RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 DLDP09622 509 aaKnown RBP12.09□□□□□ -0.47
UBE3B-203ENST00000434735 HNRNPH2P55795 449 aaKnown RBP12.09□□□□□ -0.47
UBE3B-203ENST00000434735 PTPN20Q4JDL3 420 aa12.09□□□□□ -0.47
UBE3B-203ENST00000434735 N4BP2L1Q5TBK1 243 aaPredicted RBP12.09□□□□□ -0.47
UBE3B-203ENST00000434735 MAMDC4Q6UXC1 1216 aa12.09□□□□□ -0.47
UBE3B-203ENST00000434735 POLNQ7Z5Q5 900 aa12.09□□□□□ -0.47
UBE3B-203ENST00000434735 TMEM145Q8NBT3 493 aa12.09□□□□□ -0.47
UBE3B-203ENST00000434735 STARD8Q92502 1023 aa12.09□□□□□ -0.47
UBE3B-203ENST00000434735 GINS4Q9BRT9 223 aa12.09□□□□□ -0.47
UBE3B-203ENST00000434735 SERHL2Q9H4I8 314 aa12.09□□□□□ -0.47
UBE3B-203ENST00000434735 SERHLQ9NQF3 203 aa12.09□□□□□ -0.47
UBE3B-203ENST00000434735 CDC40O60508 579 aaKnown RBP eCLIP12.09□□□□□ -0.47
UBE3B-203ENST00000434735 MTX2O75431 263 aa12.09□□□□□ -0.47
UBE3B-203ENST00000434735 NOMO3P69849 1222 aa12.09□□□□□ -0.47
UBE3B-203ENST00000434735 SLC25A24Q6NUK1 477 aa12.09□□□□□ -0.47
UBE3B-203ENST00000434735 APTXQ7Z2E3 356 aaKnown RBP12.09□□□□□ -0.47
UBE3B-203ENST00000434735 ZBTB2Q8N680 514 aa12.09□□□□□ -0.47
UBE3B-203ENST00000434735 RMND5BQ96G75 393 aaPredicted RBP12.09□□□□□ -0.47
UBE3B-203ENST00000434735 TRIM13O60858 407 aa12.09□□□□□ -0.47
UBE3B-203ENST00000434735 ULK1O75385 1050 aa12.09□□□□□ -0.47
UBE3B-203ENST00000434735 KLHL18O94889 574 aa12.09□□□□□ -0.47
UBE3B-203ENST00000434735 LDLRAP1Q5SW96 308 aa12.09□□□□□ -0.47
UBE3B-203ENST00000434735 CCNYL2Q5T2Q4 361 aa12.09□□□□□ -0.47
UBE3B-203ENST00000434735 KIAA1211LQ6NV74 962 aa12.09□□□□□ -0.47
UBE3B-203ENST00000434735 SCIMPQ6UWF3 145 aa12.09□□□□□ -0.47
UBE3B-203ENST00000434735 CASP12Q6UXS9 341 aa12.09□□□□□ -0.47
UBE3B-203ENST00000434735 FAM126BQ8IXS8 530 aa12.09□□□□□ -0.47
UBE3B-203ENST00000434735 SRFBP1Q8NEF9 429 aaKnown RBP12.09□□□□□ -0.47
UBE3B-203ENST00000434735 OR5M3Q8NGP4 307 aa12.09□□□□□ -0.47
UBE3B-203ENST00000434735 BRSK1Q8TDC3 778 aa12.09□□□□□ -0.47
UBE3B-203ENST00000434735 FIG4Q92562 907 aa12.09□□□□□ -0.47
UBE3B-203ENST00000434735 RAD21L1Q9H4I0 556 aa12.09□□□□□ -0.47
UBE3B-203ENST00000434735 EPS8L2Q9H6S3 715 aa12.09□□□□□ -0.47
UBE3B-203ENST00000434735 C5orf60A6NFR6 353 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 RAD23AP54725 363 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 CACNG1Q06432 222 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 UNC5AQ6ZN44 842 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 SPATA6LQ8N4H0 392 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 METTL27Q8N6F8 245 aaPredicted RBP12.08□□□□□ -0.48
UBE3B-203ENST00000434735 PHC3Q8NDX5 983 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 FAR1Q8WVX9 515 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 PDE7BQ9NP56 450 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 FAM25AB3EWG3 89 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 FAM25CB3EWG5 89 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 FAM25GB3EWG6 89 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 LRATO95237 230 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 SEMA4FO95754 770 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 ITGBL1O95965 494 aaPredicted RBP12.08□□□□□ -0.48
UBE3B-203ENST00000434735 LTA4HP09960 611 aaKnown RBP12.08□□□□□ -0.48
UBE3B-203ENST00000434735 OTX2P32243 289 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 ZNF132P52740 706 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 DRG2P55039 364 aaKnown RBP12.08□□□□□ -0.48
UBE3B-203ENST00000434735 ARSHQ5FYA8 562 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 EMC10Q5UCC4 262 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 SH2D3CQ8N5H7 860 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 IGSF9Q9P2J2 1179 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 CCL22O00626 93 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 KLHL41O60662 606 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 RNGTTO60942 597 aaKnown RBP12.08□□□□□ -0.48
UBE3B-203ENST00000434735 CCR3P51677 355 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 NRG3P56975 720 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 TRAF2Q12933 501 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 LRRTM4Q86VH4 590 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 ZNF786Q8N393 782 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 GFM1Q96RP9 751 aaKnown RBP12.08□□□□□ -0.48
UBE3B-203ENST00000434735 ROGDIQ9GZN7 287 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 UBE2ZQ9H832 354 aaPredicted RBP12.08□□□□□ -0.48
UBE3B-203ENST00000434735 FZD3Q9NPG1 666 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 ENOPH1Q9UHY7 261 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 EIF2B4Q9UI10 523 aaKnown RBP12.08□□□□□ -0.48
UBE3B-203ENST00000434735 HPSEQ9Y251 543 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 TLR6Q9Y2C9 796 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 COL3A1P02461 1466 aaPredicted RBP12.08□□□□□ -0.48
UBE3B-203ENST00000434735 A0A087X1B8 175 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 UBDO15205 165 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 B3GALT2O43825 422 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 ZSCAN5DPP0CG00 497 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 MANFP55145 182 aaKnown RBP12.08□□□□□ -0.48
UBE3B-203ENST00000434735 CSNK2BP67870 215 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 TTC23Q5W5X9 447 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 NEK7Q8TDX7 302 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 OTUB2Q96DC9 234 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 SH3GL2Q99962 352 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 C16orf70Q9BSU1 422 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 TAPBPLQ9BX59 468 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 TMEM120AQ9BXJ8 343 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 SATB2Q9UPW6 733 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 LYVE1Q9Y5Y7 322 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 SQORQ9Y6N5 450 aa12.08□□□□□ -0.48
UBE3B-203ENST00000434735 H3BN98 237 aa12.07□□□□□ -0.48
UBE3B-203ENST00000434735 DUX1O43812 170 aa12.07□□□□□ -0.48
UBE3B-203ENST00000434735 EPN2O95208 641 aa12.07□□□□□ -0.48
UBE3B-203ENST00000434735 HEXBP07686 556 aa12.07□□□□□ -0.48
UBE3B-203ENST00000434735 TSPAN8P19075 237 aa12.07□□□□□ -0.48
UBE3B-203ENST00000434735 RXRGP48443 463 aa12.07□□□□□ -0.48
UBE3B-203ENST00000434735 CCNHP51946 323 aaPredicted RBP12.07□□□□□ -0.48
UBE3B-203ENST00000434735 TDGQ13569 410 aa12.07□□□□□ -0.48
UBE3B-203ENST00000434735 AGKQ53H12 422 aa12.07□□□□□ -0.48
UBE3B-203ENST00000434735 SLC4A11Q8NBS3 891 aa12.07□□□□□ -0.48
UBE3B-203ENST00000434735 ADAMTS15Q8TE58 950 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms