RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 PCDHB1Q9Y5F3 818 aa13.53□□□□□ -0.24
SNX3-204ENST00000426155 TRABD2BA6NFA1 517 aa13.52□□□□□ -0.25
SNX3-204ENST00000426155 NOBOXO60393 691 aa13.52□□□□□ -0.25
SNX3-204ENST00000426155 MT-CO3P00414 261 aa13.52□□□□□ -0.25
SNX3-204ENST00000426155 GP1BAP07359 652 aa13.52□□□□□ -0.25
SNX3-204ENST00000426155 IVLP07476 585 aa13.52□□□□□ -0.25
SNX3-204ENST00000426155 ADCY8P40145 1251 aa13.52□□□□□ -0.25
SNX3-204ENST00000426155 DUSP3P51452 185 aaPredicted RBP13.52□□□□□ -0.25
SNX3-204ENST00000426155 GEMP55040 296 aa13.52□□□□□ -0.25
SNX3-204ENST00000426155 MAZP56270 477 aaKnown RBP13.52□□□□□ -0.25
SNX3-204ENST00000426155 CTBSQ01459 385 aa13.52□□□□□ -0.25
SNX3-204ENST00000426155 SPARCL1Q14515 664 aa13.52□□□□□ -0.25
SNX3-204ENST00000426155 KCTD19Q17RG1 926 aaPredicted RBP13.52□□□□□ -0.25
SNX3-204ENST00000426155 MICALCLQ6ZW33 695 aa13.52□□□□□ -0.25
SNX3-204ENST00000426155 GLT6D1Q7Z4J2 308 aa13.52□□□□□ -0.25
SNX3-204ENST00000426155 NLRP8Q86W28 1048 aa13.52□□□□□ -0.25
SNX3-204ENST00000426155 SLC35B2Q8TB61 432 aa13.52□□□□□ -0.25
SNX3-204ENST00000426155 GPBAR1Q8TDU6 330 aa13.52□□□□□ -0.25
SNX3-204ENST00000426155 SCG3Q8WXD2 468 aaKnown RBP13.52□□□□□ -0.25
SNX3-204ENST00000426155 GLMNQ92990 594 aa13.52□□□□□ -0.25
SNX3-204ENST00000426155 CCDC74AQ96AQ1 378 aa13.52□□□□□ -0.25
SNX3-204ENST00000426155 OR2M4Q96R27 311 aa13.52□□□□□ -0.25
SNX3-204ENST00000426155 CCDC3Q9BQI4 270 aa13.52□□□□□ -0.25
SNX3-204ENST00000426155 DPEP2Q9H4A9 486 aa13.52□□□□□ -0.25
SNX3-204ENST00000426155 ZMIZ1Q9ULJ6 1067 aa13.52□□□□□ -0.25
SNX3-204ENST00000426155 CLCA2Q9UQC9 943 aa13.52□□□□□ -0.25
SNX3-204ENST00000426155 ZFHX4Q86UP3 3567 aa13.52□□□□□ -0.25
SNX3-204ENST00000426155 LAMA5O15230 3695 aa13.52□□□□□ -0.25
SNX3-204ENST00000426155 DNAJC6O75061 913 aa13.51□□□□□ -0.25
SNX3-204ENST00000426155 MTX2O75431 263 aa13.51□□□□□ -0.25
SNX3-204ENST00000426155 ANXA9O76027 345 aa13.51□□□□□ -0.25
SNX3-204ENST00000426155 STK10O94804 968 aaKnown RBP13.51□□□□□ -0.25
SNX3-204ENST00000426155 METTL18O95568 372 aa13.51□□□□□ -0.25
SNX3-204ENST00000426155 CAPNS1P04632 268 aa13.51□□□□□ -0.25
SNX3-204ENST00000426155 FGF1P05230 155 aa13.51□□□□□ -0.25
SNX3-204ENST00000426155 PYGLP06737 847 aa13.51□□□□□ -0.25
SNX3-204ENST00000426155 HLA-DPA1P20036 260 aa13.51□□□□□ -0.25
SNX3-204ENST00000426155 CA5AP35218 305 aa13.51□□□□□ -0.25
SNX3-204ENST00000426155 ADRA1AP35348 466 aa13.51□□□□□ -0.25
SNX3-204ENST00000426155 TNNT3P45378 269 aaPredicted RBP13.51□□□□□ -0.25
SNX3-204ENST00000426155 RPIAP49247 311 aa13.51□□□□□ -0.25
SNX3-204ENST00000426155 DCDC1P59894 354 aa13.51□□□□□ -0.25
SNX3-204ENST00000426155 E2F1Q01094 437 aa13.51□□□□□ -0.25
SNX3-204ENST00000426155 ILF3Q12906 894 aaKnown RBP eCLIP13.51□□□□□ -0.25
SNX3-204ENST00000426155 RPS6KA1Q15418 735 aa13.51□□□□□ -0.25
SNX3-204ENST00000426155 PYCR3Q53H96 274 aa13.51□□□□□ -0.25
SNX3-204ENST00000426155 ZNF569Q5MCW4 686 aa13.51□□□□□ -0.25
SNX3-204ENST00000426155 CDCP2Q5VXM1 449 aa13.51□□□□□ -0.25
SNX3-204ENST00000426155 LVRNQ6Q4G3 990 aa13.51□□□□□ -0.25
SNX3-204ENST00000426155 ZNF662Q6ZS27 426 aa13.51□□□□□ -0.25
SNX3-204ENST00000426155 PRUNE1Q86TP1 453 aa13.51□□□□□ -0.25
SNX3-204ENST00000426155 SLC13A5Q86YT5 568 aaPredicted RBP13.51□□□□□ -0.25
SNX3-204ENST00000426155 RAVER1Q8IY67 606 aaKnown RBP13.51□□□□□ -0.25
SNX3-204ENST00000426155 TTC13Q8NBP0 860 aa13.51□□□□□ -0.25
SNX3-204ENST00000426155 GPR156Q8NFN8 814 aa13.51□□□□□ -0.25
SNX3-204ENST00000426155 C1orf54Q8WWF1 131 aa13.51□□□□□ -0.25
SNX3-204ENST00000426155 SCARF2Q96GP6 870 aaPredicted RBP13.51□□□□□ -0.25
SNX3-204ENST00000426155 ALS2CR12Q96Q35 445 aa13.51□□□□□ -0.25
SNX3-204ENST00000426155 FERMT1Q9BQL6 677 aa13.51□□□□□ -0.25
SNX3-204ENST00000426155 GSDMCQ9BYG8 508 aa13.51□□□□□ -0.25
SNX3-204ENST00000426155 ABCG4Q9H172 646 aa13.51□□□□□ -0.25
SNX3-204ENST00000426155 KCNF1Q9H3M0 494 aa13.51□□□□□ -0.25
SNX3-204ENST00000426155 EVA1BQ9NVM1 165 aa13.51□□□□□ -0.25
SNX3-204ENST00000426155 TRNAU1APQ9NX07 287 aaKnown RBP13.51□□□□□ -0.25
SNX3-204ENST00000426155 NCKIPSDQ9NZQ3 722 aa13.51□□□□□ -0.25
SNX3-204ENST00000426155 TAAR2Q9P1P5 351 aa13.51□□□□□ -0.25
SNX3-204ENST00000426155 TMPRSS11EQ9UL52 423 aa13.51□□□□□ -0.25
SNX3-204ENST00000426155 KNTC1P50748 2209 aa13.51□□□□□ -0.25
SNX3-204ENST00000426155 RGSL1A5PLK6 1076 aa13.5□□□□□ -0.25
SNX3-204ENST00000426155 C5orf60A6NFR6 353 aa13.5□□□□□ -0.25
SNX3-204ENST00000426155 TAF4O00268 1085 aa13.5□□□□□ -0.25
SNX3-204ENST00000426155 EML2O95834 649 aa13.5□□□□□ -0.25
SNX3-204ENST00000426155 EPOP01588 193 aa13.5□□□□□ -0.25
SNX3-204ENST00000426155 CDK4P11802 303 aa13.5□□□□□ -0.25
SNX3-204ENST00000426155 HMGCLP35914 325 aa13.5□□□□□ -0.25
SNX3-204ENST00000426155 ACTR1BP42025 376 aa13.5□□□□□ -0.25
SNX3-204ENST00000426155 ACTR1AP61163 376 aa13.5□□□□□ -0.25
SNX3-204ENST00000426155 PLA2G4EQ3MJ16 856 aa13.5□□□□□ -0.25
SNX3-204ENST00000426155 ATP13A5Q4VNC0 1218 aa13.5□□□□□ -0.25
SNX3-204ENST00000426155 KHDC1Q4VXA5 237 aaKnown RBP13.5□□□□□ -0.25
SNX3-204ENST00000426155 ARHGEF18Q6ZSZ5 1173 aa13.5□□□□□ -0.25
SNX3-204ENST00000426155 CHST15Q7LFX5 561 aaPredicted RBP13.5□□□□□ -0.25
SNX3-204ENST00000426155 GALNT13Q8IUC8 556 aa13.5□□□□□ -0.25
SNX3-204ENST00000426155 SDR16C5Q8N3Y7 309 aa13.5□□□□□ -0.25
SNX3-204ENST00000426155 TRAM1L1Q8N609 369 aa13.5□□□□□ -0.25
SNX3-204ENST00000426155 DCBLD1Q8N8Z6 715 aa13.5□□□□□ -0.25
SNX3-204ENST00000426155 KDF1Q8NAX2 398 aaPredicted RBP13.5□□□□□ -0.25
SNX3-204ENST00000426155 ZSCAN5AQ9BUG6 496 aa13.5□□□□□ -0.25
SNX3-204ENST00000426155 TLR10Q9BXR5 811 aa13.5□□□□□ -0.25
SNX3-204ENST00000426155 CDH19Q9H159 772 aa13.5□□□□□ -0.25
SNX3-204ENST00000426155 OR2AG1Q9H205 316 aa13.5□□□□□ -0.25
SNX3-204ENST00000426155 PIH1D1Q9NWS0 290 aaKnown RBP13.5□□□□□ -0.25
SNX3-204ENST00000426155 IL17CQ9P0M4 197 aa13.5□□□□□ -0.25
SNX3-204ENST00000426155 ATXN10Q9UBB4 475 aa13.5□□□□□ -0.25
SNX3-204ENST00000426155 NFKBIL1Q9UBC1 381 aaPredicted RBP13.5□□□□□ -0.25
SNX3-204ENST00000426155 KCTD3Q9Y597 815 aa13.5□□□□□ -0.25
SNX3-204ENST00000426155 ARL5AQ9Y689 179 aa13.5□□□□□ -0.25
SNX3-204ENST00000426155 RNF215Q9Y6U7 377 aa13.5□□□□□ -0.25
SNX3-204ENST00000426155 APC2O95996 2303 aa13.5□□□□□ -0.25
SNX3-204ENST00000426155 ANKRD11Q6UB99 2663 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms