RNA–Protein interactions for RNA: ENST00000423653.5

CCDC78-203, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC78, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-203ENST00000423653 ZNHIT2Q9UHR6 403 aa16.66■□□□□ 0.26
CCDC78-203ENST00000423653 ST14Q9Y5Y6 855 aa16.66■□□□□ 0.26
CCDC78-203ENST00000423653 FASNP49327 2511 aaKnown RBP16.66■□□□□ 0.26
CCDC78-203ENST00000423653 SMG1Q96Q15 3661 aaKnown RBP16.65■□□□□ 0.26
CCDC78-203ENST00000423653 B4GAT1O43505 415 aa16.65■□□□□ 0.26
CCDC78-203ENST00000423653 PSTPIP1O43586 416 aa16.65■□□□□ 0.26
CCDC78-203ENST00000423653 TNNT1P13805 278 aa16.65■□□□□ 0.26
CCDC78-203ENST00000423653 ITIH1P19827 911 aa16.65■□□□□ 0.26
CCDC78-203ENST00000423653 TNNT3P45378 269 aaPredicted RBP16.65■□□□□ 0.26
CCDC78-203ENST00000423653 FASLGP48023 281 aa16.65■□□□□ 0.26
CCDC78-203ENST00000423653 NR2C2P49116 596 aa16.65■□□□□ 0.26
CCDC78-203ENST00000423653 DCDC1P59894 354 aa16.65■□□□□ 0.26
CCDC78-203ENST00000423653 DYNLT1P63172 113 aa16.65■□□□□ 0.26
CCDC78-203ENST00000423653 GPLD1P80108 840 aa16.65■□□□□ 0.26
CCDC78-203ENST00000423653 TRA2AQ13595 282 aaKnown RBP eCLIP16.65■□□□□ 0.26
CCDC78-203ENST00000423653 ZNF569Q5MCW4 686 aa16.65■□□□□ 0.26
CCDC78-203ENST00000423653 LYSMD3Q7Z3D4 306 aa16.65■□□□□ 0.26
CCDC78-203ENST00000423653 TMPRSS9Q7Z410 1059 aa16.65■□□□□ 0.26
CCDC78-203ENST00000423653 CCDC112Q8NEF3 446 aa16.65■□□□□ 0.26
CCDC78-203ENST00000423653 RNF25Q96BH1 459 aaPredicted RBP16.65■□□□□ 0.26
CCDC78-203ENST00000423653 SRPK1Q96SB4 655 aaKnown RBP16.65■□□□□ 0.26
CCDC78-203ENST00000423653 NUDT22Q9BRQ3 303 aa16.65■□□□□ 0.26
CCDC78-203ENST00000423653 HERPUD2Q9BSE4 406 aa16.65■□□□□ 0.26
CCDC78-203ENST00000423653 ZSCAN5AQ9BUG6 496 aa16.65■□□□□ 0.26
CCDC78-203ENST00000423653 CEP41Q9BYV8 373 aa16.65■□□□□ 0.26
CCDC78-203ENST00000423653 B3GNT4Q9C0J1 378 aa16.65■□□□□ 0.26
CCDC78-203ENST00000423653 SLC25A51Q9H1U9 297 aa16.65■□□□□ 0.26
CCDC78-203ENST00000423653 SEMA6CQ9H3T2 930 aa16.65■□□□□ 0.26
CCDC78-203ENST00000423653 ZFYVE1Q9HBF4 777 aa16.65■□□□□ 0.26
CCDC78-203ENST00000423653 KCNK4Q9NYG8 393 aa16.65■□□□□ 0.26
CCDC78-203ENST00000423653 NFKBIL1Q9UBC1 381 aaPredicted RBP16.65■□□□□ 0.26
CCDC78-203ENST00000423653 IGHV1OR21-1A0A087WYE8 117 aa16.64■□□□□ 0.25
CCDC78-203ENST00000423653 A0A0A6YYK5 440 aaPredicted RBP16.64■□□□□ 0.25
CCDC78-203ENST00000423653 FADS2P1A8MWK0 482 aa16.64■□□□□ 0.25
CCDC78-203ENST00000423653 GPR89AB7ZAQ6 455 aa16.64■□□□□ 0.25
CCDC78-203ENST00000423653 DUX1O43812 170 aa16.64■□□□□ 0.25
CCDC78-203ENST00000423653 SLC4A1P02730 911 aa16.64■□□□□ 0.25
CCDC78-203ENST00000423653 ATP1A1P05023 1023 aaKnown RBP16.64■□□□□ 0.25
CCDC78-203ENST00000423653 GPR89BP0CG08 455 aa16.64■□□□□ 0.25
CCDC78-203ENST00000423653 COMTP21964 271 aa16.64■□□□□ 0.25
CCDC78-203ENST00000423653 PPM1FP49593 454 aaPredicted RBP16.64■□□□□ 0.25
CCDC78-203ENST00000423653 MAPK10P53779 464 aa16.64■□□□□ 0.25
CCDC78-203ENST00000423653 PCSK7Q16549 785 aa16.64■□□□□ 0.25
CCDC78-203ENST00000423653 PDPK2PQ6A1A2 396 aa16.64■□□□□ 0.25
CCDC78-203ENST00000423653 CCDC70Q6NSX1 233 aa16.64■□□□□ 0.25
CCDC78-203ENST00000423653 NPNTQ6UXI9 565 aa16.64■□□□□ 0.25
CCDC78-203ENST00000423653 PHYKPLQ8IUZ5 450 aa16.64■□□□□ 0.25
CCDC78-203ENST00000423653 SFRP1Q8N474 314 aa16.64■□□□□ 0.25
CCDC78-203ENST00000423653 AVL9Q8NBF6 648 aa16.64■□□□□ 0.25
CCDC78-203ENST00000423653 OR4D9Q8NGE8 314 aa16.64■□□□□ 0.25
CCDC78-203ENST00000423653 OR10G6Q8NH81 332 aa16.64■□□□□ 0.25
CCDC78-203ENST00000423653 SLC37A2Q8TED4 501 aa16.64■□□□□ 0.25
CCDC78-203ENST00000423653 AHCYL2Q96HN2 611 aaKnown RBP16.64■□□□□ 0.25
CCDC78-203ENST00000423653 CCDC74BQ96LY2 380 aa16.64■□□□□ 0.25
CCDC78-203ENST00000423653 TRIB3Q96RU7 358 aa16.64■□□□□ 0.25
CCDC78-203ENST00000423653 WDR24Q96S15 920 aa16.64■□□□□ 0.25
CCDC78-203ENST00000423653 SPATA16Q9BXB7 569 aa16.64■□□□□ 0.25
CCDC78-203ENST00000423653 CARD9Q9H257 536 aa16.64■□□□□ 0.25
CCDC78-203ENST00000423653 MAGEE1Q9HCI5 957 aa16.64■□□□□ 0.25
CCDC78-203ENST00000423653 LUC7LQ9NQ29 371 aaKnown RBP16.64■□□□□ 0.25
CCDC78-203ENST00000423653 ZNF711Q9Y462 761 aa16.64■□□□□ 0.25
CCDC78-203ENST00000423653 OAS3Q9Y6K5 1087 aaKnown RBP16.64■□□□□ 0.25
CCDC78-203ENST00000423653 PRAMEF33A0A0G2JMD5 474 aa16.63■□□□□ 0.25
CCDC78-203ENST00000423653 IGHV5-10-1A0A0J9YXX1 117 aa16.63■□□□□ 0.25
CCDC78-203ENST00000423653 MTSS1O43312 755 aa16.63■□□□□ 0.25
CCDC78-203ENST00000423653 PRAMEF10O60809 474 aa16.63■□□□□ 0.25
CCDC78-203ENST00000423653 DNAJC6O75061 913 aa16.63■□□□□ 0.25
CCDC78-203ENST00000423653 PRB1P04280 392 aa16.63■□□□□ 0.25
CCDC78-203ENST00000423653 ACP5P13686 325 aa16.63■□□□□ 0.25
CCDC78-203ENST00000423653 CD1CP29017 333 aa16.63■□□□□ 0.25
CCDC78-203ENST00000423653 NOP2P46087 812 aaKnown RBP16.63■□□□□ 0.25
CCDC78-203ENST00000423653 LIMK2P53671 638 aa16.63■□□□□ 0.25
CCDC78-203ENST00000423653 HADHBP55084 474 aaKnown RBP16.63■□□□□ 0.25
CCDC78-203ENST00000423653 HHEXQ03014 270 aa16.63■□□□□ 0.25
CCDC78-203ENST00000423653 CDK18Q07002 472 aa16.63■□□□□ 0.25
CCDC78-203ENST00000423653 SQSTM1Q13501 440 aa16.63■□□□□ 0.25
CCDC78-203ENST00000423653 C16orf72Q14CZ0 275 aa16.63■□□□□ 0.25
CCDC78-203ENST00000423653 PRKD1Q15139 912 aaPredicted RBP16.63■□□□□ 0.25
CCDC78-203ENST00000423653 SARM1Q6SZW1 724 aa16.63■□□□□ 0.25
CCDC78-203ENST00000423653 MFSD7Q6UXD7 560 aa16.63■□□□□ 0.25
CCDC78-203ENST00000423653 USP53Q70EK8 1073 aa16.63■□□□□ 0.25
CCDC78-203ENST00000423653 CHST15Q7LFX5 561 aaPredicted RBP16.63■□□□□ 0.25
CCDC78-203ENST00000423653 AGBL5Q8NDL9 886 aa16.63■□□□□ 0.25
CCDC78-203ENST00000423653 TFB1MQ8WVM0 346 aaKnown RBP16.63■□□□□ 0.25
CCDC78-203ENST00000423653 SH3KBP1Q96B97 665 aa16.63■□□□□ 0.25
CCDC78-203ENST00000423653 SLC38A3Q99624 504 aa16.63■□□□□ 0.25
CCDC78-203ENST00000423653 GPR63Q9BZJ6 419 aa16.63■□□□□ 0.25
CCDC78-203ENST00000423653 SARS2Q9NP81 518 aaKnown RBP16.63■□□□□ 0.25
CCDC78-203ENST00000423653 CNOT6Q9ULM6 557 aaKnown RBP16.63■□□□□ 0.25
CCDC78-203ENST00000423653 PLEKHM1Q9Y4G2 1056 aa16.63■□□□□ 0.25
CCDC78-203ENST00000423653 PCDHB11Q9Y5F2 797 aa16.63■□□□□ 0.25
CCDC78-203ENST00000423653 AGRPO00253 132 aa16.62■□□□□ 0.25
CCDC78-203ENST00000423653 PPM1DO15297 605 aa16.62■□□□□ 0.25
CCDC78-203ENST00000423653 C1QL1O75973 258 aa16.62■□□□□ 0.25
CCDC78-203ENST00000423653 SLC25A14O95258 325 aaPredicted RBP16.62■□□□□ 0.25
CCDC78-203ENST00000423653 NDST3O95803 873 aa16.62■□□□□ 0.25
CCDC78-203ENST00000423653 THRAP10827 490 aa16.62■□□□□ 0.25
CCDC78-203ENST00000423653 CSF2RBP32927 897 aa16.62■□□□□ 0.25
CCDC78-203ENST00000423653 ETV5P41161 510 aa16.62■□□□□ 0.25
CCDC78-203ENST00000423653 CDKN2BP42772 138 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms