RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 SLC13A5Q86YT5 568 aaPredicted RBP10.87□□□□□ -0.67
USP49-204ENST00000423567 SLC35F3Q8IY50 421 aa10.87□□□□□ -0.67
USP49-204ENST00000423567 TRAM1L1Q8N609 369 aa10.87□□□□□ -0.67
USP49-204ENST00000423567 FAM71DQ8N9W8 422 aa10.87□□□□□ -0.67
USP49-204ENST00000423567 OR2M4Q96R27 311 aa10.87□□□□□ -0.67
USP49-204ENST00000423567 FICDQ9BVA6 458 aa10.87□□□□□ -0.67
USP49-204ENST00000423567 DPEP2Q9H4A9 486 aa10.87□□□□□ -0.67
USP49-204ENST00000423567 VPS18Q9P253 973 aa10.87□□□□□ -0.67
USP49-204ENST00000423567 NFKBIL1Q9UBC1 381 aaPredicted RBP10.87□□□□□ -0.67
USP49-204ENST00000423567 CLCA2Q9UQC9 943 aa10.87□□□□□ -0.67
USP49-204ENST00000423567 TMEM98Q9Y2Y6 226 aa10.87□□□□□ -0.67
USP49-204ENST00000423567 PKP3Q9Y446 797 aa10.87□□□□□ -0.67
USP49-204ENST00000423567 LY6G6EA0A0G2JKS1 128 aa10.86□□□□□ -0.67
USP49-204ENST00000423567 FAM149AA5PLN7 773 aa10.86□□□□□ -0.67
USP49-204ENST00000423567 C1QTNF9BB2RNN3 333 aa10.86□□□□□ -0.67
USP49-204ENST00000423567 ZSCAN12O43309 604 aa10.86□□□□□ -0.67
USP49-204ENST00000423567 OPA1O60313 960 aa10.86□□□□□ -0.67
USP49-204ENST00000423567 PPFIA2O75334 1257 aa10.86□□□□□ -0.67
USP49-204ENST00000423567 SLC25A14O95258 325 aaPredicted RBP10.86□□□□□ -0.67
USP49-204ENST00000423567 MT-CO3P00414 261 aa10.86□□□□□ -0.67
USP49-204ENST00000423567 PROS1P07225 676 aa10.86□□□□□ -0.67
USP49-204ENST00000423567 C1QTNF9P0C862 333 aa10.86□□□□□ -0.67
USP49-204ENST00000423567 STIP1P31948 543 aaKnown RBP10.86□□□□□ -0.67
USP49-204ENST00000423567 MLLT3P42568 568 aaPredicted RBP10.86□□□□□ -0.67
USP49-204ENST00000423567 CHRNA4P43681 627 aa10.86□□□□□ -0.67
USP49-204ENST00000423567 LRP8Q14114 963 aa10.86□□□□□ -0.67
USP49-204ENST00000423567 PARP6Q2NL67 630 aa10.86□□□□□ -0.67
USP49-204ENST00000423567 KCTD16Q68DU8 428 aa10.86□□□□□ -0.67
USP49-204ENST00000423567 GUSBP11Q6P575 273 aa10.86□□□□□ -0.67
USP49-204ENST00000423567 PHYKPLQ8IUZ5 450 aa10.86□□□□□ -0.67
USP49-204ENST00000423567 KYQ8NBH2 561 aa10.86□□□□□ -0.67
USP49-204ENST00000423567 GPR26Q8NDV2 337 aa10.86□□□□□ -0.67
USP49-204ENST00000423567 WDR48Q8TAF3 677 aa10.86□□□□□ -0.67
USP49-204ENST00000423567 SLC35B2Q8TB61 432 aa10.86□□□□□ -0.67
USP49-204ENST00000423567 GPBAR1Q8TDU6 330 aa10.86□□□□□ -0.67
USP49-204ENST00000423567 MAIP1Q8WWC4 291 aa10.86□□□□□ -0.67
USP49-204ENST00000423567 GATA6Q92908 595 aa10.86□□□□□ -0.67
USP49-204ENST00000423567 COX14Q96I36 57 aa10.86□□□□□ -0.67
USP49-204ENST00000423567 PLEKHG4BQ96PX9 1271 aa10.86□□□□□ -0.67
USP49-204ENST00000423567 DEPDC7Q96QD5 511 aa10.86□□□□□ -0.67
USP49-204ENST00000423567 TBL1YQ9BQ87 522 aa10.86□□□□□ -0.67
USP49-204ENST00000423567 TMEM121Q9BTD3 319 aa10.86□□□□□ -0.67
USP49-204ENST00000423567 RMI1Q9H9A7 625 aa10.86□□□□□ -0.67
USP49-204ENST00000423567 BPIFA1Q9NP55 256 aa10.86□□□□□ -0.67
USP49-204ENST00000423567 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.86□□□□□ -0.67
USP49-204ENST00000423567 ZNHIT2Q9UHR6 403 aa10.86□□□□□ -0.67
USP49-204ENST00000423567 FEZ2Q9UHY8 353 aaPredicted RBP10.86□□□□□ -0.67
USP49-204ENST00000423567 ZNF148Q9UQR1 794 aa10.86□□□□□ -0.67
USP49-204ENST00000423567 R3HDM2Q9Y2K5 976 aaKnown RBP10.86□□□□□ -0.67
USP49-204ENST00000423567 SPO11Q9Y5K1 396 aa10.86□□□□□ -0.67
USP49-204ENST00000423567 U3KQA8 63 aa10.86□□□□□ -0.67
USP49-204ENST00000423567 TCRBV7S2A1N4TA0A589 114 aa10.85□□□□□ -0.67
USP49-204ENST00000423567 C2orf81A6NN90 581 aa10.85□□□□□ -0.67
USP49-204ENST00000423567 FADS2P1A8MWK0 482 aa10.85□□□□□ -0.67
USP49-204ENST00000423567 B4DGG1 531 aa10.85□□□□□ -0.67
USP49-204ENST00000423567 GPR89AB7ZAQ6 455 aa10.85□□□□□ -0.67
USP49-204ENST00000423567 AURKAO14965 403 aa10.85□□□□□ -0.67
USP49-204ENST00000423567 STX7O15400 261 aaKnown RBP10.85□□□□□ -0.67
USP49-204ENST00000423567 PSMD3O43242 534 aa10.85□□□□□ -0.67
USP49-204ENST00000423567 ZW10O43264 779 aa10.85□□□□□ -0.67
USP49-204ENST00000423567 AGTP01019 485 aa10.85□□□□□ -0.67
USP49-204ENST00000423567 ATP1A1P05023 1023 aaKnown RBP10.85□□□□□ -0.67
USP49-204ENST00000423567 GPR89BP0CG08 455 aa10.85□□□□□ -0.67
USP49-204ENST00000423567 BPIP17213 487 aa10.85□□□□□ -0.67
USP49-204ENST00000423567 MSNP26038 577 aaKnown RBP10.85□□□□□ -0.67
USP49-204ENST00000423567 SPAM1P38567 509 aa10.85□□□□□ -0.67
USP49-204ENST00000423567 ADCY8P40145 1251 aa10.85□□□□□ -0.67
USP49-204ENST00000423567 ACTR1BP42025 376 aa10.85□□□□□ -0.67
USP49-204ENST00000423567 PRSS12P56730 875 aa10.85□□□□□ -0.67
USP49-204ENST00000423567 ACTR1AP61163 376 aa10.85□□□□□ -0.67
USP49-204ENST00000423567 PDE1BQ01064 536 aa10.85□□□□□ -0.67
USP49-204ENST00000423567 INSM1Q01101 510 aaPredicted RBP10.85□□□□□ -0.67
USP49-204ENST00000423567 CTBSQ01459 385 aa10.85□□□□□ -0.67
USP49-204ENST00000423567 TARDBPQ13148 414 aaKnown RBP eCLIP10.85□□□□□ -0.67
USP49-204ENST00000423567 PYCR3Q53H96 274 aa10.85□□□□□ -0.67
USP49-204ENST00000423567 SLC30A9Q6PML9 568 aa10.85□□□□□ -0.67
USP49-204ENST00000423567 CACTIN-AS1Q8N1I8 211 aa10.85□□□□□ -0.67
USP49-204ENST00000423567 CCL4L1Q8NHW4 92 aa10.85□□□□□ -0.67
USP49-204ENST00000423567 GDAP1Q8TB36 358 aa10.85□□□□□ -0.67
USP49-204ENST00000423567 ZDHHC1Q8WTX9 485 aa10.85□□□□□ -0.67
USP49-204ENST00000423567 ATG4AQ8WYN0 398 aa10.85□□□□□ -0.67
USP49-204ENST00000423567 EID2BQ96D98 161 aa10.85□□□□□ -0.67
USP49-204ENST00000423567 SCARF2Q96GP6 870 aaPredicted RBP10.85□□□□□ -0.67
USP49-204ENST00000423567 WDR24Q96S15 920 aa10.85□□□□□ -0.67
USP49-204ENST00000423567 CCDC3Q9BQI4 270 aa10.85□□□□□ -0.67
USP49-204ENST00000423567 SYNDIG1Q9H7V2 258 aa10.85□□□□□ -0.67
USP49-204ENST00000423567 LRRC40Q9H9A6 602 aa10.85□□□□□ -0.67
USP49-204ENST00000423567 TAAR2Q9P1P5 351 aa10.85□□□□□ -0.67
USP49-204ENST00000423567 LRRK1Q38SD2 2015 aa10.85□□□□□ -0.67
USP49-204ENST00000423567 GLYATL1P3A0A0U1RQE8 302 aa10.84□□□□□ -0.67
USP49-204ENST00000423567 LIASO43766 372 aa10.84□□□□□ -0.67
USP49-204ENST00000423567 CEP104O60308 925 aa10.84□□□□□ -0.67
USP49-204ENST00000423567 TCEA3O75764 348 aa10.84□□□□□ -0.67
USP49-204ENST00000423567 CRTAMO95727 393 aa10.84□□□□□ -0.67
USP49-204ENST00000423567 IFNB1P01574 187 aa10.84□□□□□ -0.67
USP49-204ENST00000423567 FUCA1P04066 466 aa10.84□□□□□ -0.67
USP49-204ENST00000423567 GLB1P16278 677 aa10.84□□□□□ -0.67
USP49-204ENST00000423567 AK4P27144 223 aaPredicted RBP10.84□□□□□ -0.67
USP49-204ENST00000423567 LMAN1P49257 510 aa10.84□□□□□ -0.67
USP49-204ENST00000423567 CLDN6P56747 220 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms