RNA–Protein interactions for RNA: ENST00000434476.6

SCRN1-207, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-207ENST00000434476 DNAJC15Q9Y5T4 150 aa13.13□□□□□ -0.31
SCRN1-207ENST00000434476 BBIP1A8MTZ0 92 aa13.12□□□□□ -0.31
SCRN1-207ENST00000434476 NRP2O60462 931 aa13.12□□□□□ -0.31
SCRN1-207ENST00000434476 EFCAB14O75071 495 aa13.12□□□□□ -0.31
SCRN1-207ENST00000434476 PGLSO95336 258 aa13.12□□□□□ -0.31
SCRN1-207ENST00000434476 MLYCDO95822 493 aa13.12□□□□□ -0.31
SCRN1-207ENST00000434476 RPS17P08708 135 aaKnown RBP13.12□□□□□ -0.31
SCRN1-207ENST00000434476 XRCC1P18887 633 aaPredicted RBP13.12□□□□□ -0.31
SCRN1-207ENST00000434476 EEF1DP29692 281 aaKnown RBP13.12□□□□□ -0.31
SCRN1-207ENST00000434476 HMGCLP35914 325 aa13.12□□□□□ -0.31
SCRN1-207ENST00000434476 CSKP41240 450 aa13.12□□□□□ -0.31
SCRN1-207ENST00000434476 MRPL19P49406 292 aaKnown RBP13.12□□□□□ -0.31
SCRN1-207ENST00000434476 ERFP50548 548 aa13.12□□□□□ -0.31
SCRN1-207ENST00000434476 CDH13P55290 713 aa13.12□□□□□ -0.31
SCRN1-207ENST00000434476 TRAP1Q12931 704 aaKnown RBP13.12□□□□□ -0.31
SCRN1-207ENST00000434476 GRIK2Q13002 908 aa13.12□□□□□ -0.31
SCRN1-207ENST00000434476 CDH18Q13634 790 aa13.12□□□□□ -0.31
SCRN1-207ENST00000434476 PPP1R3AQ16821 1122 aa13.12□□□□□ -0.31
SCRN1-207ENST00000434476 ZRANB3Q5FWF4 1079 aa13.12□□□□□ -0.31
SCRN1-207ENST00000434476 PSAPL1Q6NUJ1 521 aa13.12□□□□□ -0.31
SCRN1-207ENST00000434476 HTR3DQ70Z44 454 aa13.12□□□□□ -0.31
SCRN1-207ENST00000434476 PIANPQ8IYJ0 282 aa13.12□□□□□ -0.31
SCRN1-207ENST00000434476 PQLC1Q8N2U9 271 aa13.12□□□□□ -0.31
SCRN1-207ENST00000434476 CPXM2Q8N436 756 aa13.12□□□□□ -0.31
SCRN1-207ENST00000434476 EFHBQ8N7U6 833 aa13.12□□□□□ -0.31
SCRN1-207ENST00000434476 HMGCLL1Q8TB92 370 aa13.12□□□□□ -0.31
SCRN1-207ENST00000434476 GDPD5Q8WTR4 605 aa13.12□□□□□ -0.31
SCRN1-207ENST00000434476 GATA6Q92908 595 aa13.12□□□□□ -0.31
SCRN1-207ENST00000434476 EXT2Q93063 718 aa13.12□□□□□ -0.31
SCRN1-207ENST00000434476 FUBP1Q96AE4 644 aaKnown RBP13.12□□□□□ -0.31
SCRN1-207ENST00000434476 ROPN1LQ96C74 230 aa13.12□□□□□ -0.31
SCRN1-207ENST00000434476 VWCEQ96DN2 955 aa13.12□□□□□ -0.31
SCRN1-207ENST00000434476 CCT7Q99832 543 aa13.12□□□□□ -0.31
SCRN1-207ENST00000434476 RC3H2Q9HBD1 1191 aaKnown RBP13.12□□□□□ -0.31
SCRN1-207ENST00000434476 ZNF334Q9HCZ1 680 aaPredicted RBP13.12□□□□□ -0.31
SCRN1-207ENST00000434476 CACNA2D2Q9NY47 1150 aa13.12□□□□□ -0.31
SCRN1-207ENST00000434476 SUCOQ9UBS9 1254 aaKnown RBP13.12□□□□□ -0.31
SCRN1-207ENST00000434476 ZNF711Q9Y462 761 aa13.12□□□□□ -0.31
SCRN1-207ENST00000434476 PCDHGA7Q9Y5G6 932 aa13.12□□□□□ -0.31
SCRN1-207ENST00000434476 SLC30A1Q9Y6M5 507 aa13.12□□□□□ -0.31
SCRN1-207ENST00000434476 SCN5AQ14524 2016 aa13.12□□□□□ -0.31
SCRN1-207ENST00000434476 FBP2O00757 339 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 ACOT8O14734 319 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 LILRB3O75022 631 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 SIX3O95343 332 aaPredicted RBP13.11□□□□□ -0.31
SCRN1-207ENST00000434476 TSPAN12O95859 305 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 PFKLP17858 780 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 LBPP18428 481 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 TSPAN8P19075 237 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 GPX3P22352 226 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 PPM1AP35813 382 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 DPP6P42658 865 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 CDKN1CP49918 316 aaPredicted RBP13.11□□□□□ -0.31
SCRN1-207ENST00000434476 PKNOX1P55347 436 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 SLC7A9P82251 487 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 TSNQ15631 228 aaKnown RBP13.11□□□□□ -0.31
SCRN1-207ENST00000434476 MPPE1Q53F39 396 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 CTSL3PQ5NE16 218 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 OGFRL1Q5TC84 451 aaPredicted RBP13.11□□□□□ -0.31
SCRN1-207ENST00000434476 LYPLAL1Q5VWZ2 237 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 REP15Q6BDI9 236 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 SPATA19Q7Z5L4 167 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 GPSM1Q86YR5 675 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 ARL14EPQ8N8R7 260 aaPredicted RBP13.11□□□□□ -0.31
SCRN1-207ENST00000434476 PCYOX1LQ8NBM8 494 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 HIPK4Q8NE63 616 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 CATSPER1Q8NEC5 780 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 RIN3Q8TB24 985 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 MICAL1Q8TDZ2 1067 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 TRPC4APQ8TEL6 797 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 ZNF483Q8TF39 744 aaPredicted RBP13.11□□□□□ -0.31
SCRN1-207ENST00000434476 TSPEARQ8WU66 669 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 TWIST2Q8WVJ9 160 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 PIH1D2Q8WWB5 315 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 C3orf30Q96M34 536 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 SLC22A12Q96S37 553 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 GPR63Q9BZJ6 419 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 P2RY12Q9H244 342 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 SPATS2LQ9NUQ6 558 aaKnown RBP13.11□□□□□ -0.31
SCRN1-207ENST00000434476 TMEM39AQ9NV64 488 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 CCDC167Q9P0B6 97 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 EPS15L1Q9UBC2 864 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 SCOCQ9UIL1 159 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 NDUFAF1Q9Y375 327 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 DHRS7Q9Y394 339 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 PCDHB9Q9Y5E1 797 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 CPQQ9Y646 472 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 COL4A6Q14031 1691 aa13.11□□□□□ -0.31
SCRN1-207ENST00000434476 CDC7O00311 574 aa13.1□□□□□ -0.31
SCRN1-207ENST00000434476 BTN3A1O00481 513 aa13.1□□□□□ -0.31
SCRN1-207ENST00000434476 MRASO14807 208 aa13.1□□□□□ -0.31
SCRN1-207ENST00000434476 SOCS5O75159 536 aa13.1□□□□□ -0.31
SCRN1-207ENST00000434476 MATN4O95460 622 aa13.1□□□□□ -0.31
SCRN1-207ENST00000434476 RPS3P23396 243 aaKnown RBP eCLIP13.1□□□□□ -0.316e-6■■■□□ 17.9
SCRN1-207ENST00000434476 MNX1P50219 401 aaPredicted RBP13.1□□□□□ -0.31
SCRN1-207ENST00000434476 PTPN5P54829 565 aa13.1□□□□□ -0.31
SCRN1-207ENST00000434476 MS4A2Q01362 244 aa13.1□□□□□ -0.31
SCRN1-207ENST00000434476 TRIM25Q14258 630 aaKnown RBP13.1□□□□□ -0.31
SCRN1-207ENST00000434476 TXNDC8Q6A555 127 aa13.1□□□□□ -0.31
SCRN1-207ENST00000434476 C8orf82Q6P1X6 216 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms