RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 CLCQ05315 142 aa13.61□□□□□ -0.23
THBS3-202ENST00000428962 TWF1Q12792 350 aa13.61□□□□□ -0.23
THBS3-202ENST00000428962 MED21Q13503 144 aa13.61□□□□□ -0.23
THBS3-202ENST00000428962 RAB33AQ14088 237 aa13.61□□□□□ -0.23
THBS3-202ENST00000428962 ADGRE1Q14246 886 aa13.61□□□□□ -0.23
THBS3-202ENST00000428962 LRRC36Q1X8D7 754 aa13.61□□□□□ -0.23
THBS3-202ENST00000428962 SFT2D3Q587I9 215 aa13.61□□□□□ -0.23
THBS3-202ENST00000428962 SAMD4BQ5PRF9 694 aaKnown RBP13.61□□□□□ -0.23
THBS3-202ENST00000428962 CNKSR3Q6P9H4 555 aa13.61□□□□□ -0.23
THBS3-202ENST00000428962 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.61□□□□□ -0.23
THBS3-202ENST00000428962 ANKRD33Q7Z3H0 272 aa13.61□□□□□ -0.23
THBS3-202ENST00000428962 ITIH5Q86UX2 942 aa13.61□□□□□ -0.23
THBS3-202ENST00000428962 SPNS2Q8IVW8 549 aa13.61□□□□□ -0.23
THBS3-202ENST00000428962 TTC30BQ8N4P2 665 aa13.61□□□□□ -0.23
THBS3-202ENST00000428962 DCAF4L2Q8NA75 395 aa13.61□□□□□ -0.23
THBS3-202ENST00000428962 PIP4K2CQ8TBX8 421 aa13.61□□□□□ -0.23
THBS3-202ENST00000428962 KCNJ9Q92806 393 aa13.61□□□□□ -0.23
THBS3-202ENST00000428962 C1QTNF3Q9BXJ4 246 aa13.61□□□□□ -0.23
THBS3-202ENST00000428962 EBF3Q9H4W6 596 aa13.61□□□□□ -0.23
THBS3-202ENST00000428962 Q9H521 79 aa13.61□□□□□ -0.23
THBS3-202ENST00000428962 MED16Q9Y2X0 877 aa13.61□□□□□ -0.23
THBS3-202ENST00000428962 NPEPPSL1A6NEC2 478 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 E5RI56 91 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 BTN3A1O00481 513 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 FBP2O00757 339 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 ACOT8O14734 319 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 GIPC1O14908 333 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 PIP5K1BO14986 540 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 KLK8O60259 260 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 SNAP91O60641 907 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 CHEK2O96017 543 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 ESR1P03372 595 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 LBPP18428 481 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 EN2P19622 333 aaPredicted RBP13.6□□□□□ -0.23
THBS3-202ENST00000428962 AQP4P55087 323 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 IL2P60568 153 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 TRAP1Q12931 704 aaKnown RBP13.6□□□□□ -0.23
THBS3-202ENST00000428962 CDH18Q13634 790 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 TRIM25Q14258 630 aaKnown RBP13.6□□□□□ -0.23
THBS3-202ENST00000428962 TSNQ15631 228 aaKnown RBP13.6□□□□□ -0.23
THBS3-202ENST00000428962 PABPC1LQ4VXU2 614 aaKnown RBP13.6□□□□□ -0.23
THBS3-202ENST00000428962 SETMARQ53H47 684 aaPredicted RBP13.6□□□□□ -0.23
THBS3-202ENST00000428962 PSAPL1Q6NUJ1 521 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 PRMT9Q6P2P2 845 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 LINGO4Q6UY18 593 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 CYHR1Q6ZMK1 362 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 SPATA24Q86W54 205 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 DDIASQ8IXT1 998 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 MIER2Q8N344 545 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 TRPC4APQ8TEL6 797 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 FUBP1Q96AE4 644 aaKnown RBP13.6□□□□□ -0.23
THBS3-202ENST00000428962 BIRC8Q96P09 236 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 CYP2S1Q96SQ9 504 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 AKTIPQ9H8T0 292 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 SMPD4Q9NXE4 827 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 CROTQ9UKG9 612 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 ATP6AP2A0A1C7CYW4 349 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 SNX2O60749 519 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 ATP6AP2O75787 350 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 CD160O95971 181 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 LYNP07948 512 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 GPX3P22352 226 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 MS4A2Q01362 244 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 CACNG1Q06432 222 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 MAP7D1Q3KQU3 841 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 CERS6Q6ZMG9 384 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 DNAJB7Q7Z6W7 309 aaPredicted RBP13.6□□□□□ -0.23
THBS3-202ENST00000428962 SLC39A11Q8N1S5 342 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 PCDH20Q8N6Y1 951 aaKnown RBP13.6□□□□□ -0.23
THBS3-202ENST00000428962 RNF148Q8N7C7 305 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 MYO19Q96H55 970 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 C3orf30Q96M34 536 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 FEM1AQ9BSK4 669 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 ZBED2Q9BTP6 218 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 PAK6Q9NQU5 681 aaPredicted RBP13.6□□□□□ -0.23
THBS3-202ENST00000428962 LSM7Q9UK45 103 aaKnown RBP13.6□□□□□ -0.23
THBS3-202ENST00000428962 NDUFAF1Q9Y375 327 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 ZNF711Q9Y462 761 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 PCDHB1Q9Y5F3 818 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 INSL5Q9Y5Q6 135 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 SLC30A1Q9Y6M5 507 aa13.6□□□□□ -0.23
THBS3-202ENST00000428962 CENPFP49454 3210 aa13.59□□□□□ -0.23
THBS3-202ENST00000428962 PLXNA4Q9HCM2 1894 aa13.59□□□□□ -0.23
THBS3-202ENST00000428962 E7ENX8 843 aa13.59□□□□□ -0.23
THBS3-202ENST00000428962 TRIM24O15164 1050 aa13.59□□□□□ -0.23
THBS3-202ENST00000428962 MT-CO1P00395 513 aa13.59□□□□□ -0.23
THBS3-202ENST00000428962 ALDOCP09972 364 aaKnown RBP13.59□□□□□ -0.23
THBS3-202ENST00000428962 LINGO3P0C6S8 592 aa13.59□□□□□ -0.23
THBS3-202ENST00000428962 UBTFL6P0CB48 400 aaPredicted RBP13.59□□□□□ -0.23
THBS3-202ENST00000428962 CCL5P13501 91 aa13.59□□□□□ -0.23
THBS3-202ENST00000428962 IDO1P14902 403 aa13.59□□□□□ -0.23
THBS3-202ENST00000428962 LAG3P18627 525 aa13.59□□□□□ -0.23
THBS3-202ENST00000428962 MZF1P28698 734 aaPredicted RBP13.59□□□□□ -0.23
THBS3-202ENST00000428962 MAPK8P45983 427 aa13.59□□□□□ -0.23
THBS3-202ENST00000428962 HSPA13P48723 471 aa13.59□□□□□ -0.23
THBS3-202ENST00000428962 CTSL3PQ5NE16 218 aa13.59□□□□□ -0.23
THBS3-202ENST00000428962 ARMC12Q5T9G4 340 aa13.59□□□□□ -0.23
THBS3-202ENST00000428962 RETSATQ6NUM9 610 aa13.59□□□□□ -0.23
THBS3-202ENST00000428962 TAS2R42Q7RTR8 314 aa13.59□□□□□ -0.23
THBS3-202ENST00000428962 SPATA19Q7Z5L4 167 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms