RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 TCEA3O75764 348 aa24.54■■□□□ 1.52
RAPGEF1-206ENST00000438647 CHRNA4P43681 627 aa24.54■■□□□ 1.52
RAPGEF1-206ENST00000438647 CCZ1BP86790 482 aa24.54■■□□□ 1.52
RAPGEF1-206ENST00000438647 CCZ1P86791 482 aaPredicted RBP24.54■■□□□ 1.52
RAPGEF1-206ENST00000438647 LRP8Q14114 963 aa24.54■■□□□ 1.52
RAPGEF1-206ENST00000438647 C14orf28Q4W4Y0 310 aa24.54■■□□□ 1.52
RAPGEF1-206ENST00000438647 MARK2Q7KZI7 788 aaKnown RBP24.54■■□□□ 1.52
RAPGEF1-206ENST00000438647 CCDC110Q8TBZ0 833 aa24.54■■□□□ 1.52
RAPGEF1-206ENST00000438647 NRSN2Q9GZP1 204 aa24.54■■□□□ 1.52
RAPGEF1-206ENST00000438647 LZTFL1Q9NQ48 299 aa24.54■■□□□ 1.52
RAPGEF1-206ENST00000438647 TAAR2Q9P1P5 351 aa24.54■■□□□ 1.52
RAPGEF1-206ENST00000438647 C5orf60A6NFR6 353 aa24.53■■□□□ 1.52
RAPGEF1-206ENST00000438647 CAPNS1P04632 268 aa24.53■■□□□ 1.52
RAPGEF1-206ENST00000438647 GLB1P16278 677 aa24.53■■□□□ 1.52
RAPGEF1-206ENST00000438647 BPIP17213 487 aa24.53■■□□□ 1.52
RAPGEF1-206ENST00000438647 PSMB4P28070 264 aa24.53■■□□□ 1.52
RAPGEF1-206ENST00000438647 CTBSQ01459 385 aa24.53■■□□□ 1.52
RAPGEF1-206ENST00000438647 RPS6KA1Q15418 735 aa24.53■■□□□ 1.52
RAPGEF1-206ENST00000438647 PYCR3Q53H96 274 aa24.53■■□□□ 1.52
RAPGEF1-206ENST00000438647 SLC30A9Q6PML9 568 aa24.53■■□□□ 1.52
RAPGEF1-206ENST00000438647 GLT6D1Q7Z4J2 308 aa24.53■■□□□ 1.52
RAPGEF1-206ENST00000438647 NRROSQ86YC3 692 aa24.53■■□□□ 1.52
RAPGEF1-206ENST00000438647 BLOC1S5Q8TDH9 187 aa24.53■■□□□ 1.52
RAPGEF1-206ENST00000438647 PTCD2Q8WV60 388 aaKnown RBP24.53■■□□□ 1.52
RAPGEF1-206ENST00000438647 CCDC74AQ96AQ1 378 aa24.53■■□□□ 1.52
RAPGEF1-206ENST00000438647 GRAMD1AQ96CP6 724 aa24.53■■□□□ 1.52
RAPGEF1-206ENST00000438647 FICDQ9BVA6 458 aa24.53■■□□□ 1.52
RAPGEF1-206ENST00000438647 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP24.53■■□□□ 1.52
RAPGEF1-206ENST00000438647 GOLGA6L3A6NEY3 463 aa24.52■■□□□ 1.52
RAPGEF1-206ENST00000438647 GPR89AB7ZAQ6 455 aa24.52■■□□□ 1.52
RAPGEF1-206ENST00000438647 AURKAO14965 403 aa24.52■■□□□ 1.52
RAPGEF1-206ENST00000438647 NOBOXO60393 691 aa24.52■■□□□ 1.52
RAPGEF1-206ENST00000438647 PPFIA2O75334 1257 aa24.52■■□□□ 1.52
RAPGEF1-206ENST00000438647 SLC25A14O95258 325 aaPredicted RBP24.52■■□□□ 1.52
RAPGEF1-206ENST00000438647 ATP1A1P05023 1023 aaKnown RBP24.52■■□□□ 1.52
RAPGEF1-206ENST00000438647 GPR89BP0CG08 455 aa24.52■■□□□ 1.52
RAPGEF1-206ENST00000438647 PNLIPP16233 465 aa24.52■■□□□ 1.52
RAPGEF1-206ENST00000438647 AK4P27144 223 aaPredicted RBP24.52■■□□□ 1.52
RAPGEF1-206ENST00000438647 ACTR1BP42025 376 aa24.52■■□□□ 1.52
RAPGEF1-206ENST00000438647 ACTR1AP61163 376 aa24.52■■□□□ 1.52
RAPGEF1-206ENST00000438647 CERCAMQ5T4B2 595 aa24.52■■□□□ 1.52
RAPGEF1-206ENST00000438647 MEI1Q5TIA1 1274 aa24.52■■□□□ 1.52
RAPGEF1-206ENST00000438647 RBM44Q6ZP01 1051 aaKnown RBP24.52■■□□□ 1.52
RAPGEF1-206ENST00000438647 ARHGEF18Q6ZSZ5 1173 aa24.52■■□□□ 1.52
RAPGEF1-206ENST00000438647 PROSER1Q86XN7 944 aa24.52■■□□□ 1.52
RAPGEF1-206ENST00000438647 PHYKPLQ8IUZ5 450 aa24.52■■□□□ 1.52
RAPGEF1-206ENST00000438647 MDM1Q8TC05 714 aa24.52■■□□□ 1.52
RAPGEF1-206ENST00000438647 ZDHHC1Q8WTX9 485 aa24.52■■□□□ 1.52
RAPGEF1-206ENST00000438647 FRMD8P1Q9BZ68 369 aaPredicted RBP24.52■■□□□ 1.52
RAPGEF1-206ENST00000438647 CARD9Q9H257 536 aa24.52■■□□□ 1.52
RAPGEF1-206ENST00000438647 SPATS2LQ9NUQ6 558 aaKnown RBP24.52■■□□□ 1.52
RAPGEF1-206ENST00000438647 ZNHIT2Q9UHR6 403 aa24.52■■□□□ 1.52
RAPGEF1-206ENST00000438647 PKP3Q9Y446 797 aa24.52■■□□□ 1.52
RAPGEF1-206ENST00000438647 OAS3Q9Y6K5 1087 aaKnown RBP24.52■■□□□ 1.52
RAPGEF1-206ENST00000438647 USP24Q9UPU5 2620 aa24.51■■□□□ 1.51
RAPGEF1-206ENST00000438647 CSO75390 466 aaKnown RBP24.51■■□□□ 1.51
RAPGEF1-206ENST00000438647 SPIDRQ14159 915 aa24.51■■□□□ 1.51
RAPGEF1-206ENST00000438647 HLTFQ14527 1009 aaKnown RBP eCLIP24.51■■□□□ 1.51
RAPGEF1-206ENST00000438647 TTC30BQ8N4P2 665 aa24.51■■□□□ 1.51
RAPGEF1-206ENST00000438647 FAM71DQ8N9W8 422 aa24.51■■□□□ 1.51
RAPGEF1-206ENST00000438647 TRIM58Q8NG06 486 aa24.51■■□□□ 1.51
RAPGEF1-206ENST00000438647 SLC35B2Q8TB61 432 aa24.51■■□□□ 1.51
RAPGEF1-206ENST00000438647 GLYATL1Q969I3 302 aa24.51■■□□□ 1.51
RAPGEF1-206ENST00000438647 GORASP1Q9BQQ3 440 aa24.51■■□□□ 1.51
RAPGEF1-206ENST00000438647 APPL1Q9UKG1 709 aa24.51■■□□□ 1.51
RAPGEF1-206ENST00000438647 R3HDM2Q9Y2K5 976 aaKnown RBP24.51■■□□□ 1.51
RAPGEF1-206ENST00000438647 RP1P56715 2156 aa24.51■■□□□ 1.51
RAPGEF1-206ENST00000438647 NUDT21O43809 227 aaKnown RBP24.5■■□□□ 1.51
RAPGEF1-206ENST00000438647 DNAJC6O75061 913 aa24.5■■□□□ 1.51
RAPGEF1-206ENST00000438647 AGTP01019 485 aa24.5■■□□□ 1.51
RAPGEF1-206ENST00000438647 CYP4F3Q08477 520 aa24.5■■□□□ 1.51
RAPGEF1-206ENST00000438647 RTP5Q14D33 572 aa24.5■■□□□ 1.51
RAPGEF1-206ENST00000438647 RANBP10Q6VN20 620 aa24.5■■□□□ 1.51
RAPGEF1-206ENST00000438647 DTX3LQ8TDB6 740 aa24.5■■□□□ 1.51
RAPGEF1-206ENST00000438647 SYNDIG1Q9H7V2 258 aa24.5■■□□□ 1.51
RAPGEF1-206ENST00000438647 TRIM39Q9HCM9 518 aa24.5■■□□□ 1.51
RAPGEF1-206ENST00000438647 BPIFA1Q9NP55 256 aa24.5■■□□□ 1.51
RAPGEF1-206ENST00000438647 IL17CQ9P0M4 197 aa24.5■■□□□ 1.51
RAPGEF1-206ENST00000438647 AK5Q9Y6K8 562 aa24.5■■□□□ 1.51
RAPGEF1-206ENST00000438647 CACNA1BQ00975 2339 aa24.5■■□□□ 1.51
RAPGEF1-206ENST00000438647 MYLKQ15746 1914 aa24.49■■□□□ 1.51
RAPGEF1-206ENST00000438647 ARHGEF17Q96PE2 2063 aaPredicted RBP24.49■■□□□ 1.51
RAPGEF1-206ENST00000438647 TCRBV7S2A1N4TA0A589 114 aa24.49■■□□□ 1.51
RAPGEF1-206ENST00000438647 NUAK1O60285 661 aa24.49■■□□□ 1.51
RAPGEF1-206ENST00000438647 ADRA1AP35348 466 aa24.49■■□□□ 1.51
RAPGEF1-206ENST00000438647 SPAM1P38567 509 aa24.49■■□□□ 1.51
RAPGEF1-206ENST00000438647 BIRC2Q13490 618 aa24.49■■□□□ 1.51
RAPGEF1-206ENST00000438647 ISXQ2M1V0 245 aa24.49■■□□□ 1.51
RAPGEF1-206ENST00000438647 PARP6Q2NL67 630 aa24.49■■□□□ 1.51
RAPGEF1-206ENST00000438647 P3H1Q32P28 736 aa24.49■■□□□ 1.51
RAPGEF1-206ENST00000438647 SLC13A5Q86YT5 568 aaPredicted RBP24.49■■□□□ 1.51
RAPGEF1-206ENST00000438647 VPS35Q96QK1 796 aa24.49■■□□□ 1.51
RAPGEF1-206ENST00000438647 TMEM121Q9BTD3 319 aa24.49■■□□□ 1.51
RAPGEF1-206ENST00000438647 LRIT1Q9P2V4 623 aa24.49■■□□□ 1.51
RAPGEF1-206ENST00000438647 FEZ2Q9UHY8 353 aaPredicted RBP24.49■■□□□ 1.51
RAPGEF1-206ENST00000438647 ST14Q9Y5Y6 855 aa24.49■■□□□ 1.51
RAPGEF1-206ENST00000438647 DMXL2Q8TDJ6 3036 aa24.49■■□□□ 1.51
RAPGEF1-206ENST00000438647 C2orf81A6NN90 581 aa24.48■■□□□ 1.51
RAPGEF1-206ENST00000438647 NTN3O00634 580 aaPredicted RBP24.48■■□□□ 1.51
RAPGEF1-206ENST00000438647 ZW10O43264 779 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms