RNA–Protein interactions for RNA: ENST00000425804.1

R3HDM1-205, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-205ENST00000425804 RCAN1P53805 252 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 SCN1BQ07699 218 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 ACTN3Q08043 901 aaPredicted RBP2.56□□□□□ -2
R3HDM1-205ENST00000425804 KLHL30Q0D2K2 578 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 TBL3Q12788 808 aaKnown RBP2.56□□□□□ -2
R3HDM1-205ENST00000425804 PTP4A2Q12974 167 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 GPS1Q13098 491 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 IFT88Q13099 833 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 TNFAIP1Q13829 316 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 LASP1Q14847 261 aaKnown RBP2.56□□□□□ -2
R3HDM1-205ENST00000425804 NAA25Q14CX7 972 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 PGM5Q15124 567 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 OASLQ15646 514 aaKnown RBP2.56□□□□□ -2
R3HDM1-205ENST00000425804 BTBD16Q32M84 506 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 TOR1AIP1Q5JTV8 583 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 C9orf152Q5JTZ5 239 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 LIPMQ5VYY2 423 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 RAP1GAP2Q684P5 730 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 DGAT2L7PQ6IED9 249 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 RINT1Q6NUQ1 792 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 ZER1Q7Z7L7 766 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 NBPF5PQ86XG9 351 aaPredicted RBP2.56□□□□□ -2
R3HDM1-205ENST00000425804 DNAAF5Q86Y56 855 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 EGFL6Q8IUX8 553 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 WDR63Q8IWG1 891 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 ADGRF2Q8IZF7 708 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 WDTC1Q8N5D0 677 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 FRMD1Q8N878 549 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 ANKRD44Q8N8A2 993 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 TDRD5Q8NAT2 981 aaKnown RBP2.56□□□□□ -2
R3HDM1-205ENST00000425804 Q8NFD4 153 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 IPMKQ8NFU5 416 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 CTCFLQ8NI51 663 aaPredicted RBP2.56□□□□□ -2
R3HDM1-205ENST00000425804 SPATA20Q8TB22 786 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 SETD6Q8TBK2 473 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 BRSK1Q8TDC3 778 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 NOC3LQ8WTT2 800 aaKnown RBP2.56□□□□□ -2
R3HDM1-205ENST00000425804 POMGNT1Q8WZA1 660 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 SAAL1Q96ER3 474 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 INPP4AQ96PE3 977 aaPredicted RBP2.56□□□□□ -2
R3HDM1-205ENST00000425804 LBHD1Q9BQE6 289 aaPredicted RBP2.56□□□□□ -2
R3HDM1-205ENST00000425804 PIMREGQ9BSJ6 248 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 SF3B5Q9BWJ5 86 aaKnown RBP2.56□□□□□ -2
R3HDM1-205ENST00000425804 TEX13BQ9BXU2 312 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 USP44Q9H0E7 712 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 NT5C3AQ9H0P0 336 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 ZBTB26Q9HCK0 441 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 MID1IP1Q9NPA3 183 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 PAPOLBQ9NRJ5 636 aaKnown RBP2.56□□□□□ -2
R3HDM1-205ENST00000425804 SIRT3Q9NTG7 399 aaPredicted RBP2.56□□□□□ -2
R3HDM1-205ENST00000425804 GIMAP4Q9NUV9 329 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 MCM9Q9NXL9 1143 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 EHD2Q9NZN4 543 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 AKAP7Q9P0M2 348 aaPredicted RBP2.56□□□□□ -2
R3HDM1-205ENST00000425804 C5AR2Q9P296 337 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 LIMA1Q9UHB6 759 aaKnown RBP2.56□□□□□ -2
R3HDM1-205ENST00000425804 CORO1CQ9ULV4 474 aaPredicted RBP2.56□□□□□ -2
R3HDM1-205ENST00000425804 NFU1Q9UMS0 254 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 SUFUQ9UMX1 484 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 PCDHA12Q9UN75 941 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 GDAQ9Y2T3 454 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 POMT1Q9Y6A1 747 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 KIF7Q2M1P5 1343 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 KDM3AQ9Y4C1 1321 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 NSD2O96028 1365 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 ABCC11Q96J66 1382 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 NPHP4O75161 1426 aaPredicted RBP2.56□□□□□ -2
R3HDM1-205ENST00000425804 MED14O60244 1454 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 NKTRP30414 1462 aaKnown RBP2.56□□□□□ -2
R3HDM1-205ENST00000425804 NWD1Q149M9 1564 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 USP32Q8NFA0 1604 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 ROBO1Q9Y6N7 1651 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 XRN1Q8IZH2 1706 aaKnown RBP2.56□□□□□ -2
R3HDM1-205ENST00000425804 DOCK7Q96N67 2140 aa2.56□□□□□ -2
R3HDM1-205ENST00000425804 IGKV3D-20A0A0C4DH25 116 aa2.55□□□□□ -2
R3HDM1-205ENST00000425804 PSMD14O00487 310 aa2.55□□□□□ -2
R3HDM1-205ENST00000425804 BCAT2O15382 392 aaPredicted RBP2.55□□□□□ -2
R3HDM1-205ENST00000425804 ZBTB43O43298 467 aa2.55□□□□□ -2
R3HDM1-205ENST00000425804 HNRNPRO43390 633 aaKnown RBP2.55□□□□□ -2
R3HDM1-205ENST00000425804 KIF5CO60282 957 aa2.55□□□□□ -2
R3HDM1-205ENST00000425804 CCNT2O60583 730 aaKnown RBP2.55□□□□□ -2
R3HDM1-205ENST00000425804 KINO60870 393 aaKnown RBP2.55□□□□□ -2
R3HDM1-205ENST00000425804 TSC22D2O75157 780 aa2.55□□□□□ -2
R3HDM1-205ENST00000425804 PPP6R2O75170 966 aa2.55□□□□□ -2
R3HDM1-205ENST00000425804 ENTPD3O75355 529 aa2.55□□□□□ -2
R3HDM1-205ENST00000425804 LRP6O75581 1613 aa2.55□□□□□ -2
R3HDM1-205ENST00000425804 SEC14L2O76054 403 aa2.55□□□□□ -2
R3HDM1-205ENST00000425804 SNX4O95219 450 aa2.55□□□□□ -2
R3HDM1-205ENST00000425804 VIPP01282 170 aa2.55□□□□□ -2
R3HDM1-205ENST00000425804 OPN1MWP04001 364 aa2.55□□□□□ -2
R3HDM1-205ENST00000425804 SP1P08047 785 aa2.55□□□□□ -2
R3HDM1-205ENST00000425804 OPN1MW2P0DN77 364 aa2.55□□□□□ -2
R3HDM1-205ENST00000425804 OPN1MW3P0DN78 364 aa2.55□□□□□ -2
R3HDM1-205ENST00000425804 CHRNB1P11230 501 aa2.55□□□□□ -2
R3HDM1-205ENST00000425804 PEPDP12955 493 aa2.55□□□□□ -2
R3HDM1-205ENST00000425804 FDPSP14324 419 aaKnown RBP2.55□□□□□ -2
R3HDM1-205ENST00000425804 GM2AP17900 193 aa2.55□□□□□ -2
R3HDM1-205ENST00000425804 PTAFRP25105 342 aa2.55□□□□□ -2
R3HDM1-205ENST00000425804 KLRK1P26718 216 aa2.55□□□□□ -2
R3HDM1-205ENST00000425804 DUSP1P28562 367 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms