RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 ARL5AQ9Y689 179 aa11.73□□□□□ -0.53
HSPG2-206ENST00000439717 GLYATL1P3A0A0U1RQE8 302 aa11.72□□□□□ -0.53
HSPG2-206ENST00000439717 GPR89AB7ZAQ6 455 aa11.72□□□□□ -0.53
HSPG2-206ENST00000439717 YY2O15391 372 aa11.72□□□□□ -0.53
HSPG2-206ENST00000439717 SIGLEC6O43699 453 aa11.72□□□□□ -0.53
HSPG2-206ENST00000439717 SLC25A14O95258 325 aaPredicted RBP11.72□□□□□ -0.53
HSPG2-206ENST00000439717 TRIM16O95361 564 aa11.72□□□□□ -0.53
HSPG2-206ENST00000439717 ASMTLO95671 621 aa11.72□□□□□ -0.53
HSPG2-206ENST00000439717 KRT14P02533 472 aa11.72□□□□□ -0.53
HSPG2-206ENST00000439717 APRTP07741 180 aa11.72□□□□□ -0.53
HSPG2-206ENST00000439717 GPR89BP0CG08 455 aa11.72□□□□□ -0.53
HSPG2-206ENST00000439717 CKMT2P17540 419 aa11.72□□□□□ -0.53
HSPG2-206ENST00000439717 GNPDA1P46926 289 aa11.72□□□□□ -0.53
HSPG2-206ENST00000439717 POLD2P49005 469 aa11.72□□□□□ -0.53
HSPG2-206ENST00000439717 ETF1P62495 437 aaKnown RBP11.72□□□□□ -0.53
HSPG2-206ENST00000439717 CDK16Q00536 496 aa11.72□□□□□ -0.53
HSPG2-206ENST00000439717 FOXK2Q01167 660 aa11.72□□□□□ -0.53
HSPG2-206ENST00000439717 C1orf61Q13536 156 aa11.72□□□□□ -0.53
HSPG2-206ENST00000439717 PEX6Q13608 980 aa11.72□□□□□ -0.53
HSPG2-206ENST00000439717 N4BP2L1Q5TBK1 243 aaPredicted RBP11.72□□□□□ -0.53
HSPG2-206ENST00000439717 KCTD16Q68DU8 428 aa11.72□□□□□ -0.53
HSPG2-206ENST00000439717 DOK6Q6PKX4 331 aa11.72□□□□□ -0.53
HSPG2-206ENST00000439717 PPP1R21Q6ZMI0 780 aa11.72□□□□□ -0.53
HSPG2-206ENST00000439717 NYAP1Q6ZVC0 841 aa11.72□□□□□ -0.53
HSPG2-206ENST00000439717 TRIM74Q86UV6 250 aa11.72□□□□□ -0.53
HSPG2-206ENST00000439717 CREG2Q8IUH2 290 aa11.72□□□□□ -0.53
HSPG2-206ENST00000439717 PHYKPLQ8IUZ5 450 aa11.72□□□□□ -0.53
HSPG2-206ENST00000439717 DNAAF3Q8N9W5 541 aa11.72□□□□□ -0.53
HSPG2-206ENST00000439717 OR4K2Q8NGD2 314 aa11.72□□□□□ -0.53
HSPG2-206ENST00000439717 OR52K1Q8NGK4 314 aa11.72□□□□□ -0.53
HSPG2-206ENST00000439717 GLMNQ92990 594 aa11.72□□□□□ -0.53
HSPG2-206ENST00000439717 BOCQ9BWV1 1114 aa11.72□□□□□ -0.53
HSPG2-206ENST00000439717 TMEM168Q9H0V1 697 aa11.72□□□□□ -0.53
HSPG2-206ENST00000439717 TRIM39Q9HCM9 518 aa11.72□□□□□ -0.53
HSPG2-206ENST00000439717 CASS4Q9NQ75 786 aa11.72□□□□□ -0.53
HSPG2-206ENST00000439717 APPL1Q9UKG1 709 aa11.72□□□□□ -0.53
HSPG2-206ENST00000439717 TMEM98Q9Y2Y6 226 aa11.72□□□□□ -0.53
HSPG2-206ENST00000439717 PCDHGA1Q9Y5H4 931 aa11.72□□□□□ -0.53
HSPG2-206ENST00000439717 CABIN1Q9Y6J0 2220 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 LRP4O75096 1905 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 LDB2O43679 373 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 BUD23O43709 281 aaKnown RBP11.71□□□□□ -0.53
HSPG2-206ENST00000439717 VEGFDO43915 354 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 DKK1O94907 266 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 FUCA1P04066 466 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 ADRB1P08588 477 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 FTH1P19P0C7X4 201 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 CDK4P11802 303 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 CKMT1AP12532 417 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 TPH1P17752 444 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 TPSB2P20231 275 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 ACP1P24666 158 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 CASQ1P31415 396 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 PAFAH1B1P43034 410 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 RPIAP49247 311 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 DUSP3P51452 185 aaPredicted RBP11.71□□□□□ -0.53
HSPG2-206ENST00000439717 ZNF140P52738 457 aaPredicted RBP11.71□□□□□ -0.53
HSPG2-206ENST00000439717 BASP1P80723 227 aaKnown RBP11.71□□□□□ -0.53
HSPG2-206ENST00000439717 ILF3Q12906 894 aaKnown RBP eCLIP11.71□□□□□ -0.53
HSPG2-206ENST00000439717 ILKQ13418 452 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 LRP8Q14114 963 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 POU6F1Q14863 301 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 TPSAB1Q15661 275 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 CHRNA6Q15825 494 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 DEFB133Q30KQ1 61 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 ATP13A5Q4VNC0 1218 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 PYCR3Q53H96 274 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 C6orf132Q5T0Z8 1188 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 FAM151BQ6UXP7 276 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 TAF8Q7Z7C8 310 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 GALNT13Q8IUC8 556 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 C17orf53Q8N3J3 647 aaPredicted RBP11.71□□□□□ -0.53
HSPG2-206ENST00000439717 GPBAR1Q8TDU6 330 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 STYXQ8WUJ0 223 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 SLCO2A1Q92959 643 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 APOLD1Q96LR9 279 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 RUNDC3BQ96NL0 473 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 OR2M4Q96R27 311 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 RANBP9Q96S59 729 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 GSDMCQ9BYG8 508 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 SMOXQ9NWM0 555 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 TOR4AQ9NXH8 423 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 NEU2Q9Y3R4 380 aa11.71□□□□□ -0.53
HSPG2-206ENST00000439717 OAS3Q9Y6K5 1087 aaKnown RBP11.71□□□□□ -0.53
HSPG2-206ENST00000439717 SCN8AQ9UQD0 1980 aa11.7□□□□□ -0.54
HSPG2-206ENST00000439717 HEATR9A2RTY3 570 aa11.7□□□□□ -0.54
HSPG2-206ENST00000439717 MROH6A6NGR9 719 aa11.7□□□□□ -0.54
HSPG2-206ENST00000439717 H7C0S8 307 aa11.7□□□□□ -0.54
HSPG2-206ENST00000439717 GAPDHSO14556 408 aaPredicted RBP11.7□□□□□ -0.54
HSPG2-206ENST00000439717 FANCGO15287 622 aa11.7□□□□□ -0.54
HSPG2-206ENST00000439717 NUAK1O60285 661 aa11.7□□□□□ -0.54
HSPG2-206ENST00000439717 DNAJC6O75061 913 aa11.7□□□□□ -0.54
HSPG2-206ENST00000439717 SRP72O76094 671 aaKnown RBP11.7□□□□□ -0.54
HSPG2-206ENST00000439717 PRAMEF1O95521 474 aa11.7□□□□□ -0.54
HSPG2-206ENST00000439717 ECEL1O95672 775 aa11.7□□□□□ -0.54
HSPG2-206ENST00000439717 CELA2BP08218 269 aaPredicted RBP11.7□□□□□ -0.54
HSPG2-206ENST00000439717 ADRA1DP25100 572 aa11.7□□□□□ -0.54
HSPG2-206ENST00000439717 PSMA3P25788 255 aa11.7□□□□□ -0.54
HSPG2-206ENST00000439717 ADCY8P40145 1251 aa11.7□□□□□ -0.54
HSPG2-206ENST00000439717 MAGEA6P43360 314 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms