RNA–Protein interactions for RNA: ENST00000425393.1

RAB3GAP1-202, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2 BASIC

Gene RAB3GAP1, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-202ENST00000425393 DUX5Q96PT3 197 aa4.85□□□□□ -1.63
RAB3GAP1-202ENST00000425393 NDST4Q9H3R1 872 aa4.85□□□□□ -1.63
RAB3GAP1-202ENST00000425393 MAGIXQ9H6Y5 334 aa4.85□□□□□ -1.63
RAB3GAP1-202ENST00000425393 SETD4Q9NVD3 440 aa4.85□□□□□ -1.63
RAB3GAP1-202ENST00000425393 C1RLQ9NZP8 487 aa4.85□□□□□ -1.63
RAB3GAP1-202ENST00000425393 UBA2Q9UBT2 640 aaPredicted RBP4.85□□□□□ -1.63
RAB3GAP1-202ENST00000425393 FBXO2Q9UK22 296 aaPredicted RBP4.85□□□□□ -1.63
RAB3GAP1-202ENST00000425393 VPS28Q9UK41 221 aa4.85□□□□□ -1.63
RAB3GAP1-202ENST00000425393 CLIC4Q9Y696 253 aa4.85□□□□□ -1.63
RAB3GAP1-202ENST00000425393 ARHGEF40Q8TER5 1519 aa4.85□□□□□ -1.63
RAB3GAP1-202ENST00000425393 WDR81Q562E7 1941 aa4.85□□□□□ -1.63
RAB3GAP1-202ENST00000425393 RSF1Q96T23 1441 aaPredicted RBP4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 ATXN2Q99700 1313 aaKnown RBP4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 LINC01553A4QN01 128 aa4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 GOLGA6L9A6NEM1 432 aa4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 AKR1B15C9JRZ8 316 aaPredicted RBP4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 PTGES3LE9PB15 166 aa4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 RFPL2O75678 378 aa4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 GFPT2O94808 682 aa4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 ALOX12P18054 663 aa4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 UBA1P22314 1058 aaKnown RBP4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 NLRP5P59047 1200 aa4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 TUBA1BP68363 451 aa4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 TFAP4Q01664 338 aa4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 ZRSR1Q15695 479 aaKnown RBP4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 PAPPA-AS1Q5QFB9 102 aa4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 PLEKHS1Q5SXH7 462 aa4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 LRIF1Q5T3J3 769 aa4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 SIGIRRQ6IA17 410 aa4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 SZRD1Q7Z422 152 aa4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 BEST3Q8N1M1 668 aa4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 MUC20Q8N307 709 aaPredicted RBP4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 RFLNBQ8N5W9 214 aa4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 HJURPQ8NCD3 748 aaPredicted RBP4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 SPATA22Q8NHS9 363 aa4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 TMEM255BQ8WV15 326 aa4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 RND1Q92730 232 aa4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 IGSF21Q96ID5 467 aa4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 EGLN2Q96KS0 407 aa4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 HARBI1Q96MB7 349 aa4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 INPP4AQ96PE3 977 aaPredicted RBP4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 PCGF1Q9BSM1 259 aa4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 SH2D4AQ9H788 454 aa4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 PCDH9Q9HC56 1237 aa4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 NOX4Q9NPH5 578 aa4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 ACSS1Q9NUB1 689 aaPredicted RBP4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 MTMR10Q9NXD2 777 aa4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 CWC15Q9P013 229 aaKnown RBP4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 SESN1Q9Y6P5 492 aa4.84□□□□□ -1.63
RAB3GAP1-202ENST00000425393 K7ENM7 598 aa4.83□□□□□ -1.64
RAB3GAP1-202ENST00000425393 SOCS6O14544 535 aa4.83□□□□□ -1.64
RAB3GAP1-202ENST00000425393 AP3D1O14617 1153 aa4.83□□□□□ -1.64
RAB3GAP1-202ENST00000425393 BUB3O43684 328 aa4.83□□□□□ -1.64
RAB3GAP1-202ENST00000425393 KRT36O76013 467 aa4.83□□□□□ -1.64
RAB3GAP1-202ENST00000425393 SRCP12931 536 aa4.83□□□□□ -1.64
RAB3GAP1-202ENST00000425393 SSTR2P30874 369 aa4.83□□□□□ -1.64
RAB3GAP1-202ENST00000425393 MC1RQ01726 317 aa4.83□□□□□ -1.64
RAB3GAP1-202ENST00000425393 GRIK2Q13002 908 aa4.83□□□□□ -1.64
RAB3GAP1-202ENST00000425393 CUL4AQ13619 759 aa4.83□□□□□ -1.64
RAB3GAP1-202ENST00000425393 SLC39A14Q15043 492 aa4.83□□□□□ -1.64
RAB3GAP1-202ENST00000425393 DECR1Q16698 335 aa4.83□□□□□ -1.64
RAB3GAP1-202ENST00000425393 ATP13A5Q4VNC0 1218 aa4.83□□□□□ -1.64
RAB3GAP1-202ENST00000425393 KIAA0930Q6ICG6 404 aaPredicted RBP4.83□□□□□ -1.64
RAB3GAP1-202ENST00000425393 ZNF280DQ6N043 979 aa4.83□□□□□ -1.64
RAB3GAP1-202ENST00000425393 FBXL22Q6P050 247 aa4.83□□□□□ -1.64
RAB3GAP1-202ENST00000425393 KCTD18Q6PI47 426 aaPredicted RBP4.83□□□□□ -1.64
RAB3GAP1-202ENST00000425393 CLEC17AQ6ZS10 378 aa4.83□□□□□ -1.64
RAB3GAP1-202ENST00000425393 DSELQ8IZU8 1212 aa4.83□□□□□ -1.64
RAB3GAP1-202ENST00000425393 PGBD5Q8N414 524 aa4.83□□□□□ -1.64
RAB3GAP1-202ENST00000425393 OR2AK2Q8NG84 335 aa4.83□□□□□ -1.64
RAB3GAP1-202ENST00000425393 MAGEC3Q8TD91 643 aa4.83□□□□□ -1.64
RAB3GAP1-202ENST00000425393 RHBDF1Q96CC6 855 aa4.83□□□□□ -1.64
RAB3GAP1-202ENST00000425393 ELMOD3Q96FG2 381 aa4.83□□□□□ -1.64
RAB3GAP1-202ENST00000425393 GRAMD2BQ96HH9 432 aa4.83□□□□□ -1.64
RAB3GAP1-202ENST00000425393 PKP4Q99569 1192 aa4.83□□□□□ -1.64
RAB3GAP1-202ENST00000425393 SDF4Q9BRK5 362 aa4.83□□□□□ -1.64
RAB3GAP1-202ENST00000425393 SLC28A3Q9HAS3 691 aa4.83□□□□□ -1.64
RAB3GAP1-202ENST00000425393 SEBOXQ9HB31 216 aaPredicted RBP4.83□□□□□ -1.64
RAB3GAP1-202ENST00000425393 MCM9Q9NXL9 1143 aa4.83□□□□□ -1.64
RAB3GAP1-202ENST00000425393 FBXL17Q9UF56 701 aa4.83□□□□□ -1.64
RAB3GAP1-202ENST00000425393 FBXW11Q9UKB1 542 aa4.83□□□□□ -1.64
RAB3GAP1-202ENST00000425393 TTC7AQ9ULT0 858 aaPredicted RBP4.83□□□□□ -1.64
RAB3GAP1-202ENST00000425393 IGLV5-37A0A075B6J1 123 aa4.82□□□□□ -1.64
RAB3GAP1-202ENST00000425393 A0A1W2PR77 199 aa4.82□□□□□ -1.64
RAB3GAP1-202ENST00000425393 C1orf226A1L170 272 aa4.82□□□□□ -1.64
RAB3GAP1-202ENST00000425393 ATP2A1O14983 1001 aa4.82□□□□□ -1.64
RAB3GAP1-202ENST00000425393 HNRNPCL1O60812 293 aaKnown RBP4.82□□□□□ -1.64
RAB3GAP1-202ENST00000425393 MCM3P25205 808 aa4.82□□□□□ -1.64
RAB3GAP1-202ENST00000425393 ILF3Q12906 894 aaKnown RBP eCLIP4.82□□□□□ -1.64
RAB3GAP1-202ENST00000425393 RAB41Q5JT25 222 aa4.82□□□□□ -1.64
RAB3GAP1-202ENST00000425393 WDR78Q5VTH9 848 aa4.82□□□□□ -1.64
RAB3GAP1-202ENST00000425393 SRBD1Q8N5C6 995 aaKnown RBP4.82□□□□□ -1.64
RAB3GAP1-202ENST00000425393 PCDH20Q8N6Y1 951 aaKnown RBP4.82□□□□□ -1.64
RAB3GAP1-202ENST00000425393 SCMH1Q96GD3 660 aa4.82□□□□□ -1.64
RAB3GAP1-202ENST00000425393 CCDC34Q96HJ3 373 aa4.82□□□□□ -1.64
RAB3GAP1-202ENST00000425393 GAREM1Q9H706 876 aa4.82□□□□□ -1.64
RAB3GAP1-202ENST00000425393 HAUS2Q9NVX0 235 aa4.82□□□□□ -1.64
RAB3GAP1-202ENST00000425393 OGFRQ9NZT2 677 aa4.82□□□□□ -1.64
RAB3GAP1-202ENST00000425393 SUCLA2Q9P2R7 463 aaPredicted RBP4.82□□□□□ -1.64
RAB3GAP1-202ENST00000425393 hDV102S1A0JD36 115 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms