q5T655 872 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 TAF3Q5VWG9 929 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 C11orf63Q6NUN7 778 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 SLC39A4Q6P5W5 647 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 CFAP161Q6P656 301 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 C16orf54Q6UWD8 224 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 LEKR1Q6ZMV7 388 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 SEPT14Q6ZU15 432 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 ENOSF1Q7L5Y1 443 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 BHLHA9Q7RTU4 235 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 HEATR4Q86WZ0 1026 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 DNAAF5Q86Y56 855 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 ZNF280BQ86YH2 543 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 CBWD2Q8IUF1 395 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 CCDC60Q8IWA6 550 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 FAM71AQ8IYT1 594 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 GPC2Q8N158 579 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 UBL4BQ8N7F7 174 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 NANOGP1Q8N7R0 232 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 C9orf106Q8NAJ2 232 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 PCYOX1LQ8NBM8 494 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 FBXL13Q8NEE6 735 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 OSR1Q8TAX0 266 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 AFAP1L1Q8TED9 768 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 SLC20A1Q8WUM9 679 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 PSPC1Q8WXF1 523 aaKnown RBP3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 IFT81Q8WYA0 676 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 POMGNT1Q8WZA1 660 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 CCDC127Q96BQ5 260 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 ARHGEF26Q96DR7 871 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 SAAL1Q96ER3 474 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 BICD1Q96G01 975 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 SNX27Q96L92 541 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 LENG8Q96PV6 779 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 PRR25Q96S07 402 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 RUFY1Q96T51 708 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 PCDHB18PQ96TA0 734 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 NAP1L3Q99457 506 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 MACROD1Q9BQ69 325 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 DDX23Q9BUQ8 820 aaKnown RBP3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 THAP2Q9H0W7 228 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 POLR3FQ9H1D9 316 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 TAF1DQ9H5J8 278 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 XPNPEP1Q9NQW7 623 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 ZNF302Q9NR11 478 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 FAM114A2Q9NRY5 505 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 NRBP2Q9NSY0 501 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 TBC1D23Q9NUY8 699 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms