RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 RAB44Q7Z6P3 723 aaPredicted RBP11.7□□□□□ -0.54
SMAD3-202ENST00000439724 KIAA0907Q7Z7F0 614 aaPredicted RBP11.7□□□□□ -0.54
SMAD3-202ENST00000439724 CUZD1Q86UP6 607 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 ZSWIM9Q86XI8 627 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 PLPP6Q8IY26 295 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 PHTF2Q8N3S3 785 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 RYBPQ8N488 228 aaPredicted RBP11.7□□□□□ -0.54
SMAD3-202ENST00000439724 KIAA1958Q8N8K9 716 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 PTGR2Q8N8N7 351 aaPredicted RBP11.7□□□□□ -0.54
SMAD3-202ENST00000439724 FBXO27Q8NI29 283 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 CD200R1Q8TD46 325 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 AGAP11Q8TF27 550 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 CMTM5Q96DZ9 223 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 PHF21BQ96EK2 531 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 RPL10LQ96L21 214 aaKnown RBP11.7□□□□□ -0.54
SMAD3-202ENST00000439724 OSBPL1AQ9BXW6 950 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 SLC2A11Q9BYW1 496 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 SHCBP1LQ9BZQ2 653 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 DENND2DQ9H6A0 471 aaPredicted RBP11.7□□□□□ -0.54
SMAD3-202ENST00000439724 DPP7Q9UHL4 492 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 TRMT6Q9UJA5 497 aaKnown RBP11.7□□□□□ -0.54
SMAD3-202ENST00000439724 APPL1Q9UKG1 709 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 TMCO1Q9UM00 188 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 GOLGA8QA0A0J9YX86 632 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 A0A1W2PQ67 120 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 GOLGA8OA6NCC3 632 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 GOLGA8CPA6NN73 597 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 SYCE1LA8MT33 242 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 TMEM233B4DJY2 109 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 GOLGA8NF8WBI6 632 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 UBXN8O00124 270 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 SDHDO14521 159 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 NEMP1O14524 444 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 SLC9A3R1O14745 358 aaPredicted RBP11.7□□□□□ -0.54
SMAD3-202ENST00000439724 DCXO43602 365 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 KLK8O60259 260 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 PEX11AO75192 247 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 SUPT7LO94864 414 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 PRAMEF1O95521 474 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 POP4O95707 220 aaKnown RBP11.7□□□□□ -0.54
SMAD3-202ENST00000439724 TSPAN12O95859 305 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 JUNP05412 331 aaKnown RBP11.7□□□□□ -0.54
SMAD3-202ENST00000439724 TYRP14679 529 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 CEBPBP17676 345 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 EPHA3P29320 983 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 CPOXP36551 454 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 C1QTNF8P60827 252 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 PDCD2Q16342 344 aaPredicted RBP11.7□□□□□ -0.54
SMAD3-202ENST00000439724 CARD16Q5EG05 197 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 LY6G5CQ5SRR4 150 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 LYPLAL1Q5VWZ2 237 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 GRAMD4Q6IC98 578 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 GRASPQ7Z6J2 395 aaPredicted RBP11.7□□□□□ -0.54
SMAD3-202ENST00000439724 PAF1Q8N7H5 531 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 GIMAP7Q8NHV1 300 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 FAM136AQ96C01 138 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 ZNF707Q96C28 371 aaPredicted RBP11.7□□□□□ -0.54
SMAD3-202ENST00000439724 ZNF641Q96N77 438 aaPredicted RBP11.7□□□□□ -0.54
SMAD3-202ENST00000439724 SAMD11Q96NU1 681 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 MCCC1Q96RQ3 725 aaPredicted RBP11.7□□□□□ -0.54
SMAD3-202ENST00000439724 TTC1Q99614 292 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 SLC30A3Q99726 388 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 SUV39H2Q9H5I1 410 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 MEAF6Q9HAF1 191 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 IKZF3Q9UKT9 509 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 RNF112Q9ULX5 631 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 FNDC3AQ9Y2H6 1198 aaKnown RBP11.7□□□□□ -0.54
SMAD3-202ENST00000439724 NPIPB15A6NHN6 443 aaPredicted RBP11.69□□□□□ -0.54
SMAD3-202ENST00000439724 WASH3PC4AMC7 463 aa11.69□□□□□ -0.54
SMAD3-202ENST00000439724 STX16-NPEPL1H3BU86 382 aa11.69□□□□□ -0.54
SMAD3-202ENST00000439724 STX16O14662 325 aa11.69□□□□□ -0.54
SMAD3-202ENST00000439724 TM7SF2O76062 418 aa11.69□□□□□ -0.54
SMAD3-202ENST00000439724 CLDN7O95471 211 aa11.69□□□□□ -0.54
SMAD3-202ENST00000439724 HSPA1AP0DMV8 641 aaKnown RBP11.69□□□□□ -0.54
SMAD3-202ENST00000439724 HSPA1BP0DMV9 641 aaKnown RBP11.69□□□□□ -0.54
SMAD3-202ENST00000439724 COX4I1P13073 169 aa11.69□□□□□ -0.54
SMAD3-202ENST00000439724 BMP1P13497 986 aa11.69□□□□□ -0.54
SMAD3-202ENST00000439724 ZNF7P17097 686 aaPredicted RBP11.69□□□□□ -0.54
SMAD3-202ENST00000439724 BPIP17213 487 aa11.69□□□□□ -0.54
SMAD3-202ENST00000439724 SYN1P17600 705 aa11.69□□□□□ -0.54
SMAD3-202ENST00000439724 SPAM1P38567 509 aa11.69□□□□□ -0.54
SMAD3-202ENST00000439724 CCNHP51946 323 aaPredicted RBP11.69□□□□□ -0.54
SMAD3-202ENST00000439724 IL2P60568 153 aa11.69□□□□□ -0.54
SMAD3-202ENST00000439724 ECT2LQ008S8 904 aa11.69□□□□□ -0.54
SMAD3-202ENST00000439724 BTKQ06187 659 aa11.69□□□□□ -0.54
SMAD3-202ENST00000439724 NFATC2Q13469 925 aa11.69□□□□□ -0.54
SMAD3-202ENST00000439724 HERC3Q15034 1050 aa11.69□□□□□ -0.54
SMAD3-202ENST00000439724 GPR33Q49SQ1 333 aa11.69□□□□□ -0.54
SMAD3-202ENST00000439724 FAM151BQ6UXP7 276 aa11.69□□□□□ -0.54
SMAD3-202ENST00000439724 TPRG1Q6ZUI0 275 aa11.69□□□□□ -0.54
SMAD3-202ENST00000439724 USP45Q70EL2 814 aa11.69□□□□□ -0.54
SMAD3-202ENST00000439724 ADIPOR2Q86V24 386 aa11.69□□□□□ -0.54
SMAD3-202ENST00000439724 SERPINA9Q86WD7 417 aa11.69□□□□□ -0.54
SMAD3-202ENST00000439724 RBFAQ8N0V3 343 aa11.69□□□□□ -0.54
SMAD3-202ENST00000439724 POU5F2Q8N7G0 328 aa11.69□□□□□ -0.54
SMAD3-202ENST00000439724 SIDT2Q8NBJ9 832 aaKnown RBP11.69□□□□□ -0.54
SMAD3-202ENST00000439724 CEP70Q8NHQ1 597 aa11.69□□□□□ -0.54
SMAD3-202ENST00000439724 ACTRT2Q8TDY3 377 aa11.69□□□□□ -0.54
SMAD3-202ENST00000439724 EXT2Q93063 718 aa11.69□□□□□ -0.54
SMAD3-202ENST00000439724 SCRN2Q96FV2 425 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms