RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 CPLX2Q6PUV4 134 aaKnown RBP3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 TMTC3Q6ZXV5 915 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 CREB3L2Q70SY1 520 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 FJX1Q86VR8 437 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 ZCCHC9Q8N567 271 aaKnown RBP3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 PARP16Q8N5Y8 322 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 DEFB123Q8N688 67 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 MIGA1Q8NAN2 632 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 ZNF114Q8NC26 417 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 GJC3Q8NFK1 279 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 ETNPPLQ8TBG4 499 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 PERPQ96FX8 193 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 DUX5Q96PT3 197 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 SPATS2LQ9NUQ6 558 aaKnown RBP3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 NDRG3Q9UGV2 375 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 HACL1Q9UJ83 578 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 A4GNTQ9UNA3 340 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 PIAS3Q9Y6X2 628 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 LMO7Q8WWI1 1683 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 CRYBG1Q9Y4K1 1723 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 ABCC6O95255 1503 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 KDM3AQ9Y4C1 1321 aa3.38□□□□□ -1.87
HMGB3P12-201ENST00000438745 KDM6AO15550 1401 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 ANKRD50Q9ULJ7 1429 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 DYTNA2CJ06 578 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 LRRC53A6NM62 1247 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 EIF3CLB5ME19 914 aaKnown RBP3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 NPIPB11E5RHQ5 1161 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 EBAG9O00559 213 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 USO1O60763 962 aaKnown RBP3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 HNRNPCL1O60812 293 aaKnown RBP3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 SERPINI2O75830 405 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 VNN2O95498 520 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 HEXAP06865 529 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 PCNAP12004 261 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 DAOP14920 347 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 IL7RP16871 459 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 EPHX2P34913 555 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 RYKP34925 604 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 CPOXP36551 454 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 PBX3P40426 434 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 COMPP49747 757 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 EIF3BP55884 814 aaKnown RBP3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 TMF1P82094 1093 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 SETQ01105 290 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 FRG1Q14331 258 aaKnown RBP3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 RNPS1Q15287 305 aaKnown RBP3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 GSTA3Q16772 222 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 SOWAHAQ2M3V2 549 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 ESCO2Q56NI9 601 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 SLC45A4Q5BKX6 768 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 CDC73Q6P1J9 531 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 TMED8Q6PL24 325 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 CCDC129Q6ZRS4 1044 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 AADATQ8N5Z0 425 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 PDILTQ8N807 584 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 WFIKKN2Q8TEU8 576 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 TMED6Q8WW62 240 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 SNAPC3Q92966 411 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 SMARCE1Q969G3 411 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 SLITRK1Q96PX8 696 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 PRAM1Q96QH2 718 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 MXRA8Q9BRK3 442 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 CHCHD6Q9BRQ6 235 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 BRF2Q9HAW0 419 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 BPIFA1Q9NP55 256 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 BLOC1S4Q9NUP1 217 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 OCIAD1Q9NX40 245 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 ANKRD10Q9NXR5 420 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 CARD8Q9Y2G2 431 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 PSAT1Q9Y617 370 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 SCINQ9Y6U3 715 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 CAPN7Q9Y6W3 813 aa3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 N4BP2Q86UW6 1770 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P12-201ENST00000438745 DAPK1P53355 1430 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 ITSN1Q15811 1721 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 IFT172Q9UG01 1749 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 A0A087X0M5 115 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 FAM237BA0A1B0GVD1 139 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 A0A1B0GX30 115 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 A0A1W2PQM1 296 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 DENND3A2RUS2 1198 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 PI4KAP2A4QPH2 592 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 PGPEP1LA6NFU8 196 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 J3KR12 359 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 WNT9BO14905 357 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 KRT36O76013 467 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 BAIAP3O94812 1187 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 TMEM63AO94886 807 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 TFP02787 698 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 CLEC3BP05452 202 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 IRF1P10914 325 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 KRT10P13645 584 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 ITGAXP20702 1163 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 CHMP24386 653 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 MAPK4P31152 587 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 ARL3P36405 182 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 PIGAP37287 484 aa3.36□□□□□ -1.87
HMGB3P12-201ENST00000438745 RXRGP48443 463 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms