RNA–Protein interactions for RNA: ENST00000430142.5

TOP3B-204, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-204ENST00000430142 CHKBQ9Y259 395 aa14.92□□□□□ -0.02
TOP3B-204ENST00000430142 OAS3Q9Y6K5 1087 aaKnown RBP14.92□□□□□ -0.02
TOP3B-204ENST00000430142 ZFC3H1O60293 1989 aaKnown RBP14.91□□□□□ -0.02
TOP3B-204ENST00000430142 LOC101059948A0A1B0GTJ6 334 aa14.91□□□□□ -0.02
TOP3B-204ENST00000430142 CAPN5O15484 640 aaPredicted RBP14.91□□□□□ -0.02
TOP3B-204ENST00000430142 DNAJC6O75061 913 aa14.91□□□□□ -0.02
TOP3B-204ENST00000430142 CLDN7O95471 211 aa14.91□□□□□ -0.02
TOP3B-204ENST00000430142 PYGLP06737 847 aa14.91□□□□□ -0.02
TOP3B-204ENST00000430142 PRKAR1AP10644 381 aa14.91□□□□□ -0.02
TOP3B-204ENST00000430142 UBASH3AP57075 661 aa14.91□□□□□ -0.02
TOP3B-204ENST00000430142 DSC2Q02487 901 aa14.91□□□□□ -0.02
TOP3B-204ENST00000430142 SLC25A11Q02978 314 aaKnown RBP14.91□□□□□ -0.02
TOP3B-204ENST00000430142 HHEXQ03014 270 aa14.91□□□□□ -0.02
TOP3B-204ENST00000430142 PIGHQ14442 188 aaPredicted RBP14.91□□□□□ -0.02
TOP3B-204ENST00000430142 KRT81Q14533 505 aa14.91□□□□□ -0.02
TOP3B-204ENST00000430142 IYDQ6PHW0 289 aa14.91□□□□□ -0.02
TOP3B-204ENST00000430142 TIPARPQ7Z3E1 657 aaKnown RBP14.91□□□□□ -0.02
TOP3B-204ENST00000430142 UNC5BQ8IZJ1 945 aa14.91□□□□□ -0.02
TOP3B-204ENST00000430142 NLGN4XQ8N0W4 816 aa14.91□□□□□ -0.02
TOP3B-204ENST00000430142 NLGN4YQ8NFZ3 816 aaPredicted RBP14.91□□□□□ -0.02
TOP3B-204ENST00000430142 TEKT4Q8WW24 435 aa14.91□□□□□ -0.02
TOP3B-204ENST00000430142 SLC45A3Q96JT2 553 aa14.91□□□□□ -0.02
TOP3B-204ENST00000430142 CATSPER2Q96P56 530 aa14.91□□□□□ -0.02
TOP3B-204ENST00000430142 TEFMQ96QE5 360 aaKnown RBP14.91□□□□□ -0.02
TOP3B-204ENST00000430142 POLR1EQ9GZS1 481 aaKnown RBP14.91□□□□□ -0.02
TOP3B-204ENST00000430142 EPN3Q9H201 632 aa14.91□□□□□ -0.02
TOP3B-204ENST00000430142 GPN2Q9H9Y4 310 aaPredicted RBP14.91□□□□□ -0.02
TOP3B-204ENST00000430142 APMAPQ9HDC9 416 aa14.91□□□□□ -0.02
TOP3B-204ENST00000430142 TUBD1Q9UJT1 453 aa14.91□□□□□ -0.02
TOP3B-204ENST00000430142 CNOT6Q9ULM6 557 aaKnown RBP14.91□□□□□ -0.02
TOP3B-204ENST00000430142 PRLP01236 227 aa14.9□□□□□ -0.02
TOP3B-204ENST00000430142 GYPCP04921 128 aa14.9□□□□□ -0.02
TOP3B-204ENST00000430142 CD48P09326 243 aa14.9□□□□□ -0.02
TOP3B-204ENST00000430142 MAP4P27816 1152 aaKnown RBP14.9□□□□□ -0.02
TOP3B-204ENST00000430142 MAPK9P45984 424 aa14.9□□□□□ -0.02
TOP3B-204ENST00000430142 CEACAM20Q6UY09 585 aa14.9□□□□□ -0.02
TOP3B-204ENST00000430142 LRRC49Q8IUZ0 686 aa14.9□□□□□ -0.02
TOP3B-204ENST00000430142 WDR24Q96S15 920 aa14.9□□□□□ -0.02
TOP3B-204ENST00000430142 SARS2Q9NP81 518 aaKnown RBP14.9□□□□□ -0.02
TOP3B-204ENST00000430142 ZNF71Q9NQZ8 489 aaPredicted RBP14.9□□□□□ -0.02
TOP3B-204ENST00000430142 FBXO8Q9NRD0 319 aa14.9□□□□□ -0.02
TOP3B-204ENST00000430142 RBM22Q9NW64 420 aaKnown RBP eCLIP14.9□□□□□ -0.021e-9■■■□□ 15.8
TOP3B-204ENST00000430142 VPS18Q9P253 973 aa14.9□□□□□ -0.02
TOP3B-204ENST00000430142 KLHL3Q9UH77 587 aa14.9□□□□□ -0.02
TOP3B-204ENST00000430142 CAPN11Q9UMQ6 739 aa14.9□□□□□ -0.02
TOP3B-204ENST00000430142 NENFQ9UMX5 172 aa14.9□□□□□ -0.02
TOP3B-204ENST00000430142 KCNK6Q9Y257 313 aa14.9□□□□□ -0.02
TOP3B-204ENST00000430142 PTPN13Q12923 2485 aa14.9□□□□□ -0.02
TOP3B-204ENST00000430142 COL12A1Q99715 3063 aa14.89□□□□□ -0.03
TOP3B-204ENST00000430142 MATN3O15232 486 aa14.89□□□□□ -0.03
TOP3B-204ENST00000430142 MFSD11O43934 449 aa14.89□□□□□ -0.03
TOP3B-204ENST00000430142 SNX2O60749 519 aa14.89□□□□□ -0.03
TOP3B-204ENST00000430142 GARSP41250 739 aaKnown RBP14.89□□□□□ -0.03
TOP3B-204ENST00000430142 ZBED6P86452 979 aa14.89□□□□□ -0.03
TOP3B-204ENST00000430142 GALNT2Q10471 571 aa14.89□□□□□ -0.03
TOP3B-204ENST00000430142 IGFBP7Q16270 282 aa14.89□□□□□ -0.03
TOP3B-204ENST00000430142 CCDC122Q5T0U0 273 aa14.89□□□□□ -0.03
TOP3B-204ENST00000430142 ALG1LQ6GMV1 187 aa14.89□□□□□ -0.03
TOP3B-204ENST00000430142 NIPA2Q8N8Q9 360 aa14.89□□□□□ -0.03
TOP3B-204ENST00000430142 ARRDC2Q8TBH0 407 aa14.89□□□□□ -0.03
TOP3B-204ENST00000430142 LRRN4Q8WUT4 740 aa14.89□□□□□ -0.03
TOP3B-204ENST00000430142 MAML1Q92585 1016 aa14.89□□□□□ -0.03
TOP3B-204ENST00000430142 KIAA1143Q96AT1 154 aaPredicted RBP14.89□□□□□ -0.03
TOP3B-204ENST00000430142 SH3KBP1Q96B97 665 aa14.89□□□□□ -0.03
TOP3B-204ENST00000430142 TDRD1Q9BXT4 1180 aaKnown RBP14.89□□□□□ -0.03
TOP3B-204ENST00000430142 THAP2Q9H0W7 228 aa14.89□□□□□ -0.03
TOP3B-204ENST00000430142 TTLL3Q9Y4R7 772 aa14.89□□□□□ -0.03
TOP3B-204ENST00000430142 A0A087X0T9 212 aa14.88□□□□□ -0.03
TOP3B-204ENST00000430142 A6NCN8 305 aa14.88□□□□□ -0.03
TOP3B-204ENST00000430142 FADS2P1A8MWK0 482 aa14.88□□□□□ -0.03
TOP3B-204ENST00000430142 STK17BO94768 372 aa14.88□□□□□ -0.03
TOP3B-204ENST00000430142 SERPING1P05155 500 aa14.88□□□□□ -0.03
TOP3B-204ENST00000430142 FAM228BP0C875 321 aa14.88□□□□□ -0.03
TOP3B-204ENST00000430142 ACP5P13686 325 aa14.88□□□□□ -0.03
TOP3B-204ENST00000430142 CES1P23141 567 aa14.88□□□□□ -0.03
TOP3B-204ENST00000430142 OAS2P29728 719 aaKnown RBP14.88□□□□□ -0.03
TOP3B-204ENST00000430142 CASRP41180 1078 aa14.88□□□□□ -0.03
TOP3B-204ENST00000430142 SSR1P43307 286 aaKnown RBP14.88□□□□□ -0.03
TOP3B-204ENST00000430142 NIPAL4Q0D2K0 466 aa14.88□□□□□ -0.03
TOP3B-204ENST00000430142 ABHD18Q0P651 414 aa14.88□□□□□ -0.03
TOP3B-204ENST00000430142 CDC20Q12834 499 aa14.88□□□□□ -0.03
TOP3B-204ENST00000430142 PAFAH1B3Q15102 231 aaKnown RBP14.88□□□□□ -0.03
TOP3B-204ENST00000430142 DEFB109BQ30KR1 87 aa14.88□□□□□ -0.03
TOP3B-204ENST00000430142 ATP13A4Q4VNC1 1196 aa14.88□□□□□ -0.03
TOP3B-204ENST00000430142 TDRD12Q587J7 1177 aaKnown RBP14.88□□□□□ -0.03
TOP3B-204ENST00000430142 NCBP2-AS2Q69YL0 99 aa14.88□□□□□ -0.03
TOP3B-204ENST00000430142 LYSMD3Q7Z3D4 306 aa14.88□□□□□ -0.03
TOP3B-204ENST00000430142 KDELC2Q7Z4H8 507 aa14.88□□□□□ -0.03
TOP3B-204ENST00000430142 SLC9B2Q86UD5 537 aa14.88□□□□□ -0.03
TOP3B-204ENST00000430142 LPCAT1Q8NF37 534 aa14.88□□□□□ -0.03
TOP3B-204ENST00000430142 C9orf43Q8TAL5 461 aaPredicted RBP14.88□□□□□ -0.03
TOP3B-204ENST00000430142 FAM71BQ8TC56 605 aa14.88□□□□□ -0.03
TOP3B-204ENST00000430142 ZPBPQ9BS86 351 aa14.88□□□□□ -0.03
TOP3B-204ENST00000430142 EFHD1Q9BUP0 239 aa14.88□□□□□ -0.03
TOP3B-204ENST00000430142 TBC1D10AQ9BXI6 508 aa14.88□□□□□ -0.03
TOP3B-204ENST00000430142 FAM83DQ9H4H8 585 aa14.88□□□□□ -0.03
TOP3B-204ENST00000430142 STN1Q9H668 368 aaKnown RBP14.88□□□□□ -0.03
TOP3B-204ENST00000430142 PCDH9Q9HC56 1237 aa14.88□□□□□ -0.03
TOP3B-204ENST00000430142 IFNKQ9P0W0 207 aa14.88□□□□□ -0.03
TOP3B-204ENST00000430142 RCOR3Q9P2K3 495 aaPredicted RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms