RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 ZNF678Q5SXM1 525 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 ZNF549Q6P9A3 640 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 CHSY3Q70JA7 882 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 ARHGAP22Q7Z5H3 698 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 DDIASQ8IXT1 998 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 DLG3Q92796 817 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 C19orf60Q96EN9 201 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 EXOC2Q96KP1 924 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 SPATA17Q96L03 361 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 MID1IP1Q9NPA3 183 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 SMPD4Q9NXE4 827 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 FNIP2Q9P278 1114 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 AP4B1Q9Y6B7 739 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 MIA3Q5JRA6 1907 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 GREB1Q4ZG55 1949 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 A0A0D9SEW6 157 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 C2orf78A6NCI8 922 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 GFAPP14136 432 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 GJA1P17302 382 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 GSTT1P30711 240 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 KCNQ1P51787 676 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 ROR2Q01974 943 aaKnown RBP10.63□□□□□ -0.71
CUX1-205ENST00000425244 IL10RBQ08334 325 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 SERINC3Q13530 473 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 TPGS2Q68CL5 300 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 FAM45BPQ6NSW5 357 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 MRNIPQ6NTE8 343 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 DNAJB7Q7Z6W7 309 aaPredicted RBP10.63□□□□□ -0.71
CUX1-205ENST00000425244 SATL1Q86VE3 508 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 LGI2Q8N0V4 545 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 PIP4K2CQ8TBX8 421 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 FAM45AQ8TCE6 357 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 ABHD8Q96I13 439 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 C3orf30Q96M34 536 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 CYP2S1Q96SQ9 504 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 SPATA16Q9BXB7 569 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 UBAP1Q9NZ09 502 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 INSL5Q9Y5Q6 135 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 COL4A4P53420 1690 aaPredicted RBP10.63□□□□□ -0.71
CUX1-205ENST00000425244 MYOCOSA0A1B0GUC4 107 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 PRORSD1PA6NEY8 169 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 NR5A2O00482 541 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 GRM6O15303 877 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 TPD52L2O43399 206 aaKnown RBP10.63□□□□□ -0.71
CUX1-205ENST00000425244 ATP6V1B1P15313 513 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 CD1DP15813 335 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 HERVK_113P63132 956 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 TRIM25Q14258 630 aaKnown RBP10.63□□□□□ -0.71
CUX1-205ENST00000425244 NRF1Q16656 503 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 ZNF697Q5TEC3 545 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 TEX26Q8N6G2 289 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 SLC22A17Q8WUG5 538 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 STON2Q8WXE9 905 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 EME1Q96AY2 570 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 ASB9Q96DX5 294 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 NSUN5Q96P11 429 aaKnown RBP10.63□□□□□ -0.71
CUX1-205ENST00000425244 KCNA7Q96RP8 456 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 YIPF2Q9BWQ6 316 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 ERVK-6Q9BXR3 956 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 TMEM165Q9HC07 324 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 SPAG4Q9NPE6 437 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 GKN1Q9NS71 199 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 CATSPERZQ9NTU4 200 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 UTP6Q9NYH9 597 aaKnown RBP10.63□□□□□ -0.71
CUX1-205ENST00000425244 GMPR2Q9P2T1 348 aaKnown RBP10.63□□□□□ -0.71
CUX1-205ENST00000425244 FAM50BQ9Y247 325 aa10.63□□□□□ -0.71
CUX1-205ENST00000425244 PRSS51A0A1B0GVH4 220 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 LOC285095A0A1B0GVY8 99 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 NRP2O60462 931 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 SRP72O76094 671 aaKnown RBP10.62□□□□□ -0.71
CUX1-205ENST00000425244 ADH1AP07327 375 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 HMGA1P17096 107 aaKnown RBP10.62□□□□□ -0.71
CUX1-205ENST00000425244 SLC7A2P52569 658 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 EPHB3P54753 998 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 SH3BP2P78314 561 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 LRP8Q14114 963 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 OR4D1Q15615 310 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 SLC14A2Q15849 920 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 MAP7D1Q3KQU3 841 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 PARP15Q460N3 678 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 NADSYN1Q6IA69 706 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 IYDQ6PHW0 289 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 CYHR1Q6ZMK1 362 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 RAB44Q7Z6P3 723 aaPredicted RBP10.62□□□□□ -0.71
CUX1-205ENST00000425244 GALNT15Q8N3T1 639 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 CATSPER1Q8NEC5 780 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 OR7D4Q8NG98 312 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 TRPC4APQ8TEL6 797 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 LPGAT1Q92604 370 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 SMIM14Q96QK8 99 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 SLC25A23Q9BV35 468 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 AKTIPQ9H8T0 292 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 TRPM5Q9NZQ8 1165 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 BTRCQ9Y297 605 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 AP4S1Q9Y587 144 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 IGLV3-10A0A075B6K4 115 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 SUPT3HB4E1H0 165 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 H3BMM5 538 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 CCL16O15467 120 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 SUPT3HO75486 399 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms