RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 MTTPP55157 894 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 PSME3P61289 254 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 NTHL1P78549 312 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 ADGRF1Q5T601 910 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 FBXL19Q6PCT2 694 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 TMEM150AQ86TG1 271 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 RNF175Q8N4F7 328 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 ZNF461Q8TAF7 563 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 TWIST2Q8WVJ9 160 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 C19orf60Q96EN9 201 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 NSMCE4AQ9NXX6 385 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 SNX13Q9Y5W8 968 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 TRANK1O15050 2925 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 CROCCQ5TZA2 2017 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 ANKRD36A6QL64 1941 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 H3BNX3 289 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 SLC7A4O43246 635 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 SMNDC1O75940 238 aaKnown RBP eCLIP11.86□□□□□ -0.51
PTPRN-204ENST00000423636 LMNAP02545 664 aaKnown RBP11.86□□□□□ -0.51
PTPRN-204ENST00000423636 ALOX15P16050 662 aaPredicted RBP11.86□□□□□ -0.51
PTPRN-204ENST00000423636 MAGEA11P43364 429 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 HTR6P50406 440 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 HK3P52790 923 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 POLE2P56282 527 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 BLMHQ13867 455 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 RABL3Q5HYI8 236 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 ADGRG2Q8IZP9 1017 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 OR10Q1Q8NGQ4 319 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 ING5Q8WYH8 240 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 MRPL1Q9BYD6 325 aaKnown RBP11.86□□□□□ -0.51
PTPRN-204ENST00000423636 CWH43Q9H720 699 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 SLCO3A1Q9UIG8 710 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 THSD7BQ9C0I4 1608 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 C2orf81A6NN90 581 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 TIPRLO75663 272 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 IGLV3-27P01718 113 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 CKMT2P17540 419 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 REP15Q6BDI9 236 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 PGM2L1Q6PCE3 622 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 RBM23Q86U06 439 aaKnown RBP11.86□□□□□ -0.51
PTPRN-204ENST00000423636 LRRC43Q8N309 656 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 TEX26Q8N6G2 289 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 LRTOMTQ8WZ04 291 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 PYCR2Q96C36 320 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 TCEAL4Q96EI5 215 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 YME1L1Q96TA2 773 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 FEM1AQ9BSK4 669 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 RTKNQ9BST9 563 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 MMADHCQ9H3L0 296 aaPredicted RBP11.86□□□□□ -0.51
PTPRN-204ENST00000423636 EFCAB1Q9HAE3 211 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 OLA1Q9NTK5 396 aaKnown RBP11.86□□□□□ -0.51
PTPRN-204ENST00000423636 MRASO14807 208 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 TBC1D4O60343 1298 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 OR6B1O95007 311 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 APOA4P06727 396 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 ACAP2Q15057 778 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 MTX3Q5HYI7 312 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 GAREM2Q75VX8 874 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 RALGPS2Q86X27 583 aaPredicted RBP11.85□□□□□ -0.51
PTPRN-204ENST00000423636 ZSWIM9Q86XI8 627 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 FUNDC1Q8IVP5 155 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 ARNT2Q9HBZ2 717 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 FARSBQ9NSD9 589 aaKnown RBP11.85□□□□□ -0.51
PTPRN-204ENST00000423636 PDLIM1O00151 329 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 PER2O15055 1255 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 RNASEH2AO75792 299 aaKnown RBP11.85□□□□□ -0.51
PTPRN-204ENST00000423636 CLIC3O95833 236 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 B3GALT4O96024 378 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 FGF1P05230 155 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 CCL5P13501 91 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 HSPA7P48741 367 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 CSRP3P50461 194 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 ZNF135P52742 658 aaPredicted RBP11.85□□□□□ -0.51
PTPRN-204ENST00000423636 CLCQ05315 142 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 ZNF423Q2M1K9 1284 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 CTSL3PQ5NE16 218 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 THEMIS2Q5TEJ8 643 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 LPGAT1Q92604 370 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 PSKH2Q96QS6 385 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 CIB1Q99828 191 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 AARSD1Q9BTE6 412 aaKnown RBP11.85□□□□□ -0.51
PTPRN-204ENST00000423636 CIPCQ9C0C6 399 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 NSUN3Q9H649 340 aaKnown RBP11.85□□□□□ -0.51
PTPRN-204ENST00000423636 ZNF225Q9UK10 706 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 A0A0J9YYE9 177 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 SAC3D1A6NKF1 404 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 WASH4PA8MWX3 477 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 H7C4K7 107 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 TMEM189-UBE2V1I3L0A0 370 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 FKTNO75072 461 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 SEC24DO94855 1032 aaPredicted RBP11.85□□□□□ -0.51
PTPRN-204ENST00000423636 RBP1P09455 135 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 EFNA1P20827 205 aaPredicted RBP11.85□□□□□ -0.51
PTPRN-204ENST00000423636 IMPDH1P20839 514 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 GRIA3P42263 894 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 CDH4P55283 916 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 CBLBQ13191 982 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 TSTA3Q13630 321 aaPredicted RBP11.85□□□□□ -0.51
PTPRN-204ENST00000423636 FOXB2Q5VYV0 432 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 SPPL2CQ8IUH8 684 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms