RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 ZNHIT6Q9NWK9 470 aaKnown RBP16.95■□□□□ 0.3
TRIM39-209ENST00000428728 PKD2L2Q9NZM6 624 aa16.95■□□□□ 0.3
TRIM39-209ENST00000428728 TMEM9Q9P0T7 183 aa16.95■□□□□ 0.3
TRIM39-209ENST00000428728 LCMT1Q9UIC8 334 aa16.95■□□□□ 0.3
TRIM39-209ENST00000428728 HGSO14964 777 aaPredicted RBP16.94■□□□□ 0.3
TRIM39-209ENST00000428728 DNAJC6O75061 913 aa16.94■□□□□ 0.3
TRIM39-209ENST00000428728 KRT1P04264 644 aa16.94■□□□□ 0.3
TRIM39-209ENST00000428728 ACP5P13686 325 aa16.94■□□□□ 0.3
TRIM39-209ENST00000428728 LIMK2P53671 638 aa16.94■□□□□ 0.3
TRIM39-209ENST00000428728 IFI35P80217 286 aaPredicted RBP16.94■□□□□ 0.3
TRIM39-209ENST00000428728 PPIDQ08752 370 aaKnown RBP16.94■□□□□ 0.3
TRIM39-209ENST00000428728 AP1B1Q10567 949 aa16.94■□□□□ 0.3
TRIM39-209ENST00000428728 LRP8Q14114 963 aa16.94■□□□□ 0.3
TRIM39-209ENST00000428728 TRIM14Q14142 442 aa16.94■□□□□ 0.3
TRIM39-209ENST00000428728 CLPPQ16740 277 aaPredicted RBP16.94■□□□□ 0.3
TRIM39-209ENST00000428728 TMEM164Q5U3C3 297 aa16.94■□□□□ 0.3
TRIM39-209ENST00000428728 NPNTQ6UXI9 565 aa16.94■□□□□ 0.3
TRIM39-209ENST00000428728 LYSMD3Q7Z3D4 306 aa16.94■□□□□ 0.3
TRIM39-209ENST00000428728 KDELC2Q7Z4H8 507 aa16.94■□□□□ 0.3
TRIM39-209ENST00000428728 NLRP8Q86W28 1048 aa16.94■□□□□ 0.3
TRIM39-209ENST00000428728 CNTD1Q8N815 330 aa16.94■□□□□ 0.3
TRIM39-209ENST00000428728 OR4D9Q8NGE8 314 aa16.94■□□□□ 0.3
TRIM39-209ENST00000428728 SLC35G2Q8TBE7 412 aa16.94■□□□□ 0.3
TRIM39-209ENST00000428728 CCHCR1Q8TD31 782 aa16.94■□□□□ 0.3
TRIM39-209ENST00000428728 LYSMD1Q96S90 227 aa16.94■□□□□ 0.3
TRIM39-209ENST00000428728 MLPHQ9BV36 600 aaPredicted RBP16.94■□□□□ 0.3
TRIM39-209ENST00000428728 BRD8Q9H0E9 1235 aa16.94■□□□□ 0.3
TRIM39-209ENST00000428728 VPS18Q9P253 973 aa16.94■□□□□ 0.3
TRIM39-209ENST00000428728 KCNK6Q9Y257 313 aa16.94■□□□□ 0.3
TRIM39-209ENST00000428728 PCDHB11Q9Y5F2 797 aa16.94■□□□□ 0.3
TRIM39-209ENST00000428728 SSU72P8A0A1W2PR75 194 aa16.93■□□□□ 0.3
TRIM39-209ENST00000428728 ANKRD66B4E2M5 251 aa16.93■□□□□ 0.3
TRIM39-209ENST00000428728 APOL1O14791 398 aa16.93■□□□□ 0.3
TRIM39-209ENST00000428728 CBFA2T2O43439 604 aa16.93■□□□□ 0.3
TRIM39-209ENST00000428728 PIRTP0C851 137 aa16.93■□□□□ 0.3
TRIM39-209ENST00000428728 TNNT1P13805 278 aa16.93■□□□□ 0.3
TRIM39-209ENST00000428728 PCSK7Q16549 785 aa16.93■□□□□ 0.3
TRIM39-209ENST00000428728 ALS2CLQ60I27 953 aa16.93■□□□□ 0.3
TRIM39-209ENST00000428728 B4GALNT4Q76KP1 1039 aa16.93■□□□□ 0.3
TRIM39-209ENST00000428728 ART4Q93070 314 aa16.93■□□□□ 0.3
TRIM39-209ENST00000428728 SGF29Q96ES7 293 aa16.93■□□□□ 0.3
TRIM39-209ENST00000428728 MED8Q96G25 268 aa16.93■□□□□ 0.3
TRIM39-209ENST00000428728 AHCYL2Q96HN2 611 aaKnown RBP16.93■□□□□ 0.3
TRIM39-209ENST00000428728 AGAP3Q96P47 875 aa16.93■□□□□ 0.3
TRIM39-209ENST00000428728 SLC38A3Q99624 504 aa16.93■□□□□ 0.3
TRIM39-209ENST00000428728 CHP1Q99653 195 aa16.93■□□□□ 0.3
TRIM39-209ENST00000428728 ADGRE3Q9BY15 652 aa16.93■□□□□ 0.3
TRIM39-209ENST00000428728 FAM83DQ9H4H8 585 aa16.93■□□□□ 0.3
TRIM39-209ENST00000428728 ARFGAP3Q9NP61 516 aa16.93■□□□□ 0.3
TRIM39-209ENST00000428728 ABHD10Q9NUJ1 306 aa16.93■□□□□ 0.3
TRIM39-209ENST00000428728 CNOT6Q9ULM6 557 aaKnown RBP16.93■□□□□ 0.3
TRIM39-209ENST00000428728 PCDHGA4Q9Y5G9 962 aa16.93■□□□□ 0.3
TRIM39-209ENST00000428728 C3orf70A6NLC5 250 aaPredicted RBP16.92■□□□□ 0.3
TRIM39-209ENST00000428728 DUX1O43812 170 aa16.92■□□□□ 0.3
TRIM39-209ENST00000428728 SNX2O60749 519 aa16.92■□□□□ 0.3
TRIM39-209ENST00000428728 TPM1P09493 284 aa16.92■□□□□ 0.3
TRIM39-209ENST00000428728 THRAP10827 490 aa16.92■□□□□ 0.3
TRIM39-209ENST00000428728 FGF3P11487 239 aaPredicted RBP16.92■□□□□ 0.3
TRIM39-209ENST00000428728 CD82P27701 267 aa16.92■□□□□ 0.3
TRIM39-209ENST00000428728 CSTF2P33240 577 aaKnown RBP eCLIP16.92■□□□□ 0.3
TRIM39-209ENST00000428728 FASLGP48023 281 aa16.92■□□□□ 0.3
TRIM39-209ENST00000428728 DYNLT1P63172 113 aa16.92■□□□□ 0.3
TRIM39-209ENST00000428728 GPLD1P80108 840 aa16.92■□□□□ 0.3
TRIM39-209ENST00000428728 HHEXQ03014 270 aa16.92■□□□□ 0.3
TRIM39-209ENST00000428728 NFATC2Q13469 925 aa16.92■□□□□ 0.3
TRIM39-209ENST00000428728 TRA2AQ13595 282 aaKnown RBP eCLIP16.92■□□□□ 0.3
TRIM39-209ENST00000428728 SNAP47Q5SQN1 464 aa16.92■□□□□ 0.3
TRIM39-209ENST00000428728 SLC9A4Q6AI14 798 aa16.92■□□□□ 0.3
TRIM39-209ENST00000428728 FAM129CQ86XR2 697 aa16.92■□□□□ 0.3
TRIM39-209ENST00000428728 RFX6Q8HWS3 928 aa16.92■□□□□ 0.3
TRIM39-209ENST00000428728 RAVER1Q8IY67 606 aaKnown RBP16.92■□□□□ 0.3
TRIM39-209ENST00000428728 SFRP1Q8N474 314 aa16.92■□□□□ 0.3
TRIM39-209ENST00000428728 AGBL5Q8NDL9 886 aa16.92■□□□□ 0.3
TRIM39-209ENST00000428728 EXTL1Q92935 676 aa16.92■□□□□ 0.3
TRIM39-209ENST00000428728 SPATA16Q9BXB7 569 aa16.92■□□□□ 0.3
TRIM39-209ENST00000428728 MAK16Q9BXY0 300 aaKnown RBP16.92■□□□□ 0.3
TRIM39-209ENST00000428728 TBC1D29Q9UFV1 150 aa16.92■□□□□ 0.3
TRIM39-209ENST00000428728 SHOC2Q9UQ13 582 aa16.92■□□□□ 0.3
TRIM39-209ENST00000428728 HYOU1Q9Y4L1 999 aa16.92■□□□□ 0.3
TRIM39-209ENST00000428728 ZNF462Q96JM2 2506 aa16.92■□□□□ 0.3
TRIM39-209ENST00000428728 ZNF487B1APH4 448 aa16.91■□□□□ 0.3
TRIM39-209ENST00000428728 STMND1H3BQB6 276 aa16.91■□□□□ 0.3
TRIM39-209ENST00000428728 PPP1R12AO14974 1030 aaPredicted RBP16.91■□□□□ 0.3
TRIM39-209ENST00000428728 MFAP3LO75121 409 aa16.91■□□□□ 0.3
TRIM39-209ENST00000428728 WT1P19544 449 aaPredicted RBP16.91■□□□□ 0.3
TRIM39-209ENST00000428728 PTMSP20962 102 aa16.91■□□□□ 0.3
TRIM39-209ENST00000428728 MAPK9P45984 424 aa16.91■□□□□ 0.3
TRIM39-209ENST00000428728 ODF2Q5BJF6 829 aa16.91■□□□□ 0.3
TRIM39-209ENST00000428728 ZNF569Q5MCW4 686 aa16.91■□□□□ 0.3
TRIM39-209ENST00000428728 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.91■□□□□ 0.3
TRIM39-209ENST00000428728 ZNF648Q5T619 568 aaPredicted RBP16.91■□□□□ 0.3
TRIM39-209ENST00000428728 NT5DC3Q86UY8 548 aa16.91■□□□□ 0.3
TRIM39-209ENST00000428728 DTX1Q86Y01 620 aa16.91■□□□□ 0.3
TRIM39-209ENST00000428728 RHOT2Q8IXI1 618 aa16.91■□□□□ 0.3
TRIM39-209ENST00000428728 CCDC112Q8NEF3 446 aa16.91■□□□□ 0.3
TRIM39-209ENST00000428728 OR10G6Q8NH81 332 aa16.91■□□□□ 0.3
TRIM39-209ENST00000428728 RNF25Q96BH1 459 aaPredicted RBP16.91■□□□□ 0.3
TRIM39-209ENST00000428728 TAAR9Q96RI9 348 aa16.91■□□□□ 0.3
TRIM39-209ENST00000428728 DPYSL5Q9BPU6 564 aa16.91■□□□□ 0.3
TRIM39-209ENST00000428728 STN1Q9H668 368 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms