RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 ANXA9O76027 345 aa17.76■□□□□ 0.43
IGHV3-47-201ENST00000425060 AGTP01019 485 aa17.76■□□□□ 0.43
IGHV3-47-201ENST00000425060 ATP1A1P05023 1023 aaKnown RBP17.76■□□□□ 0.43
IGHV3-47-201ENST00000425060 FGF1P05230 155 aa17.76■□□□□ 0.43
IGHV3-47-201ENST00000425060 PSMB4P28070 264 aa17.76■□□□□ 0.43
IGHV3-47-201ENST00000425060 ILF3Q12906 894 aaKnown RBP eCLIP17.76■□□□□ 0.43
IGHV3-47-201ENST00000425060 MSLNQ13421 630 aaPredicted RBP17.76■□□□□ 0.43
IGHV3-47-201ENST00000425060 HLTFQ14527 1009 aaKnown RBP eCLIP17.76■□□□□ 0.43
IGHV3-47-201ENST00000425060 RTP5Q14D33 572 aa17.76■□□□□ 0.43
IGHV3-47-201ENST00000425060 PROSER1Q86XN7 944 aa17.76■□□□□ 0.43
IGHV3-47-201ENST00000425060 OR6C4Q8NGE1 309 aa17.76■□□□□ 0.43
IGHV3-47-201ENST00000425060 OR2M4Q96R27 311 aa17.76■□□□□ 0.43
IGHV3-47-201ENST00000425060 CCDC3Q9BQI4 270 aa17.76■□□□□ 0.43
IGHV3-47-201ENST00000425060 ZSCAN5AQ9BUG6 496 aa17.76■□□□□ 0.43
IGHV3-47-201ENST00000425060 NRSN2Q9GZP1 204 aa17.76■□□□□ 0.43
IGHV3-47-201ENST00000425060 ABCG4Q9H172 646 aa17.76■□□□□ 0.43
IGHV3-47-201ENST00000425060 CCDC86Q9H6F5 360 aaKnown RBP17.76■□□□□ 0.43
IGHV3-47-201ENST00000425060 SUDS3Q9H7L9 328 aaPredicted RBP17.76■□□□□ 0.43
IGHV3-47-201ENST00000425060 IL17CQ9P0M4 197 aa17.76■□□□□ 0.43
IGHV3-47-201ENST00000425060 TAAR2Q9P1P5 351 aa17.76■□□□□ 0.43
IGHV3-47-201ENST00000425060 FREM2Q5SZK8 3169 aa17.75■□□□□ 0.43
IGHV3-47-201ENST00000425060 SCN8AQ9UQD0 1980 aa17.75■□□□□ 0.43
IGHV3-47-201ENST00000425060 NTN3O00634 580 aaPredicted RBP17.75■□□□□ 0.43
IGHV3-47-201ENST00000425060 CYP4F3Q08477 520 aa17.75■□□□□ 0.43
IGHV3-47-201ENST00000425060 C14orf28Q4W4Y0 310 aa17.75■□□□□ 0.43
IGHV3-47-201ENST00000425060 CERCAMQ5T4B2 595 aa17.75■□□□□ 0.43
IGHV3-47-201ENST00000425060 ALS2CLQ60I27 953 aa17.75■□□□□ 0.43
IGHV3-47-201ENST00000425060 PDPK2PQ6A1A2 396 aa17.75■□□□□ 0.43
IGHV3-47-201ENST00000425060 MARK2Q7KZI7 788 aaKnown RBP17.75■□□□□ 0.43
IGHV3-47-201ENST00000425060 DTX3LQ8TDB6 740 aa17.75■□□□□ 0.43
IGHV3-47-201ENST00000425060 CCDC74AQ96AQ1 378 aa17.75■□□□□ 0.43
IGHV3-47-201ENST00000425060 PLEKHG4BQ96PX9 1271 aa17.75■□□□□ 0.43
IGHV3-47-201ENST00000425060 SPATA16Q9BXB7 569 aa17.75■□□□□ 0.43
IGHV3-47-201ENST00000425060 DPEP2Q9H4A9 486 aa17.75■□□□□ 0.43
IGHV3-47-201ENST00000425060 BPIFA1Q9NP55 256 aa17.75■□□□□ 0.43
IGHV3-47-201ENST00000425060 LZTFL1Q9NQ48 299 aa17.75■□□□□ 0.43
IGHV3-47-201ENST00000425060 HACD3Q9P035 362 aa17.75■□□□□ 0.43
IGHV3-47-201ENST00000425060 TMPRSS11EQ9UL52 423 aa17.75■□□□□ 0.43
IGHV3-47-201ENST00000425060 AAR2Q9Y312 384 aaKnown RBP17.75■□□□□ 0.43
IGHV3-47-201ENST00000425060 GPSM3Q9Y4H4 160 aa17.75■□□□□ 0.43
IGHV3-47-201ENST00000425060 DMXL2Q8TDJ6 3036 aa17.74■□□□□ 0.43
IGHV3-47-201ENST00000425060 NUAK1O60285 661 aa17.74■□□□□ 0.43
IGHV3-47-201ENST00000425060 TCEA3O75764 348 aa17.74■□□□□ 0.43
IGHV3-47-201ENST00000425060 STK10O94804 968 aaKnown RBP17.74■□□□□ 0.43
IGHV3-47-201ENST00000425060 ASMTLO95671 621 aa17.74■□□□□ 0.43
IGHV3-47-201ENST00000425060 SLC4A1P02730 911 aa17.74■□□□□ 0.43
IGHV3-47-201ENST00000425060 PNLIPP16233 465 aa17.74■□□□□ 0.43
IGHV3-47-201ENST00000425060 GLB1P16278 677 aa17.74■□□□□ 0.43
IGHV3-47-201ENST00000425060 GDF10P55107 478 aa17.74■□□□□ 0.43
IGHV3-47-201ENST00000425060 OLIG2Q13516 323 aa17.74■□□□□ 0.43
IGHV3-47-201ENST00000425060 SLC30A9Q6PML9 568 aa17.74■□□□□ 0.43
IGHV3-47-201ENST00000425060 SLC13A5Q86YT5 568 aaPredicted RBP17.74■□□□□ 0.43
IGHV3-47-201ENST00000425060 GALNT13Q8IUC8 556 aa17.74■□□□□ 0.43
IGHV3-47-201ENST00000425060 NAGSQ8N159 534 aa17.74■□□□□ 0.43
IGHV3-47-201ENST00000425060 FAM71DQ8N9W8 422 aa17.74■□□□□ 0.43
IGHV3-47-201ENST00000425060 WDR48Q8TAF3 677 aa17.74■□□□□ 0.43
IGHV3-47-201ENST00000425060 DEPDC7Q96QD5 511 aa17.74■□□□□ 0.43
IGHV3-47-201ENST00000425060 FICDQ9BVA6 458 aa17.74■□□□□ 0.43
IGHV3-47-201ENST00000425060 FSD1LQ9BXM9 530 aa17.74■□□□□ 0.43
IGHV3-47-201ENST00000425060 CARD9Q9H257 536 aa17.74■□□□□ 0.43
IGHV3-47-201ENST00000425060 RMI1Q9H9A7 625 aa17.74■□□□□ 0.43
IGHV3-47-201ENST00000425060 ATXN10Q9UBB4 475 aa17.74■□□□□ 0.43
IGHV3-47-201ENST00000425060 APPL1Q9UKG1 709 aa17.74■□□□□ 0.43
IGHV3-47-201ENST00000425060 PCDHB1Q9Y5F3 818 aa17.74■□□□□ 0.43
IGHV3-47-201ENST00000425060 A0A1W2PQM1 296 aa17.73■□□□□ 0.43
IGHV3-47-201ENST00000425060 SRRM3A6NNA2 597 aaPredicted RBP17.73■□□□□ 0.43
IGHV3-47-201ENST00000425060 B4DGG1 531 aa17.73■□□□□ 0.43
IGHV3-47-201ENST00000425060 NUDT21O43809 227 aaKnown RBP17.73■□□□□ 0.43
IGHV3-47-201ENST00000425060 CSO75390 466 aaKnown RBP17.73■□□□□ 0.43
IGHV3-47-201ENST00000425060 PTMAP06454 111 aaKnown RBP17.73■□□□□ 0.43
IGHV3-47-201ENST00000425060 TNNT3P45378 269 aaPredicted RBP17.73■□□□□ 0.43
IGHV3-47-201ENST00000425060 LRP8Q14114 963 aa17.73■□□□□ 0.43
IGHV3-47-201ENST00000425060 PRPSAP1Q14558 356 aa17.73■□□□□ 0.43
IGHV3-47-201ENST00000425060 RPS6KA1Q15418 735 aa17.73■□□□□ 0.43
IGHV3-47-201ENST00000425060 ISXQ2M1V0 245 aa17.73■□□□□ 0.43
IGHV3-47-201ENST00000425060 ZNF569Q5MCW4 686 aa17.73■□□□□ 0.43
IGHV3-47-201ENST00000425060 ZNF648Q5T619 568 aaPredicted RBP17.73■□□□□ 0.43
IGHV3-47-201ENST00000425060 KCTD11Q693B1 232 aa17.73■□□□□ 0.43
IGHV3-47-201ENST00000425060 DENND5AQ6IQ26 1287 aa17.73■□□□□ 0.43
IGHV3-47-201ENST00000425060 BLOC1S5Q8TDH9 187 aa17.73■□□□□ 0.43
IGHV3-47-201ENST00000425060 ZDHHC1Q8WTX9 485 aa17.73■□□□□ 0.43
IGHV3-47-201ENST00000425060 GLYATL1Q969I3 302 aa17.73■□□□□ 0.43
IGHV3-47-201ENST00000425060 RTP4Q96DX8 246 aa17.73■□□□□ 0.43
IGHV3-47-201ENST00000425060 VPS35Q96QK1 796 aa17.73■□□□□ 0.43
IGHV3-47-201ENST00000425060 TMEM121Q9BTD3 319 aa17.73■□□□□ 0.43
IGHV3-47-201ENST00000425060 ARNT2Q9HBZ2 717 aa17.73■□□□□ 0.43
IGHV3-47-201ENST00000425060 TRIM39Q9HCM9 518 aa17.73■□□□□ 0.43
IGHV3-47-201ENST00000425060 IL26Q9NPH9 171 aa17.73■□□□□ 0.43
IGHV3-47-201ENST00000425060 ZNHIT2Q9UHR6 403 aa17.73■□□□□ 0.43
IGHV3-47-201ENST00000425060 PPP2R2CQ9Y2T4 447 aa17.73■□□□□ 0.43
IGHV3-47-201ENST00000425060 RNF215Q9Y6U7 377 aa17.73■□□□□ 0.43
IGHV3-47-201ENST00000425060 CACNA1BQ00975 2339 aa17.72■□□□□ 0.43
IGHV3-47-201ENST00000425060 GAPDHSO14556 408 aaPredicted RBP17.72■□□□□ 0.43
IGHV3-47-201ENST00000425060 CHUKO15111 745 aa17.72■□□□□ 0.43
IGHV3-47-201ENST00000425060 SLC25A14O95258 325 aaPredicted RBP17.72■□□□□ 0.43
IGHV3-47-201ENST00000425060 METTL18O95568 372 aa17.72■□□□□ 0.43
IGHV3-47-201ENST00000425060 ECEL1O95672 775 aa17.72■□□□□ 0.43
IGHV3-47-201ENST00000425060 ZNF8P17098 575 aaPredicted RBP17.72■□□□□ 0.43
IGHV3-47-201ENST00000425060 ACTR1BP42025 376 aa17.72■□□□□ 0.43
IGHV3-47-201ENST00000425060 PDX1P52945 283 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms