RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 PPP1R10Q96QC0 940 aaKnown RBP5.19□□□□□ -1.58
LINC00458-202ENST00000427299 PIGSQ96S52 555 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 PLIN2Q99541 437 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 LRRC1Q9BTT6 524 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 MMTAG2Q9BU76 263 aaKnown RBP5.19□□□□□ -1.58
LINC00458-202ENST00000427299 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.19□□□□□ -1.58
LINC00458-202ENST00000427299 GANQ9H2C0 597 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 GGA3Q9NZ52 723 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 SEL1LQ9UBV2 794 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 ARMCX3Q9UH62 379 aaPredicted RBP5.19□□□□□ -1.58
LINC00458-202ENST00000427299 TRAF3IP3Q9Y228 551 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 UTP11Q9Y3A2 253 aaKnown RBP5.19□□□□□ -1.58
LINC00458-202ENST00000427299 LTBP4Q8N2S1 1624 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 PARP14Q460N5 1801 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 SSC5DA1L4H1 1573 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 IGKV6D-41A0A0C4DH26 115 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 IGLV5-39A0A0G2JS06 123 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 EME2A4GXA9 379 aaPredicted RBP5.18□□□□□ -1.58
LINC00458-202ENST00000427299 C4orf47A7E2U8 309 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 TMCO5BA8MYB1 307 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 B9A039 149 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 PDXKO00764 312 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 IRAK2O43187 625 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 BUB1O43683 1085 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 SLC37A4O43826 429 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 TDP2O95551 362 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 GGPS1O95749 300 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 CD4P01730 458 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 TFRCP02786 760 aaKnown RBP5.18□□□□□ -1.58
LINC00458-202ENST00000427299 PLEKP08567 350 aaPredicted RBP5.18□□□□□ -1.58
LINC00458-202ENST00000427299 PAEPP09466 180 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 PLA2G4BP0C869 781 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 GOLGA8HP0CJ92 632 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 CAPN3P20807 821 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 ATP5DP30049 168 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 CTNNA1P35221 906 aaKnown RBP5.18□□□□□ -1.58
LINC00458-202ENST00000427299 MATR3P43243 847 aaKnown RBP eCLIP5.18□□□□□ -1.58
LINC00458-202ENST00000427299 AP2B1P63010 937 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 B4GALNT1Q00973 533 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 ALCAMQ13740 583 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 DHX34Q14147 1143 aaKnown RBP5.18□□□□□ -1.58
LINC00458-202ENST00000427299 EFR3AQ14156 821 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 TAF12Q16514 161 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 PTGISQ16647 500 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 AASDHQ4L235 1098 aaPredicted RBP5.18□□□□□ -1.58
LINC00458-202ENST00000427299 TTMPQ5BVD1 217 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 SEL1L2Q5TEA6 688 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 NAA35Q5VZE5 725 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 GRHL2Q6ISB3 625 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 MZT2BQ6NZ67 158 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 KLHL17Q6TDP4 642 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 Q6ZTC4 211 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 CCDC121Q6ZUS5 278 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 PEX26Q7Z412 305 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 RPAINQ86UA6 219 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 HERC6Q8IVU3 1022 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 OTUD6BQ8N6M0 293 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 C11orf44Q8N8P7 122 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 FAM133AQ8N9E0 248 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 SLC44A5Q8NCS7 719 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 NEK9Q8TD19 979 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 LRRC15Q8TF66 581 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 CTNNBL1Q8WYA6 563 aaPredicted RBP5.18□□□□□ -1.58
LINC00458-202ENST00000427299 RFFLQ8WZ73 363 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 SDCCAG3Q96C92 435 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 DNAJC19Q96DA6 116 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 RBM17Q96I25 401 aaKnown RBP5.18□□□□□ -1.58
LINC00458-202ENST00000427299 KRT12Q99456 494 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 TWSG1Q9GZX9 223 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 CARD9Q9H257 536 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 TAOK3Q9H2K8 898 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 UNC45AQ9H3U1 944 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 EPB41L5Q9HCM4 733 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 KCNMB3Q9NPA1 279 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 OLFML3Q9NRN5 406 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 VPS45Q9NRW7 570 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 CLIC5Q9NZA1 410 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 KCND2Q9NZV8 630 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 GCNT4Q9P109 453 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 SUCLA2Q9P2R7 463 aaPredicted RBP5.18□□□□□ -1.58
LINC00458-202ENST00000427299 NKX1-2Q9UD57 310 aaPredicted RBP5.18□□□□□ -1.58
LINC00458-202ENST00000427299 MTRF1LQ9UGC7 380 aaKnown RBP5.18□□□□□ -1.58
LINC00458-202ENST00000427299 NFU1Q9UMS0 254 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 DAPP1Q9UN19 280 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 PCDHA12Q9UN75 941 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 RABGAP1Q9Y3P9 1069 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 LOC285556D6RIA3 1793 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 FRMPD4Q14CM0 1322 aa5.18□□□□□ -1.58
LINC00458-202ENST00000427299 CYP3A7-CYP3A51PA0A087WV96 503 aa5.17□□□□□ -1.58
LINC00458-202ENST00000427299 MIF4GDA9UHW6 222 aaKnown RBP5.17□□□□□ -1.58
LINC00458-202ENST00000427299 EPHB6O15197 1021 aa5.17□□□□□ -1.58
LINC00458-202ENST00000427299 RAD51CO43502 376 aa5.17□□□□□ -1.58
LINC00458-202ENST00000427299 FTCDO95954 541 aa5.17□□□□□ -1.58
LINC00458-202ENST00000427299 H2AFZP0C0S5 128 aa5.17□□□□□ -1.58
LINC00458-202ENST00000427299 CKMT1AP12532 417 aa5.17□□□□□ -1.58
LINC00458-202ENST00000427299 UCHL3P15374 230 aa5.17□□□□□ -1.58
LINC00458-202ENST00000427299 CYP3A7P24462 503 aa5.17□□□□□ -1.58
LINC00458-202ENST00000427299 MT3P25713 68 aa5.17□□□□□ -1.58
LINC00458-202ENST00000427299 TACR3P29371 465 aa5.17□□□□□ -1.58
LINC00458-202ENST00000427299 RFC4P35249 363 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms