RNA–Protein interactions for RNA: ENST00000422029.6

NDUFA3-208, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-208ENST00000422029 PRDM8Q9NQV8 689 aa11.25□□□□□ -0.61
NDUFA3-208ENST00000422029 TRIM10Q9UDY6 481 aa11.25□□□□□ -0.61
NDUFA3-208ENST00000422029 PPIL1Q9Y3C6 166 aa11.25□□□□□ -0.61
NDUFA3-208ENST00000422029 BZW2Q9Y6E2 419 aaKnown RBP11.25□□□□□ -0.61
NDUFA3-208ENST00000422029 AHCTF1Q8WYP5 2266 aa11.25□□□□□ -0.61
NDUFA3-208ENST00000422029 KALRNO60229 2985 aa11.25□□□□□ -0.61
NDUFA3-208ENST00000422029 A0A1W2PQJ5 194 aa11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 LRRD1A4D1F6 860 aa11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 GOLGA6L19H0YKK7 550 aa11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 DNAJC6O75061 913 aa11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 MMP2P08253 660 aa11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 LIFP15018 202 aa11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 KDELR1P24390 212 aa11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 CCNCP24863 283 aa11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 NFKBIAP25963 317 aa11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 CSTF2P33240 577 aaKnown RBP eCLIP11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 TPM4P67936 248 aa11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 AP1B1Q10567 949 aa11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 SEPT7Q16181 437 aaKnown RBP11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 TMEM164Q5U3C3 297 aa11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 PTRH1Q86Y79 214 aaKnown RBP11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 CCDC13Q8IYE1 715 aa11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 IL22RA1Q8N6P7 574 aa11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 FAM71BQ8TC56 605 aa11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 SYN2Q92777 582 aaPredicted RBP11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 NKD1Q969G9 470 aa11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 EID2BQ96D98 161 aa11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 SCARF2Q96GP6 870 aaPredicted RBP11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 COX14Q96I36 57 aa11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 AGAP3Q96P47 875 aa11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 TAAR9Q96RI9 348 aa11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 TBC1D10AQ9BXI6 508 aa11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 FAM117AQ9C073 453 aa11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 XPO4Q9C0E2 1151 aaKnown RBP11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 OR2AG1Q9H205 316 aa11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 OSGEPL1Q9H4B0 414 aa11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 FAM83DQ9H4H8 585 aa11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 APMAPQ9HDC9 416 aa11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 SPTLC3Q9NUV7 552 aa11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 UBP1Q9NZI7 540 aa11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 ATXN10Q9UBB4 475 aa11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 HEMK1Q9Y5R4 338 aaPredicted RBP11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 SDK2Q58EX2 2172 aa11.24□□□□□ -0.61
NDUFA3-208ENST00000422029 PRKAR1AP10644 381 aa11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 THRAP10827 490 aa11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 ZNF8P17098 575 aaPredicted RBP11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 TYRP1P17643 537 aa11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 UGT1A3P35503 534 aa11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 NOP2P46087 812 aaKnown RBP11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 SPINT3P49223 89 aa11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 NOMO1Q15155 1222 aa11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 RALGPS1Q5JS13 557 aa11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 TIGD7Q6NT04 549 aaPredicted RBP11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 IYDQ6PHW0 289 aa11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 DTX1Q86Y01 620 aa11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 SFRP1Q8N474 314 aa11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 ZSCAN1Q8NBB4 408 aa11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 AGBL5Q8NDL9 886 aa11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 GPR26Q8NDV2 337 aa11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 OR4D9Q8NGE8 314 aa11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 SPATA22Q8NHS9 363 aa11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 CTNNBL1Q8WYA6 563 aaPredicted RBP11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 TMEM159Q96B96 161 aa11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 ELMO2Q96JJ3 720 aa11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 TSGA13Q96PP4 275 aa11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 RNF157Q96PX1 679 aa11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 CHP1Q99653 195 aa11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 MLPHQ9BV36 600 aaPredicted RBP11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 SPATA16Q9BXB7 569 aa11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 BPIFA1Q9NP55 256 aa11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 SCHIP1Q9P0W5 487 aaPredicted RBP11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 RCOR3Q9P2K3 495 aaPredicted RBP11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 SAE1Q9UBE0 346 aaPredicted RBP11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 SLC23A2Q9UGH3 650 aa11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 ACSL6Q9UKU0 697 aa11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 NENFQ9UMX5 172 aa11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 DNAJC16Q9Y2G8 782 aa11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 SETXQ7Z333 2677 aaKnown RBP11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 ZFC3H1O60293 1989 aaKnown RBP11.23□□□□□ -0.61
NDUFA3-208ENST00000422029 ANKRD66B4E2M5 251 aa11.22□□□□□ -0.61
NDUFA3-208ENST00000422029 STMND1H3BQB6 276 aa11.22□□□□□ -0.61
NDUFA3-208ENST00000422029 AURKAO14965 403 aa11.22□□□□□ -0.61
NDUFA3-208ENST00000422029 NKX2-8O15522 239 aa11.22□□□□□ -0.61
NDUFA3-208ENST00000422029 GRID2O43424 1007 aa11.22□□□□□ -0.61
NDUFA3-208ENST00000422029 PMPCBO75439 489 aa11.22□□□□□ -0.61
NDUFA3-208ENST00000422029 KRT1P04264 644 aa11.22□□□□□ -0.61
NDUFA3-208ENST00000422029 H2AFZP0C0S5 128 aa11.22□□□□□ -0.61
NDUFA3-208ENST00000422029 ZNF30P17039 623 aa11.22□□□□□ -0.61
NDUFA3-208ENST00000422029 ITGB6P18564 788 aa11.22□□□□□ -0.61
NDUFA3-208ENST00000422029 TEAD1P28347 426 aa11.22□□□□□ -0.61
NDUFA3-208ENST00000422029 GPR3P46089 330 aa11.22□□□□□ -0.61
NDUFA3-208ENST00000422029 HHEXQ03014 270 aa11.22□□□□□ -0.61
NDUFA3-208ENST00000422029 NR1D2Q14995 579 aa11.22□□□□□ -0.61
NDUFA3-208ENST00000422029 PDK2Q15119 407 aa11.22□□□□□ -0.61
NDUFA3-208ENST00000422029 ATP1A1-AS1Q5TC04 95 aa11.22□□□□□ -0.61
NDUFA3-208ENST00000422029 TMEM71Q6P5X7 295 aa11.22□□□□□ -0.61
NDUFA3-208ENST00000422029 H2AFVQ71UI9 128 aa11.22□□□□□ -0.61
NDUFA3-208ENST00000422029 ZNF765Q7L2R6 523 aa11.22□□□□□ -0.61
NDUFA3-208ENST00000422029 RFX6Q8HWS3 928 aa11.22□□□□□ -0.61
NDUFA3-208ENST00000422029 CACNA2D3Q8IZS8 1091 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms